FFCP PHASE1:Hg19::chr5:134734940..134734958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9555 | |EntrezGene=9555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4740 | |HGNC=4740 | ||
|TSSclassifier=S | |||
|UniProt=D6RCF2,O75367 | |UniProt=D6RCF2,O75367 | ||
|association_with_transcript=-12bp_to_ENST00000506671,NM_001040158,NM_138609,NM_138610,uc003lam.1,uc003lan.1,uc003lao.1,uc003lap.1,uc003laq.1,uc003lar.1,uc011cxz.1_5end | |association_with_transcript=-12bp_to_ENST00000506671,NM_001040158,NM_138609,NM_138610,uc003lam.1,uc003lan.1,uc003lao.1,uc003lap.1,uc003laq.1,uc003lar.1,uc011cxz.1_5end |
Revision as of 01:34, 10 July 2013
Short description: | p2@H2AFY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_H2AFY_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000506671, NM_001040158, NM_138609, NM_138610, uc003lam.1, uc003lan.1, uc003lao.1, uc003lap.1, uc003laq.1, uc003lar.1, uc011cxz.1_5end |
EntrezGene: | H2AFY |
HGNC: | 4740 |
UniProt: | D6RCF2O75367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@H2AFY |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.19e-17 | 253 |
myeloid cell | 2.13e-13 | 108 |
common myeloid progenitor | 2.13e-13 | 108 |
endodermal cell | 1.09e-09 | 58 |
macrophage dendritic cell progenitor | 3.38e-09 | 61 |
monopoietic cell | 1.22e-08 | 59 |
monocyte | 1.22e-08 | 59 |
monoblast | 1.22e-08 | 59 |
promonocyte | 1.22e-08 | 59 |
granulocyte monocyte progenitor cell | 1.79e-08 | 67 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
bone element | 7.95e-09 | 82 |
bone marrow | 1.80e-08 | 76 |
skeletal element | 1.79e-07 | 90 |
respiratory primordium | 7.02e-07 | 38 |
endoderm of foregut | 7.02e-07 | 38 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
cancer | 4.32e-19 | 235 |
disease of cellular proliferation | 8.56e-19 | 239 |
carcinoma | 2.05e-12 | 106 |
cell type cancer | 8.99e-12 | 143 |
organ system cancer | 1.04e-10 | 137 |
myeloid leukemia | 4.92e-08 | 31 |
leukemia | 1.64e-07 | 39 |
Showing 1 to 7 of 7 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.