FFCP PHASE1:Hg19::chr9:126131131..126131159,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=286204 | |EntrezGene=286204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18688 | |HGNC=18688 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000373629_5end | |association_with_transcript=-8bp_to_ENST00000373629_5end | ||
Revision as of 21:06, 10 July 2013
| Short description: | p3@CRB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_CRB2_5end |
| Coexpression cluster: | C655_mesothelioma_Mesothelial_hepatoma_cholangiocellular_Urothelial_glioma_serous |
| Association with transcript: | -8bp_to_ENST00000373629_5end |
| EntrezGene: | CRB2 |
| HGNC: | 18688 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CRB2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesangial cell | 9.84e-37 | 2 |
| kidney interstitial cell | 9.84e-37 | 2 |
| juxtaglomerular complex cell | 9.84e-37 | 2 |
| renal interstitial pericyte | 9.84e-37 | 2 |
| extraglomerular mesangial cell | 9.84e-37 | 2 |
| pericyte cell | 6.18e-19 | 4 |
| mesothelial cell | 1.29e-15 | 19 |
| glomerular cell | 2.98e-11 | 7 |
| kidney corpuscule cell | 2.98e-11 | 7 |
| cortical cell of adrenal gland | 1.43e-10 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| abdomen connective tissue | 9.84e-37 | 2 |
| abdominal segment connective tissue | 9.84e-37 | 2 |
| trunk connective tissue | 9.84e-37 | 2 |
| interstitial tissue | 9.84e-37 | 2 |
| extraglomerular mesangium | 9.84e-37 | 2 |
| kidney interstitium | 9.84e-37 | 2 |
| juxtaglomerular apparatus | 9.84e-37 | 2 |
| mesangium | 9.84e-37 | 2 |
| stroma | 6.18e-19 | 4 |
| cortex | 1.58e-11 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
