FFCP PHASE1:Hg19::chr9:129376233..129376251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4010 | |EntrezGene=4010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6654 | |HGNC=6654 | ||
|TSSclassifier=W | |||
|UniProt=F8W7W6,O60663,F8VYP0,B7ZLH2,Q6ISE0 | |UniProt=F8W7W6,O60663,F8VYP0,B7ZLH2,Q6ISE0 | ||
|association_with_transcript=-470bp_to_ENST00000355497,ENST00000373474,ENST00000425646,ENST00000526117,NM_001174146,NM_001174147,NM_002316_5end | |association_with_transcript=-470bp_to_ENST00000355497,ENST00000373474,ENST00000425646,ENST00000526117,NM_001174146,NM_001174147,NM_002316_5end | ||
Revision as of 21:12, 10 July 2013
| Short description: | p2@LMX1B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_LMX1B_5end |
| Coexpression cluster: | C4801_Trabecular_Wilms_parotid_MCF7_salivary_breast_submaxillary |
| Association with transcript: | -470bp_to_ENST00000355497, ENST00000373474, ENST00000425646, ENST00000526117, NM_001174146, NM_001174147, NM_002316_5end |
| EntrezGene: | LMX1B |
| HGNC: | 6654 |
| UniProt: | F8W7W6O60663F8VYP0B7ZLH2Q6ISE0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@LMX1B |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trabecular meshwork cell | 1.15e-09 | 2 |
| mammary gland epithelial cell | 2.65e-09 | 4 |
| keratocyte | 4.42e-09 | 2 |
| migratory cranial neural crest cell | 4.42e-09 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| reticulum trabeculare | 1.15e-09 | 2 |
| aqueous drainage system | 1.15e-09 | 2 |
| major salivary gland | 1.36e-09 | 2 |
| stroma | 1.77e-09 | 4 |
| mammary gland | 2.65e-09 | 4 |
| mammary bud | 2.65e-09 | 4 |
| mammary ridge | 2.65e-09 | 4 |
| mammary placode | 2.65e-09 | 4 |
| head connective tissue | 4.42e-09 | 2 |
| substantia propria of cornea | 4.42e-09 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| thoracic cancer | 3.15e-10 | 4 |
| breast cancer | 3.15e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
