FFCP PHASE1:Hg19::chr10:102268607..102268622,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25956|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23197|TSSclassifier=S|UniProt=|association_with_transcript=-57bp_to_ENST00000484848,uc001krg.1_5end|coexpression_cluster_id=C1100|description=CAGE_peak_4_at_SEC31B_5end|id=chr10:102268607..102268622,-|ontology_enrichment_celltype=CL:0000084!1.20e-38!25;CL:0000827!1.20e-38!25;CL:0000838!8.46e-17!52;CL:0000542!2.03e-16!53;CL:0000051!2.03e-16!53;CL:0000791!2.96e-15!18;CL:0000789!2.96e-15!18;CL:0002420!2.96e-15!18;CL:0002419!2.96e-15!18;CL:0000790!2.96e-15!18;CL:0000625!1.84e-14!11;CL:0000080!1.35e-12!6|ontology_enrichment_celltype_v019=CL:0002127;3.08e-14;1!CL:0000911;3.08e-14;1!CL:0000814;3.08e-14;1!CL:0000084;1.58e-12;25|ontology_enrichment_celltype_v019_2=CL:0002127,3.08e-14,1;CL:0000914,3.08e-14,1;CL:0000911,3.08e-14,1;CL:0000814,3.08e-14,1;CL:0002042,3.08e-14,1;CL:0002039,3.08e-14,1;CL:0002040,3.08e-14,1;CL:0002041,3.08e-14,1;CL:0000084,1.70e-12,25;CL:0000827,1.70e-12,25;CL:0000893,9.25e-08,2;CL:0002489,9.25e-08,2;CL:0000809,9.25e-08,2;CL:0000808,9.25e-08,2;CL:0000894,9.25e-08,2;CL:0000806,9.25e-08,2;CL:0000807,9.25e-08,2;CL:0000805,9.25e-08,2;CL:0002425,9.25e-08,2|ontology_enrichment_development_v019=CL:0002425;9.25e-08;2|ontology_enrichment_disease=DOID:0060058!8.12e-08!10|ontology_enrichment_disease_v019=DOID:0060058;6.87e-12;10|ontology_enrichment_disease_v019_2=DOID:0060058,7.00e-12,10;DOID:2531,1.57e-08,51;DOID:0060083,1.57e-08,51|ontology_enrichment_uberon=UBERON:0002370!1.88e-11!4;UBERON:0005058!1.88e-11!4;UBERON:0009113!1.88e-11!4;UBERON:0003295!1.88e-11!4;UBERON:0005562!1.88e-11!4;UBERON:0004177!6.19e-11!7;UBERON:0003351!9.01e-08!6;UBERON:0001042!1.22e-07!10;UBERON:0009145!1.22e-07!10;UBERON:0000178!1.86e-07!15;UBERON:0000179!1.86e-07!15;UBERON:0000463!1.86e-07!15;UBERON:0006562!6.00e-07!11|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,5.18278135711102,0,0.473447805734733,0,1.78256731016278,0,0,0,2.5618263945135,2.9913649938772,1.31550323682941,0.276350017785848,2.02862160014537,0.444859689486181,0,0,3.05935225283429,0,0,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0,0,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5360035353916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.782560276832555,7.65246109098347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,6.42735109484362,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,2.7161842980502,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,1.23563938946503,1.04421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581300188524055,0.993195428733726,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p4@SEC31B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=25956 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23197 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_ENST00000484848,uc001krg.1_5end | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_4_at_SEC31B_5end | |||
|id=chr10:102268607..102268622,- | |||
|ontology_enrichment_celltype=CL:0000084!1.20e-38!25;CL:0000827!1.20e-38!25;CL:0000838!8.46e-17!52;CL:0000542!2.03e-16!53;CL:0000051!2.03e-16!53;CL:0000791!2.96e-15!18;CL:0000789!2.96e-15!18;CL:0002420!2.96e-15!18;CL:0002419!2.96e-15!18;CL:0000790!2.96e-15!18;CL:0000625!1.84e-14!11;CL:0000080!1.35e-12!6 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.08e-14;1!CL:0000911;3.08e-14;1!CL:0000814;3.08e-14;1!CL:0000084;1.58e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.08e-14,1;CL:0000914,3.08e-14,1;CL:0000911,3.08e-14,1;CL:0000814,3.08e-14,1;CL:0002042,3.08e-14,1;CL:0002039,3.08e-14,1;CL:0002040,3.08e-14,1;CL:0002041,3.08e-14,1;CL:0000084,1.70e-12,25;CL:0000827,1.70e-12,25;CL:0000893,9.25e-08,2;CL:0002489,9.25e-08,2;CL:0000809,9.25e-08,2;CL:0000808,9.25e-08,2;CL:0000894,9.25e-08,2;CL:0000806,9.25e-08,2;CL:0000807,9.25e-08,2;CL:0000805,9.25e-08,2;CL:0002425,9.25e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;9.25e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.12e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.87e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.00e-12,10;DOID:2531,1.57e-08,51;DOID:0060083,1.57e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.88e-11!4;UBERON:0005058!1.88e-11!4;UBERON:0009113!1.88e-11!4;UBERON:0003295!1.88e-11!4;UBERON:0005562!1.88e-11!4;UBERON:0004177!6.19e-11!7;UBERON:0003351!9.01e-08!6;UBERON:0001042!1.22e-07!10;UBERON:0009145!1.22e-07!10;UBERON:0000178!1.86e-07!15;UBERON:0000179!1.86e-07!15;UBERON:0000463!1.86e-07!15;UBERON:0006562!6.00e-07!11 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,5.18278135711102,0,0.473447805734733,0,1.78256731016278,0,0,0,2.5618263945135,2.9913649938772,1.31550323682941,0.276350017785848,2.02862160014537,0.444859689486181,0,0,3.05935225283429,0,0,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0,0,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5360035353916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.782560276832555,7.65246109098347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,6.42735109484362,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,2.7161842980502,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,1.23563938946503,1.04421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581300188524055,0.993195428733726,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@SEC31B | |||
}} |
Revision as of 11:19, 10 September 2013
Short description: | p4@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SEC31B_5end |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | -57bp_to_ENST00000484848, uc001krg.1_5end |
EntrezGene: | SEC31B |
HGNC: | 23197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.08e-14 | 1 |
immature NK T cell | 3.08e-14 | 1 |
effector T cell | 3.08e-14 | 1 |
mature NK T cell | 3.08e-14 | 1 |
immature NK T cell stage IV | 3.08e-14 | 1 |
immature NK T cell stage I | 3.08e-14 | 1 |
immature NK T cell stage II | 3.08e-14 | 1 |
immature NK T cell stage III | 3.08e-14 | 1 |
T cell | 1.70e-12 | 25 |
pro-T cell | 1.70e-12 | 25 |
thymocyte | 9.25e-08 | 2 |
double negative thymocyte | 9.25e-08 | 2 |
double-positive, alpha-beta thymocyte | 9.25e-08 | 2 |
DN4 thymocyte | 9.25e-08 | 2 |
DN1 thymic pro-T cell | 9.25e-08 | 2 |
DN2 thymocyte | 9.25e-08 | 2 |
DN3 thymocyte | 9.25e-08 | 2 |
immature single positive thymocyte | 9.25e-08 | 2 |
early T lineage precursor | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.00e-12 | 10 |
hematologic cancer | 1.57e-08 | 51 |
immune system cancer | 1.57e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.