FFCP PHASE1:Hg19::chr10:123804015..123804053,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:123804015..123804053,+|id=chr10:123804015..123804053,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;4.08e-09;5!CL:0000182;6.48e-07;12|ontology_enrichment_celltype_v019_2=CL:0002322,3.07e-09,5;CL:0000182,7.78e-07,12|ontology_enrichment_development_v019=UBERON:0003104;9.37e-11;31!UBERON:0004161;2.61e-09;11!UBERON:0009497;1.23e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.28e-30!115;UBERON:0000481!3.96e-15!347;UBERON:0004921!1.50e-10!129;UBERON:0004185!1.50e-10!129;UBERON:0001007!5.53e-10!155;UBERON:0001555!5.53e-10!155;UBERON:0007026!5.53e-10!155;UBERON:0000477!3.91e-09!286;UBERON:0000062!1.98e-08!511;UBERON:0004119!2.57e-08!169;UBERON:0000925!2.57e-08!169;UBERON:0006595!2.57e-08!169;UBERON:0005743!3.19e-08!86;UBERON:0000468!3.37e-08!659;UBERON:0001041!3.52e-08!98;UBERON:0000922!3.80e-08!612;UBERON:0003075!5.08e-08!86;UBERON:0007284!5.08e-08!86;UBERON:0001049!5.84e-08!57;UBERON:0005068!5.84e-08!57;UBERON:0006241!5.84e-08!57;UBERON:0007135!5.84e-08!57;UBERON:0000077!5.91e-08!130;UBERON:0001017!6.01e-08!82;UBERON:0001737!6.64e-08!9;UBERON:0000153!9.27e-08!129;UBERON:0007811!9.27e-08!129;UBERON:0002616!2.41e-07!59;UBERON:0002346!3.77e-07!90;UBERON:0000073!3.85e-07!94;UBERON:0001016!3.85e-07!94;UBERON:0003080!6.61e-07!42;UBERON:0001557!6.89e-07!19;UBERON:0000955!7.42e-07!69;UBERON:0006238!7.42e-07!69;UBERON:0000033!8.07e-07!123;UBERON:0000475!9.02e-07!365;UBERON:0002530!9.61e-07!59|ontology_enrichment_uberon_v019=UBERON:0003296;7.04e-09;4!UBERON:0010133;7.04e-09;4!UBERON:0001737;4.52e-08;9!UBERON:0001557;4.52e-08;9!UBERON:0000922;7.82e-08;49!UBERON:0002368;6.35e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.28e-21,114;UBERON:0004921,2.06e-09,118;UBERON:0003296,6.82e-09,4;UBERON:0010133,6.82e-09,4;UBERON:0001737,3.05e-08,9;UBERON:0001007,1.06e-07,145;UBERON:0001555,1.06e-07,145;UBERON:0007026,1.06e-07,145;UBERON:0011216,1.88e-07,223;UBERON:0002368,4.18e-07,35|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,1.32558950291166,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.869079113764942,0,0,0.378139268656271,0.221729397462564,0.614843499851882,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0.169560592310488,0,0,0,3.29329006549908,5.03613119621644,1.97529702878181,4.04278114559945,2.52320850875628,4.74470566798579,0,0,0,0,0,1.30137480043828,1.85443159085912,0.964044119533928,1.65440959098591,1.74303555273925,2.60997681022206,0.808987848960987,2.35465758150415,2.30848294167834,0,0,0,0,16.478154526838,0,3.54473944008842,0,6.27241036569879,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44585807502342,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,2.47298427954533,0.0915694648183434,0,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.255679882248303,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,1.2655176988749,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6670108032685,1.61158997199083,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,4.98119970627674,0.276283915531148,18.1391578455079,0,0,0,0.179736702294654,0,0,2.07151151837561,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,2.17499872630438,0,0,0,0,0.291604613383254,0,1.77148277162768,0.482385754501632,0,0,0,1.09692698576986,17.6480310900764,0,6.38687145581516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,7.96209544862804,5.74974169271705,7.94339188413713,0,0,0,1.41542379259422,3.21031058919516,0,0,0,0,1.18375320854817,1.20990716048664,0.30607276163049,0.884612114798832,0.150323419414493,0.725817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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:123804015..123804053,+ | |||
|id=chr10:123804015..123804053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.08e-09;5!CL:0000182;6.48e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.07e-09,5;CL:0000182,7.78e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;9.37e-11;31!UBERON:0004161;2.61e-09;11!UBERON:0009497;1.23e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.28e-30!115;UBERON:0000481!3.96e-15!347;UBERON:0004921!1.50e-10!129;UBERON:0004185!1.50e-10!129;UBERON:0001007!5.53e-10!155;UBERON:0001555!5.53e-10!155;UBERON:0007026!5.53e-10!155;UBERON:0000477!3.91e-09!286;UBERON:0000062!1.98e-08!511;UBERON:0004119!2.57e-08!169;UBERON:0000925!2.57e-08!169;UBERON:0006595!2.57e-08!169;UBERON:0005743!3.19e-08!86;UBERON:0000468!3.37e-08!659;UBERON:0001041!3.52e-08!98;UBERON:0000922!3.80e-08!612;UBERON:0003075!5.08e-08!86;UBERON:0007284!5.08e-08!86;UBERON:0001049!5.84e-08!57;UBERON:0005068!5.84e-08!57;UBERON:0006241!5.84e-08!57;UBERON:0007135!5.84e-08!57;UBERON:0000077!5.91e-08!130;UBERON:0001017!6.01e-08!82;UBERON:0001737!6.64e-08!9;UBERON:0000153!9.27e-08!129;UBERON:0007811!9.27e-08!129;UBERON:0002616!2.41e-07!59;UBERON:0002346!3.77e-07!90;UBERON:0000073!3.85e-07!94;UBERON:0001016!3.85e-07!94;UBERON:0003080!6.61e-07!42;UBERON:0001557!6.89e-07!19;UBERON:0000955!7.42e-07!69;UBERON:0006238!7.42e-07!69;UBERON:0000033!8.07e-07!123;UBERON:0000475!9.02e-07!365;UBERON:0002530!9.61e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;7.04e-09;4!UBERON:0010133;7.04e-09;4!UBERON:0001737;4.52e-08;9!UBERON:0001557;4.52e-08;9!UBERON:0000922;7.82e-08;49!UBERON:0002368;6.35e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.28e-21,114;UBERON:0004921,2.06e-09,118;UBERON:0003296,6.82e-09,4;UBERON:0010133,6.82e-09,4;UBERON:0001737,3.05e-08,9;UBERON:0001007,1.06e-07,145;UBERON:0001555,1.06e-07,145;UBERON:0007026,1.06e-07,145;UBERON:0011216,1.88e-07,223;UBERON:0002368,4.18e-07,35 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,1.32558950291166,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.869079113764942,0,0,0.378139268656271,0.221729397462564,0.614843499851882,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0.169560592310488,0,0,0,3.29329006549908,5.03613119621644,1.97529702878181,4.04278114559945,2.52320850875628,4.74470566798579,0,0,0,0,0,1.30137480043828,1.85443159085912,0.964044119533928,1.65440959098591,1.74303555273925,2.60997681022206,0.808987848960987,2.35465758150415,2.30848294167834,0,0,0,0,16.478154526838,0,3.54473944008842,0,6.27241036569879,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44585807502342,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,2.47298427954533,0.0915694648183434,0,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.255679882248303,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,1.2655176988749,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6670108032685,1.61158997199083,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,4.98119970627674,0.276283915531148,18.1391578455079,0,0,0,0.179736702294654,0,0,2.07151151837561,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,2.17499872630438,0,0,0,0,0.291604613383254,0,1.77148277162768,0.482385754501632,0,0,0,1.09692698576986,17.6480310900764,0,6.38687145581516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,7.96209544862804,5.74974169271705,7.94339188413713,0,0,0,1.41542379259422,3.21031058919516,0,0,0,0,1.18375320854817,1.20990716048664,0.30607276163049,0.884612114798832,0.150323419414493,0.72581733978073,0,0,0,0,0,0.693373365065693,0,0,0,3.84398670132466,0,1.54810130062536,1.68105429298227,0.739039113478883,1.74580229679155,0,1.80784592624426,0.137041924646751,0.19871461170299,0.316553979779393,0,0.400794101257669,2.13452994739353,0,1.87317542300338,0,12.1832448481995,1.4405479798815,0,1.17847017308398,0,0,0,0,0,0.273810757783986,0,0,0,1.67569440763353,2.97908551215189,0,10.5829870264465,17.1690419254628,3.57074331906996,2.35142153703542,0,2.32991899054908,6.38143776688512,5.35703079477582,6.06631894687664,1.27955725969173,0,0,0.681017030557878,0.643012593860077,1.37539436597234,1.24632101408756,0,0,0.182248669974074,0,1.41850273138557,3.09482069996489,0,0,0,1.42939065274673,6.62091970365432,0,0.542999601753713,0,0,1.19730191562487,0,0,0,2.05173127149315,1.32506888912221,0.517131825446202,0.13223260174269,0.513260513652988,0.704815022316672,0.854299300541557,2.98688179689365,0.414239055347196,0,0,0,0,2.1760712134779,6.5179372445902,3.982492497925,4.26234419922746,0,0,0,0.250381861413,3.44045517414043,2.66229723688445,1.24192805882767,3.597064508342,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,1.41070377476274,0,0.513833800771676,0,0.159633859057151,0.205116364240755,0,0.276629009856872,0,0,0,0.11796972334774,0,0,0,0,0,1.42899623863589,0,9.37816813479711,0,0.163771917510097,0.147856086217045,0.270150338473579,0,0,0.126831620387814,0,2.19303106742873,6.94695649745012,0,0,7.49982570229601,16.8141861109412,6.67662164660295,7.96817669729542,0.177404740325278,0,0.171488009437418,0,0.197318320688547,0,0.222462803784138,2.59027206406696,0.314231179832004,0,2.73947616152849,0,0,2.43020250200632,0.94808167039636,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,1.72090943528111,0,0,0.846774100381858,0,0,0,0,0,0,25.2497246503279,19.1979448821182,27.8355463521168,3.88568794447312,0.233939463462106,1.98950775161368,0,0,0.879524133963433,2.56636834063345,1.85217979459067,3.0598338470554,25.8674512998838,4.90296643507811,0,0,0.594092800654172,0.42265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| |||
|short_description=p@chr10:123804015..123804053,+ | |||
}} |
Revision as of 12:06, 10 September 2013
Short description: | p@chr10:123804015..123804053, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:123804015..123804053, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.07e-09 | 5 |
hepatocyte | 7.78e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.28e-21 | 114 |
subdivision of digestive tract | 2.06e-09 | 118 |
gland of diencephalon | 6.82e-09 | 4 |
neuroendocrine gland | 6.82e-09 | 4 |
larynx | 3.05e-08 | 9 |
digestive system | 1.06e-07 | 145 |
digestive tract | 1.06e-07 | 145 |
primitive gut | 1.06e-07 | 145 |
organ system subdivision | 1.88e-07 | 223 |
endocrine gland | 4.18e-07 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.