FFCP PHASE1:Hg19::chr10:22725930..22725941,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100289455|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=B7Z3C9|association_with_transcript=-67bp_to_AK295718_5end|description=CAGE_peak_3_at_LOC100289455_5end|id=chr10:22725930..22725941,+|ontology_enrichment_celltype=CL:0000738!5.35e-12!140;CL:0002031!3.96e-11!124;CL:0002087!1.50e-10!119;CL:0002057!1.24e-09!42;CL:0000860!2.14e-08!45;CL:0000988!6.42e-08!182;CL:0000037!7.82e-08!172;CL:0000566!7.82e-08!172;CL:0002032!4.48e-07!165;CL:0000837!4.48e-07!165;CL:0000839!4.95e-07!70;CL:0000766!5.34e-07!76|ontology_enrichment_celltype_v019=CL:0000097;3.02e-34;5!CL:0000163;3.48e-19;9!CL:0000860;4.09e-10;33!CL:0002057;4.09e-10;33!CL:0000766;1.83e-09;69!CL:0000473;2.97e-07;39!CL:0000234;2.97e-07;39|ontology_enrichment_celltype_v019_2=CL:0000097,1.29e-34,5;CL:0002028,1.29e-34,5;CL:0002031,7.04e-20,120;CL:0000163,2.18e-19,9;CL:0000839,1.69e-17,66;CL:0000738,2.71e-17,136;CL:0000557,3.22e-17,67;CL:0000766,6.21e-16,72;CL:0002032,2.86e-14,161;CL:0000837,2.86e-14,161;CL:0000037,1.39e-13,168;CL:0000988,8.89e-13,177;CL:0000860,1.44e-11,42;CL:0002057,1.44e-11,42;CL:0002087,3.96e-11,115;CL:0000763,3.81e-10,108;CL:0000049,3.81e-10,108;CL:0000473,4.87e-10,48;CL:0000234,4.87e-10,48;CL:0002194,6.80e-08,59;CL:0000576,6.80e-08,59;CL:0000040,6.80e-08,59;CL:0000559,6.80e-08,59;CL:0002009,1.29e-07,61|ontology_enrichment_development_v019=CL:0002057;2.15e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.04e-15,76;UBERON:0001474,7.98e-14,82;UBERON:0004765,1.81e-12,90;UBERON:0002405,5.07e-12,93;UBERON:0002390,2.47e-11,98;UBERON:0003061,2.47e-11,98;UBERON:0001434,4.46e-11,100;UBERON:0002193,3.81e-10,108|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.626909442956176,0.572471974262113,0,0,0.0764134057479513,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0,0,0,0,0,0.464858073811369,0,0,0.575384784644301,0,0.709446689665756,1.37898272294647,0,5.41705946377367,0.564727018627814,0,0,1.22433556948361,0.962787081228281,0.639337125799041,0,0.199463657621632,0.852449501065388,0.290209238628584,0,0.622822248995575,1.25624332628372,0.521482918420201,0.868755378820466,1.81619850790011,1.10483290796269,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0,0,0.285012743741249,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,1.20118796110804,1.14950487990897,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0.167186495390678,0.32592226663359,1.4203434172042,0,0.111410456885174,0.294605907474837,0.664601683750863,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0.821127996921047,1.20964045934839,1.06976078313403,0,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.567208902984407,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0,0,0.404132016209064,0,0.454072282934794,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0.325808305310325,0,1.44331342025273,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,2.28060927094849,1.72943944100354,2.5248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.862510299438069,1.15508732651774,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.553107505625109,0.173767228936166,0.391602314925481,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.6380635624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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100289455 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=B7Z3C9 | |||
|association_with_transcript=-67bp_to_AK295718_5end | |||
|description=CAGE_peak_3_at_LOC100289455_5end | |||
|id=chr10:22725930..22725941,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.35e-12!140;CL:0002031!3.96e-11!124;CL:0002087!1.50e-10!119;CL:0002057!1.24e-09!42;CL:0000860!2.14e-08!45;CL:0000988!6.42e-08!182;CL:0000037!7.82e-08!172;CL:0000566!7.82e-08!172;CL:0002032!4.48e-07!165;CL:0000837!4.48e-07!165;CL:0000839!4.95e-07!70;CL:0000766!5.34e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.02e-34;5!CL:0000163;3.48e-19;9!CL:0000860;4.09e-10;33!CL:0002057;4.09e-10;33!CL:0000766;1.83e-09;69!CL:0000473;2.97e-07;39!CL:0000234;2.97e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.29e-34,5;CL:0002028,1.29e-34,5;CL:0002031,7.04e-20,120;CL:0000163,2.18e-19,9;CL:0000839,1.69e-17,66;CL:0000738,2.71e-17,136;CL:0000557,3.22e-17,67;CL:0000766,6.21e-16,72;CL:0002032,2.86e-14,161;CL:0000837,2.86e-14,161;CL:0000037,1.39e-13,168;CL:0000988,8.89e-13,177;CL:0000860,1.44e-11,42;CL:0002057,1.44e-11,42;CL:0002087,3.96e-11,115;CL:0000763,3.81e-10,108;CL:0000049,3.81e-10,108;CL:0000473,4.87e-10,48;CL:0000234,4.87e-10,48;CL:0002194,6.80e-08,59;CL:0000576,6.80e-08,59;CL:0000040,6.80e-08,59;CL:0000559,6.80e-08,59;CL:0002009,1.29e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.04e-15,76;UBERON:0001474,7.98e-14,82;UBERON:0004765,1.81e-12,90;UBERON:0002405,5.07e-12,93;UBERON:0002390,2.47e-11,98;UBERON:0003061,2.47e-11,98;UBERON:0001434,4.46e-11,100;UBERON:0002193,3.81e-10,108 | |||
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| |||
|short_description=p3@LOC100289455 | |||
}} |
Revision as of 12:51, 10 September 2013
Short description: | p3@LOC100289455 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC100289455_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_AK295718_5end |
EntrezGene: | LOC100289455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.29e-34 | 5 |
basophil mast progenitor cell | 1.29e-34 | 5 |
hematopoietic lineage restricted progenitor cell | 7.04e-20 | 120 |
endocrine cell | 2.18e-19 | 9 |
myeloid lineage restricted progenitor cell | 1.69e-17 | 66 |
leukocyte | 2.71e-17 | 136 |
granulocyte monocyte progenitor cell | 3.22e-17 | 67 |
myeloid leukocyte | 6.21e-16 | 72 |
hematopoietic oligopotent progenitor cell | 2.86e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-14 | 161 |
hematopoietic stem cell | 1.39e-13 | 168 |
hematopoietic cell | 8.89e-13 | 177 |
classical monocyte | 1.44e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-11 | 42 |
nongranular leukocyte | 3.96e-11 | 115 |
myeloid cell | 3.81e-10 | 108 |
common myeloid progenitor | 3.81e-10 | 108 |
defensive cell | 4.87e-10 | 48 |
phagocyte | 4.87e-10 | 48 |
monopoietic cell | 6.80e-08 | 59 |
monocyte | 6.80e-08 | 59 |
monoblast | 6.80e-08 | 59 |
promonocyte | 6.80e-08 | 59 |
macrophage dendritic cell progenitor | 1.29e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.04e-15 | 76 |
bone element | 7.98e-14 | 82 |
skeletal element | 1.81e-12 | 90 |
immune system | 5.07e-12 | 93 |
hematopoietic system | 2.47e-11 | 98 |
blood island | 2.47e-11 | 98 |
skeletal system | 4.46e-11 | 100 |
hemolymphoid system | 3.81e-10 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.