FFCP PHASE1:Hg19::chr10:33221480..33221527,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=117bp_to_ENST00000464001_5end | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_7_at_ITGB1_5end | |||
|id=chr10:33221480..33221527,- | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-12!180;CL:0000057!1.96e-11!75;CL:0000222!8.49e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.86e-07;12!CL:0000077;4.12e-07;19!CL:0000134;9.28e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.91e-14,76;CL:0000680,8.25e-08,58;CL:0000056,8.25e-08,58;CL:0000355,8.25e-08,58;CL:0000222,2.11e-07,121;CL:0002334,2.69e-07,12;CL:0000187,6.12e-07,55;CL:0000077,6.83e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.03e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.76e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.66e-08!83;UBERON:0002329!9.66e-08!83;UBERON:0003077!9.66e-08!83;UBERON:0003059!9.66e-08!83;UBERON:0007282!9.66e-08!83;UBERON:0009618!9.66e-08!83;UBERON:0007285!9.66e-08!83;UBERON:0003102!2.16e-07!95;UBERON:0000486!3.57e-07!82;UBERON:0004290!7.39e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.46e-08,99;UBERON:0000486,1.38e-07,83;UBERON:0007524,1.91e-07,73;UBERON:0001134,1.98e-07,62;UBERON:0002036,1.98e-07,62;UBERON:0003082,1.98e-07,62;UBERON:0002329,2.18e-07,71;UBERON:0003059,2.18e-07,71;UBERON:0007282,2.18e-07,71;UBERON:0004290,2.18e-07,71;UBERON:0009618,2.18e-07,71;UBERON:0002385,3.43e-07,64;UBERON:0001015,3.43e-07,64;UBERON:0000383,3.43e-07,64;UBERON:0003077,4.55e-07,72;UBERON:0007285,4.55e-07,72 | |||
|phase1_expression=4.36028110249336,7.49351833618441,3.24195129420734,8.00586386825043,3.5756887554183,6.97870819280295,0,0,1.30592814099919,0.491467873003018,0.697801167972428,0,0.527533956456907,0.990130823680373,3.31397375727916,8.74022690387308,7.8350288643117,4.38186054232424,7.3189919818576,0,0.408001382488506,0.313454721478088,0,1.91624195102038,1.50651167513763,0,0.0821005894499457,0,0,0.383829398097213,0.464448369948228,1.83884244895785,0,1.10926203050036,0.232401601740905,0.426507697462265,0,0.553995408531877,0.802177789880567,0.217010870715852,0.223915474239924,0.647787332037959,0.515151135268373,0.726991193897824,1.13362783106643,1.69808842831471,2.09186133215116,2.87817521615278,1.85823822537062,1.7261543539329,0.512321413058201,0.945928919554341,1.72372840368309,1.93645405075148,0,1.88242339542605,0.818718450173537,1.12361742222542,2.14258724659632,0.641858054152187,0.639337125799041,0,1.39624560335142,0.852449501065388,4.64334781805734,6.24123747160254,3.11411124497787,2.26123798731069,2.08593167368081,0.65156653411535,3.63239701580021,1.10483290796269,0.632924774881769,0.633765858935825,0.637812899895131,0.628975936525128,0.561643155732475,0.150176892841506,0.48217676009124,0,0,0.365328307529268,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,1.02800749499755,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0.766440987203842,0.34362744548263,1.26509846009751,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.383959833463255,2.49861453104692,0,0,0.604820229674197,1.60464117470104,0,21.9426179682566,4.69490601792545,1.02290049474824,1.0843174571537,1.50401373190767,2.75208386025565,1.5905718941022,6.8128881842369,0.472674085820339,1.77383517970051,2.0202000709419,0.196468613246569,0.364295288292542,0,0.324547393654683,0.696518949197069,1.46253756570752,0.238490624305342,0,0,0.39752481473341,0,1.73570250803797,0.56530794192401,0.419499436209906,1.92582629358047,1.04497483268405,1.8089173141853,1.06729878806013,3.68192674041137,0.402829317109147,0.760272105718513,1.70843440283719,0.367663080345869,0,0.714397826272638,0.673588117878509,1.68917220724983,0,0,0.916008719652036,0,0,0,12.424298792383,2.65924074495618,3.17782033951725,11.7603014507014,4.965357350777,1.68203280042692,0,2.96001058100592,0.933633106199299,2.15537075311501,1.9615428373615,0.151357427644931,2.88087962239999,0.234321431833797,1.5608003841516,0,3.43731965269142,0.822041490506354,1.29498355494505,0.98315564691574,1.22492502752936,1.35117749042945,1.54988671763648,3.56400857184616,6.42894016124248,0,0,1.34668891163253,1.7516592782075,1.93944880838928,2.19488810440419,3.0648779579902,3.45547535485173,1.81491493056034,5.02290979928813,5.12537733164562,7.84148034290379,7.50227740211006,3.60683852334536,3.60696756063881,4.65292140828975,8.77636927654584,3.11798416515836,3.78650661366172,3.58994604704967,2.42469085228218,9.58525899794859,1.71278566986988,2.20428770003634,1.73934767846967,3.54569956768085,2.00763216772303,0.487894824518382,0.530119073285941,0.69716365721711,0.932949495138334,0.756962552626885,0,1.56449532329816,11.5783368874719,1.38134921352481,2.78620756819187,0.721879481669586,1.8929088006375,1.85443159085912,1.44606617930089,0.882351781859152,1.08939722046203,1.89816495288877,3.23595139584395,1.96221465125346,3.07797725557112,0,0,0.4115740113314,0,0,2.94848165003288,1.77236972004421,1.32438929824395,0.245976877086227,2.91665277507493,1.20725313949488,0,4.2222168412885,2.40729957412177,0.325808305310325,1.03993478527958,5.77325368101093,1.15930404975077,3.40485213283883,1.15493158208859,1.85194205030644,4.37584550139576,0,0,0.738651018262192,1.40402559083543,1.18904929830983,0,3.35964256397719,1.70130116690864,1.97028749946266,2.3250715081117,3.06706143332169,0,0.528290604079356,0.207328115540772,0.144119953416961,0,0.380987365753014,0.381988425558278,0,0,0.822619941626588,2.10240140490742,0.571652865261156,0.112131084345361,0.43596006883328,1.7601188597028,2.97324946242889,0,0,5.31876233169741,4.16029747645464,0.257207374262142,0,0,4.00338382242813,0,0.823240336780769,2.60588947434988,2.13235169245527,0.791951872933429,5.12446941001296,4.35766729300147,11.7968129594827,1.2162378064119,1.50677127429638,10.5416969741516,2.39624855491583,1.14861935834114,1.42636905040718,5.50168965336801,2.87666851570537,2.32779252211864,0.560425719967636,0.394061520403854,1.50939302401662,0.513372145118994,0.508189248444927,0,2.31986643833309,0.167516265334349,0.637938751653163,0.749007023947182,0,0,1.71768088406796,0.500170521059677,1.35632511849868,6.86303843051664,12.133171238207,3.94256037584837,7.49705055953364,0.601892199455438,0,2.0694614258501,3.32112799267718,2.02806085395873,2.78027566297865,0.195801157462741,0,0,0.215714200818617,0.533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| |||
|short_description=p7@ITGB1 | |||
}} |
Revision as of 13:13, 10 September 2013
Short description: | p7@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 117bp_to_ENST00000464001_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.91e-14 | 76 |
muscle precursor cell | 8.25e-08 | 58 |
myoblast | 8.25e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.25e-08 | 58 |
mesodermal cell | 2.11e-07 | 121 |
preadipocyte | 2.69e-07 | 12 |
muscle cell | 6.12e-07 | 55 |
mesothelial cell | 6.83e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.46e-08 | 99 |
multilaminar epithelium | 1.38e-07 | 83 |
dense mesenchyme tissue | 1.91e-07 | 73 |
skeletal muscle tissue | 1.98e-07 | 62 |
striated muscle tissue | 1.98e-07 | 62 |
myotome | 1.98e-07 | 62 |
somite | 2.18e-07 | 71 |
presomitic mesoderm | 2.18e-07 | 71 |
presumptive segmental plate | 2.18e-07 | 71 |
dermomyotome | 2.18e-07 | 71 |
trunk paraxial mesoderm | 2.18e-07 | 71 |
muscle tissue | 3.43e-07 | 64 |
musculature | 3.43e-07 | 64 |
musculature of body | 3.43e-07 | 64 |
paraxial mesoderm | 4.55e-07 | 72 |
presumptive paraxial mesoderm | 4.55e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.64e-10 | 14 |
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