UBERON:0003102
From FANTOM5_SSTAR
| Name: | surface structure | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Organism subdivision that is the collection of anatomical structures on the body surface[ZFA]." VSAO:0000001, Wikipedia:Surface_structure, ZFA:0000292 | |
| Xrefs: |
| |
| Synonyms: | "anatomical surface feature" EXACT [EHDAA2:0003010] | |
| Alt_id: | UBERON:XAO_0003028-ZFA_0000292 | |
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000061(anatomical structure) |
|---|---|
| part_of: | UBERON:0002416(integumental system) |
Children
| is a: | UBERON:0000931 (proctodeum),UBERON:0000964 (cornea),UBERON:0002199 (integument),UBERON:0004357 (paired limb/fin bud),UBERON:0007376 (outer epithelium),UBERON:0010188 (protuberance),UBERON:0010409 (eye surface),UBERON:3000961 (external integument structure) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10233-103I8 (chicken leg buds, day03 (HH20))
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
... further results Mouse (Mus musculus)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10233-103I8 (chicken leg buds, day03 (HH20))
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003102 (surface structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Organism subdivision that is the collection of anatomical structures on the body surface.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Organism subdivision which is the collection of anatomical structures on the body surface.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Organism subdivision which is the collection of anatomical structures on the body surface.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
