UBERON:0007376
From FANTOM5_SSTAR
| Name: | outer epithelium | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO]. The epidermis of a more complex invertebrate is just one-layer deep, and may be protected by a non-cellular cuticle. The epidermis of a higher vertebrate has many layers, and the outer layers are reinforced with keratin and then die[WP]." [Wikipedia:Epidermis_(zoology)] | |
| Xrefs: |
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| Synonyms: |
"epidermis" NARROW [GO:0008544] "hypodermis" RELATED INCONSISTENT [GO:0008544, WBbt:0005733] "outer epidermal layer" EXACT [] | |
| Comments: | Editor's note: this grouping class exists primarily to align with GO - see GO:0008544. | |
| Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003102(surface structure),UBERON:0010371(ecto-epithelium) |
|---|---|
| develops_from: | UBERON:0007383(enveloping layer of ectoderm) |
Children
| is a: | UBERON:0001003 (skin epidermis) |
|---|---|
| part of: | CL:0000362 (epidermal cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
- 10301-104H4 (Fingernail (including nail plate, eponychium and hyponychium), donor2)
- 10311-104I5
... further results Mouse (Mus musculus)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
- 10301-104H4 (Fingernail (including nail plate, eponychium and hyponychium), donor2)
- 10311-104I5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007376 (outer epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
