FFCP PHASE1:Hg19::chr10:44873515..44873537,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C873|description=CAGE_peak_at_chr10:44873515..44873537,-|id=chr10:44873515..44873537,-|ontology_enrichment_celltype=CL:0000055!5.03e-15!180;CL:0000057!6.73e-13!75;CL:0002620!8.39e-09!23|ontology_enrichment_celltype_v019=CL:0002620;4.59e-20;23!CL:0000135;1.40e-08;3!CL:0000388;1.40e-08;3|ontology_enrichment_celltype_v019_2=CL:0002620,4.26e-20,23;CL:0000057,9.78e-19,76;CL:0000135,1.37e-08,3;CL:0000388,1.37e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;7.35e-12;5!DOID:450;7.35e-12;5!DOID:66;7.35e-12;5!DOID:423;7.35e-12;5!DOID:0080000;7.35e-12;5!DOID:11722;7.35e-12;5|ontology_enrichment_disease_v019_2=DOID:17,3.86e-12,5;DOID:450,3.86e-12,5;DOID:66,3.86e-12,5;DOID:423,3.86e-12,5;DOID:0080000,3.86e-12,5;DOID:11722,3.86e-12,5|ontology_enrichment_uberon=UBERON:0002199!1.86e-07!45;UBERON:0002416!1.86e-07!45|ontology_enrichment_uberon_v019=UBERON:0002199;3.44e-10;46!UBERON:0002416;3.44e-10;46!UBERON:0002097;4.17e-09;41!UBERON:0007846;1.40e-08;3!UBERON:0000043;1.40e-08;3!UBERON:0007845;1.40e-08;3!UBERON:0004905;2.32e-07;8!UBERON:0000982;2.32e-07;8!UBERON:0004770;2.32e-07;8!UBERON:0003102;4.07e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0002199,9.48e-14,46;UBERON:0002416,9.48e-14,46;UBERON:0002097,1.70e-12,41;UBERON:0007846,1.37e-08,3;UBERON:0000043,1.37e-08,3;UBERON:0007845,1.37e-08,3;UBERON:0003102,1.88e-08,99;UBERON:0004905,2.56e-07,8;UBERON:0000982,2.56e-07,8;UBERON:0004770,2.56e-07,8|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,3.3954131665979,0,0,0,0,0.495065411840187,1.32558950291166,1.34465029290355,1.80808358407193,0.730310090387373,0.487932798790507,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.255725123687061,3.61439152384566,0,1.44846518960824,0,0.973269740605272,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,2.15271869829786,0,2.29469296599051,1.06400514659507,0.560677600142307,0,5.67335361359468,0.622422070799533,0.404132016209064,2.12500474047496,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0.206651562351531,2.37600571456411,4.20353779773547,0,0.718618141816238,0,0,0,0.438977620880838,1.83892677479412,2.55404700141215,0.226864366320042,1.97328599257748,1.49490172172997,2.96704661623387,2.40072876867522,3.19462840639161,1.28820270022815,1.11670113798954,1.35021065793013,3.70260619612555,1.26216887122057,2.11714766877288,15.0330832841495,7.10019185033229,5.13835700960965,2.88253006927829,0,0,0,0.609868530647977,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54473944008842,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,2.08014873822732,0,0,0,0.285955987316295,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0.335032530668698,3.18969375826582,0,0,0,1.8403723757871,1.00034104211935,0,1.87173775377726,2.49800584316026,0.630809660135739,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.347534457872331,3.72022199179207,4.80400793335198,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.616838775210622,1.42049380250502,0.246381468041427,0.519254429183621,0.929683027679674,0,0,0,0.34444334449382,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.580024309752732,0,0,0,0.107420244868274,0,0.170453254832202,0.712256285173899,0,0,0,0,0,0,0,0.308033580176089,0,0,0.55597265731176,0.572499546967965,0,0,1.5250415513906,0,0.42793898803392,0,0.78494864019923,0.179872457583315,1.92175920815238,0.706874414074119,0,0,0,0,1.21856744815642,0,0.409499734223957,0.282810863907425,0,0,0.66343897524122,0,0,0,0,1.239293992399,0.281695602532241,0,0,0,0,15.6219650120271,28.9779505804714,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0.552567831062295,0,0,0,1.55519793830904,0,0,0,0.591860433821602,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0.234264445725339,0,0,0,0.789168805698781,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C873 | |||
|description=CAGE_peak_at_chr10:44873515..44873537,- | |||
|id=chr10:44873515..44873537,- | |||
|ontology_enrichment_celltype=CL:0000055!5.03e-15!180;CL:0000057!6.73e-13!75;CL:0002620!8.39e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.59e-20;23!CL:0000135;1.40e-08;3!CL:0000388;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.26e-20,23;CL:0000057,9.78e-19,76;CL:0000135,1.37e-08,3;CL:0000388,1.37e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.35e-12;5!DOID:450;7.35e-12;5!DOID:66;7.35e-12;5!DOID:423;7.35e-12;5!DOID:0080000;7.35e-12;5!DOID:11722;7.35e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.86e-12,5;DOID:450,3.86e-12,5;DOID:66,3.86e-12,5;DOID:423,3.86e-12,5;DOID:0080000,3.86e-12,5;DOID:11722,3.86e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.86e-07!45;UBERON:0002416!1.86e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;3.44e-10;46!UBERON:0002416;3.44e-10;46!UBERON:0002097;4.17e-09;41!UBERON:0007846;1.40e-08;3!UBERON:0000043;1.40e-08;3!UBERON:0007845;1.40e-08;3!UBERON:0004905;2.32e-07;8!UBERON:0000982;2.32e-07;8!UBERON:0004770;2.32e-07;8!UBERON:0003102;4.07e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,9.48e-14,46;UBERON:0002416,9.48e-14,46;UBERON:0002097,1.70e-12,41;UBERON:0007846,1.37e-08,3;UBERON:0000043,1.37e-08,3;UBERON:0007845,1.37e-08,3;UBERON:0003102,1.88e-08,99;UBERON:0004905,2.56e-07,8;UBERON:0000982,2.56e-07,8;UBERON:0004770,2.56e-07,8 | |||
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| |||
|short_description=p@chr10:44873515..44873537,- | |||
}} |
Revision as of 13:27, 10 September 2013
Short description: | p@chr10:44873515..44873537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:44873515..44873537, - |
Coexpression cluster: | C873_Cardiac_Synoviocyte_Fibroblast_tridermal_mesenchymal_tenocyte_liposarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.26e-20 | 23 |
fibroblast | 9.78e-19 | 76 |
fibrocyte | 1.37e-08 | 3 |
tendon cell | 1.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 9.48e-14 | 46 |
integumental system | 9.48e-14 | 46 |
skin of body | 1.70e-12 | 41 |
dense regular connective tissue | 1.37e-08 | 3 |
tendon | 1.37e-08 | 3 |
regular connective tissue | 1.37e-08 | 3 |
surface structure | 1.88e-08 | 99 |
articulation | 2.56e-07 | 8 |
skeletal joint | 2.56e-07 | 8 |
articular system | 2.56e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.86e-12 | 5 |
myotonic disease | 3.86e-12 | 5 |
muscle tissue disease | 3.86e-12 | 5 |
myopathy | 3.86e-12 | 5 |
muscular disease | 3.86e-12 | 5 |
myotonic dystrophy | 3.86e-12 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.