FFCP PHASE1:Hg19::chr10:76863857..76863867,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-20bp_to_AB463584_5end|description=CAGE_peak_1_at_AB463584_5end|id=chr10:76863857..76863867,-|ontology_enrichment_celltype=CL:0002327!1.57e-16!4;CL:0000575!2.72e-15!2;CL:0002231!6.51e-10!3;CL:0002076!5.74e-09!43;CL:0000244!2.89e-08!4;CL:0000731!2.89e-08!4;CL:0002336!4.11e-08!1;CL:0002261!4.11e-08!1;CL:0002170!4.11e-08!1;CL:0002251!7.49e-08!21|ontology_enrichment_celltype_v019=CL:0000244;7.14e-26;4!CL:0000731;7.14e-26;4|ontology_enrichment_celltype_v019_2=CL:0000244,7.14e-26,4;CL:0000731,7.14e-26,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5|ontology_enrichment_uberon=UBERON:0000974!4.83e-32!10;UBERON:0001042!7.40e-24!10;UBERON:0009145!7.40e-24!10;UBERON:0003729!9.35e-22!5;UBERON:0006562!1.19e-21!11;UBERON:0001723!3.83e-21!3;UBERON:0001033!3.83e-21!3;UBERON:0010056!3.83e-21!3;UBERON:0001911!1.57e-16!4;UBERON:0005333!1.57e-16!4;UBERON:0008425!1.57e-16!4;UBERON:0005311!1.57e-16!4;UBERON:0003343!1.01e-15!4;UBERON:0004785!1.01e-15!4;UBERON:0000166!4.26e-15!21;UBERON:0000341!8.41e-15!2;UBERON:0000165!1.92e-14!28;UBERON:0000930!1.92e-14!28;UBERON:0000161!2.70e-14!35;UBERON:0000344!5.44e-14!12;UBERON:0001444!1.31e-12!48;UBERON:0001557!2.40e-12!19;UBERON:0008814!4.48e-11!15;UBERON:0000078!2.38e-09!18;UBERON:0004177!3.44e-09!7;UBERON:0000153!8.85e-09!129;UBERON:0007811!8.85e-09!129;UBERON:0000076!1.62e-08!8;UBERON:0000989!1.75e-08!1;UBERON:0008811!1.75e-08!1;UBERON:0006258!1.75e-08!1;UBERON:0005876!1.75e-08!1;UBERON:0004874!1.75e-08!1;UBERON:0004119!2.50e-08!169;UBERON:0000925!2.50e-08!169;UBERON:0006595!2.50e-08!169;UBERON:0002372!2.50e-08!1;UBERON:0001961!2.50e-08!1;UBERON:0001744!2.50e-08!1;UBERON:0001735!2.50e-08!1;UBERON:0003102!3.70e-08!95;UBERON:0000964!4.42e-08!4;UBERON:0004348!4.42e-08!4;UBERON:0005427!4.42e-08!4;UBERON:0001004!9.32e-08!72;UBERON:0002370!1.74e-07!4;UBERON:0005058!1.74e-07!4;UBERON:0009113!1.74e-07!4;UBERON:0003295!1.74e-07!4;UBERON:0005562!1.74e-07!4;UBERON:0000020!2.13e-07!23;UBERON:0001032!4.43e-07!24;UBERON:0004456!4.43e-07!24;UBERON:0001007!6.41e-07!155;UBERON:0001555!6.41e-07!155;UBERON:0007026!6.41e-07!155;UBERON:0000365!9.07e-07!5|ontology_enrichment_uberon_v019=UBERON:0000365;5.15e-21;5!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0005910;9.07e-18;6!UBERON:0000486;1.33e-09;12!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.15e-21,5;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0005910,9.07e-18,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37020365273626,0.230850775511391,0,0,0.718061155278177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@AB463584}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_AB463584_5end | |||
|description=CAGE_peak_1_at_AB463584_5end | |||
|id=chr10:76863857..76863867,- | |||
|ontology_enrichment_celltype=CL:0002327!1.57e-16!4;CL:0000575!2.72e-15!2;CL:0002231!6.51e-10!3;CL:0002076!5.74e-09!43;CL:0000244!2.89e-08!4;CL:0000731!2.89e-08!4;CL:0002336!4.11e-08!1;CL:0002261!4.11e-08!1;CL:0002170!4.11e-08!1;CL:0002251!7.49e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000244;7.14e-26;4!CL:0000731;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.14e-26,4;CL:0000731,7.14e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000365;5.15e-21;5!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0005910;9.07e-18;6!UBERON:0000486;1.33e-09;12!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.15e-21,5;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0005910,9.07e-18,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37020365273626,0.230850775511391,0,0,0.718061155278177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AB463584 | |||
}} |
Revision as of 14:25, 10 September 2013
Short description: | p1@AB463584 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AB463584_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_AB463584_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.14e-26 | 4 |
urothelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.15e-21 | 5 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
transitional epithelium | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.21e-21 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.