FFCP PHASE1:Hg19::chr11:101981263..101981288,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10413|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16262|TSSclassifier=S|UniProt=P46937,F5GWC5,F5H202|association_with_transcript=53bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end|description=CAGE_peak_6_at_YAP1_5end|id=chr11:101981263..101981288,+|ontology_enrichment_celltype=CL:0000055!1.92e-09!180;CL:0000057!8.22e-08!75;CL:0000066!1.95e-07!254;CL:0000220!4.68e-07!246;CL:0000222!5.13e-07!119;CL:0002321!6.06e-07!248|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-08,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.94e-14!659;UBERON:0000477!3.31e-13!286;UBERON:0000481!6.40e-12!347;UBERON:0003104!2.96e-11!238;UBERON:0009142!2.96e-11!238;UBERON:0004119!1.23e-10!169;UBERON:0000925!1.23e-10!169;UBERON:0006595!1.23e-10!169;UBERON:0001007!1.57e-10!155;UBERON:0001555!1.57e-10!155;UBERON:0007026!1.57e-10!155;UBERON:0000467!4.94e-10!625;UBERON:0000480!8.33e-10!626;UBERON:0004872!9.49e-10!84;UBERON:0000475!1.87e-09!365;UBERON:0001048!4.02e-09!168;UBERON:0002100!1.17e-08!216;UBERON:0000119!1.41e-08!312;UBERON:0004111!1.48e-08!241;UBERON:0000483!3.26e-08!309;UBERON:0003914!4.00e-08!118;UBERON:0000077!5.28e-08!130;UBERON:0000922!6.33e-08!612;UBERON:0003102!6.81e-08!95;UBERON:0004921!1.61e-07!129;UBERON:0004185!1.61e-07!129;UBERON:0001004!1.97e-07!72;UBERON:0002049!3.09e-07!79;UBERON:0007798!3.09e-07!79;UBERON:0000161!3.26e-07!35;UBERON:0000490!3.83e-07!138;UBERON:0002050!4.05e-07!605;UBERON:0005423!4.05e-07!605;UBERON:0001737!6.05e-07!9;UBERON:0001981!6.45e-07!60;UBERON:0007500!6.45e-07!60;UBERON:0004537!6.45e-07!60;UBERON:0006965!6.45e-07!60;UBERON:0000923!6.69e-07!604;UBERON:0005291!6.69e-07!604;UBERON:0006598!6.69e-07!604;UBERON:0002532!6.69e-07!604;UBERON:0000055!8.42e-07!69|ontology_enrichment_uberon_v019=UBERON:0001737;8.92e-08;9!UBERON:0001557;8.92e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.54e-08,145;UBERON:0001555,1.54e-08,145;UBERON:0007026,1.54e-08,145;UBERON:0004872,2.11e-08,83;UBERON:0004119,2.59e-08,160;UBERON:0000925,2.59e-08,160;UBERON:0006595,2.59e-08,160;UBERON:0001737,1.11e-07,9|phase1_expression=2.18014055124668,1.71280419112787,2.11431606143957,4.00293193412522,4.02264984984559,1.74467704820074,0,1.26343974685366,1.30592814099919,0.982935746006035,0.697801167972428,0.436882744260345,0,1.73272894144065,0.331397375727916,1.34465029290355,1.80808358407193,2.92124036154949,1.95173119516203,1.84681587115182,1.83600622119828,0.940364164434263,1.71741592278634,1.91624195102038,1.25542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,1.91793842765295,1.44575660953827,2.00535164254356,2.462390822334,3.1811437882044,4.86634870302636,1.60709189178915,0.886917589850256,1.58102614247627,2.68507104770311,0.364295288292542,2.22470665670658,0,0,0,0,0,0,2.78267370313387,0.860234595106124,1.38856200643038,1.13061588384802,1.25849830862972,3.57653454522088,0.208994966536811,1.29208379584664,0.35576626268671,2.00832367658802,6.0424397566372,0,11.470916704764,2.94130464276695,3.24056779152704,5.80448233846518,4.26605807989723,7.99541511431588,3.06633274931766,0.949265659568129,3.66403487860815,0,0,2.18047026071267,1.98788780678127,2.27934920996244,1.85372853138506,2.29469296599051,1.41867352879343,1.68203280042692,3.20246987189115,1.2333377420858,2.48968828319813,2.02066008104532,5.06731899651722,1.51357427644931,2.30470369792,1.64025002283658,1.87296046098192,0.570471821544449,2.09228152772521,1.29177948508141,1.29498355494505,1.12360645361799,2.24569588380383,2.08818339430006,2.37649296704261,3.56400857184616,2.47266929278557,0,0,0.336672227908132,1.00094815897571,1.38532057742091,0.877955241761676,1.5324389789951,2.25357088359895,1.47461838108027,1.25572744982203,1.2813443329114,0.635795703478686,1.80054657650641,1.75189299705346,1.54584324027377,2.23340227597908,3.20675031258406,2.33848812386877,2.52433774244115,1.01254888506529,2.26304479546337,1.06502877754984,1.10827308050404,1.69560592310488,1.15956511897978,1.09098448236334,2.00763216772303,0.365921118388786,0.927708378250397,1.2781333715647,2.28054321033815,1.00928340350251,0.72995471815166,3.12899064659632,1.92972281457866,0,0.928735856063958,0,3.66751080123516,6.91197229320217,5.06123162755312,5.95587452754927,4.57546832594053,5.69449485866632,6.0674088672074,7.45641567476315,3.07797725557112,1.4763109092493,4.20725321410337,1.2347220339942,1.47008711385542,0,1.96565443335525,2.95394953340702,0,2.09080345523293,0.686271241194102,1.31700342490351,0,1.3068766413512,1.20364978706088,0.325808305310325,0,1.44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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |||
|TSSclassifier=S | |||
|UniProt=P46937,F5GWC5,F5H202 | |||
|association_with_transcript=53bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end | |||
|description=CAGE_peak_6_at_YAP1_5end | |||
|id=chr11:101981263..101981288,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.92e-09!180;CL:0000057!8.22e-08!75;CL:0000066!1.95e-07!254;CL:0000220!4.68e-07!246;CL:0000222!5.13e-07!119;CL:0002321!6.06e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.94e-14!659;UBERON:0000477!3.31e-13!286;UBERON:0000481!6.40e-12!347;UBERON:0003104!2.96e-11!238;UBERON:0009142!2.96e-11!238;UBERON:0004119!1.23e-10!169;UBERON:0000925!1.23e-10!169;UBERON:0006595!1.23e-10!169;UBERON:0001007!1.57e-10!155;UBERON:0001555!1.57e-10!155;UBERON:0007026!1.57e-10!155;UBERON:0000467!4.94e-10!625;UBERON:0000480!8.33e-10!626;UBERON:0004872!9.49e-10!84;UBERON:0000475!1.87e-09!365;UBERON:0001048!4.02e-09!168;UBERON:0002100!1.17e-08!216;UBERON:0000119!1.41e-08!312;UBERON:0004111!1.48e-08!241;UBERON:0000483!3.26e-08!309;UBERON:0003914!4.00e-08!118;UBERON:0000077!5.28e-08!130;UBERON:0000922!6.33e-08!612;UBERON:0003102!6.81e-08!95;UBERON:0004921!1.61e-07!129;UBERON:0004185!1.61e-07!129;UBERON:0001004!1.97e-07!72;UBERON:0002049!3.09e-07!79;UBERON:0007798!3.09e-07!79;UBERON:0000161!3.26e-07!35;UBERON:0000490!3.83e-07!138;UBERON:0002050!4.05e-07!605;UBERON:0005423!4.05e-07!605;UBERON:0001737!6.05e-07!9;UBERON:0001981!6.45e-07!60;UBERON:0007500!6.45e-07!60;UBERON:0004537!6.45e-07!60;UBERON:0006965!6.45e-07!60;UBERON:0000923!6.69e-07!604;UBERON:0005291!6.69e-07!604;UBERON:0006598!6.69e-07!604;UBERON:0002532!6.69e-07!604;UBERON:0000055!8.42e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.92e-08;9!UBERON:0001557;8.92e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.54e-08,145;UBERON:0001555,1.54e-08,145;UBERON:0007026,1.54e-08,145;UBERON:0004872,2.11e-08,83;UBERON:0004119,2.59e-08,160;UBERON:0000925,2.59e-08,160;UBERON:0006595,2.59e-08,160;UBERON:0001737,1.11e-07,9 | |||
|phase1_expression=2.18014055124668,1.71280419112787,2.11431606143957,4.00293193412522,4.02264984984559,1.74467704820074,0,1.26343974685366,1.30592814099919,0.982935746006035,0.697801167972428,0.436882744260345,0,1.73272894144065,0.331397375727916,1.34465029290355,1.80808358407193,2.92124036154949,1.95173119516203,1.84681587115182,1.83600622119828,0.940364164434263,1.71741592278634,1.91624195102038,1.25542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,1.91793842765295,1.44575660953827,2.00535164254356,2.462390822334,3.1811437882044,4.86634870302636,1.60709189178915,0.886917589850256,1.58102614247627,2.68507104770311,0.364295288292542,2.22470665670658,0,0,0,0,0,0,2.78267370313387,0.860234595106124,1.38856200643038,1.13061588384802,1.25849830862972,3.57653454522088,0.208994966536811,1.29208379584664,0.35576626268671,2.00832367658802,6.0424397566372,0,11.470916704764,2.94130464276695,3.24056779152704,5.80448233846518,4.26605807989723,7.99541511431588,3.06633274931766,0.949265659568129,3.66403487860815,0,0,2.18047026071267,1.98788780678127,2.27934920996244,1.85372853138506,2.29469296599051,1.41867352879343,1.68203280042692,3.20246987189115,1.2333377420858,2.48968828319813,2.02066008104532,5.06731899651722,1.51357427644931,2.30470369792,1.64025002283658,1.87296046098192,0.570471821544449,2.09228152772521,1.29177948508141,1.29498355494505,1.12360645361799,2.24569588380383,2.08818339430006,2.37649296704261,3.56400857184616,2.47266929278557,0,0,0.336672227908132,1.00094815897571,1.38532057742091,0.877955241761676,1.5324389789951,2.25357088359895,1.47461838108027,1.25572744982203,1.2813443329114,0.635795703478686,1.80054657650641,1.75189299705346,1.54584324027377,2.23340227597908,3.20675031258406,2.33848812386877,2.52433774244115,1.01254888506529,2.26304479546337,1.06502877754984,1.10827308050404,1.69560592310488,1.15956511897978,1.09098448236334,2.00763216772303,0.365921118388786,0.927708378250397,1.2781333715647,2.28054321033815,1.00928340350251,0.72995471815166,3.12899064659632,1.92972281457866,0,0.928735856063958,0,3.66751080123516,6.91197229320217,5.06123162755312,5.95587452754927,4.57546832594053,5.69449485866632,6.0674088672074,7.45641567476315,3.07797725557112,1.4763109092493,4.20725321410337,1.2347220339942,1.47008711385542,0,1.96565443335525,2.95394953340702,0,2.09080345523293,0.686271241194102,1.31700342490351,0,1.3068766413512,1.20364978706088,0.325808305310325,0,1.44331342025273,0.927443239800615,1.52631302506568,4.33099343283221,4.1668696131895,8.75169100279152,0,2.57545848628462,0,0,0,0,0.839910640994298,0.992425680696705,3.22410681730254,3.77824120068151,1.15014803749563,0,0,0.207328115540772,0,0,1.07946420296687,2.29193055334967,0,1.71072446022705,2.67351481028641,2.40274446275134,2.00078502841405,1.90622843387113,1.30788020649984,1.98013371716565,0.904902010304444,7.15312891703765,1.690605505112,1.86156681609409,1.04007436911366,1.02882949704857,1.41849132023278,1.8649552531127,1.14382394926518,1.08524321078289,0,2.60588947434988,0.710783897485092,0.791951872933429,1.80863626235752,0.871533458600294,1.49959486773086,0,0,0,1.19812427745791,1.14861935834114,4.27910715122155,1.30303176000821,1.2328579353023,0.716243852959582,0,0,0,0,1.27047312111232,0,0.773288812777695,0.167516265334349,0,0,0,0,2.94459580125936,1.50051156317903,0.813795071099207,0.415941723061614,1.96271887676878,0.788512075169673,1.99140405487612,0.300946099727719,0,1.03473071292505,1.32845119707087,1.47495334833363,1.56390506042549,0.587403472388222,1.02943027143257,0,0,0,0.303127571446259,0,1.20956117331872,1.24053903909388,2.14846762603287,1.96462066103151,3.33161788064823,1.02341449813341,3.21707842287215,1.48418066444991,3.23840356985577,2.30830242907065,2.29956036838666,2.59627214591811,1.85936605535935,4.10922128611516,1.80455823272956,1.65745780084613,0.574072240823034,1.27463817604702,1.57349297951309,1.35359883872224,0.462092022626489,3.13739907670742,0,0.633309773357254,0,0.510281115829547,2.37507507712353,3.08454505380579,1.35473218771926,0,0.254876273045038,0,1.11937377361089,0,0,0.769350375349168,0.656029291399411,0.976135183992909,1.95777922130672,0.366277859273374,0.41254749960294,1.14853107599234,0,3.21367859688319,1.83674364755032,1.23238893691716,2.30255512089194,1.10269257987624,1.18162269355101,0.870100163485371,1.87498580315422,1.15741646340759,0.661139661443912,1.53752053892085,2.67986696238627,1.71968227454435,0.929691098594572,0.62962469366128,0.6970372701606,1.23213432070436,1.06461206063404,0,0.74129687641568,0.858749320451947,0,1.2655176988749,0.762520775695299,1.02359116524534,0,0.636406495851874,1.56989728039846,0.359744915166629,0.274537029736055,0.942499218765491,1.2130948894399,1.58510321173008,2.10629228119491,0,1.21856744815642,1.05650146756755,0.682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| |||
|short_description=p6@YAP1 | |||
}} |
Revision as of 15:19, 10 September 2013
Short description: | p6@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_YAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000345877, ENST00000445250, ENST00000537274, uc001pgs.2, uc001pgt.2, uc001pgu.2, uc001pgv.2_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | P46937F5GWC5F5H202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.54e-08 | 145 |
digestive tract | 1.54e-08 | 145 |
primitive gut | 1.54e-08 | 145 |
splanchnic layer of lateral plate mesoderm | 2.11e-08 | 83 |
endoderm-derived structure | 2.59e-08 | 160 |
endoderm | 2.59e-08 | 160 |
presumptive endoderm | 2.59e-08 | 160 |
larynx | 1.11e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.