FFCP PHASE1:Hg19::chr11:111724532..111724542,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C231|description=CAGE_peak_at_chr11:111724532..111724542,-|id=chr11:111724532..111724542,-|ontology_enrichment_celltype=CL:0000077!1.42e-08!19|ontology_enrichment_celltype_v019=CL:0000077;2.08e-09;19|ontology_enrichment_celltype_v019_2=CL:0000077,2.08e-09,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009663!5.47e-38!7;UBERON:0000369!6.73e-38!4;UBERON:0002435!6.73e-38!4;UBERON:0000204!6.73e-38!4;UBERON:0010082!6.73e-38!4;UBERON:0002308!1.15e-29!9;UBERON:0002420!1.15e-29!9;UBERON:0000125!1.15e-29!9;UBERON:0007245!1.15e-29!9;UBERON:0010009!1.15e-29!9;UBERON:0010011!1.15e-29!9;UBERON:0000454!1.15e-29!9;UBERON:0005383!4.12e-23!3;UBERON:0005382!4.12e-23!3;UBERON:0001874!4.44e-18!1;UBERON:0001882!5.26e-18!1;UBERON:0005403!5.26e-18!1;UBERON:0002038!1.22e-17!1;UBERON:0009661!1.22e-17!1;UBERON:0002780!6.06e-14!41;UBERON:0001890!6.06e-14!41;UBERON:0006240!6.06e-14!41;UBERON:0003080!1.29e-13!42;UBERON:0001894!2.70e-10!7;UBERON:0006222!2.70e-10!7;UBERON:0001049!4.78e-10!57;UBERON:0005068!4.78e-10!57;UBERON:0006241!4.78e-10!57;UBERON:0007135!4.78e-10!57;UBERON:0002616!1.05e-09!59;UBERON:0001873!1.33e-09!2;UBERON:0010122!1.33e-09!2;UBERON:0002950!1.71e-09!2;UBERON:0001891!1.71e-09!2;UBERON:0009616!1.71e-09!2;UBERON:0001897!2.02e-09!2;UBERON:0003056!2.20e-09!61;UBERON:0000955!3.64e-08!69;UBERON:0006238!3.64e-08!69;UBERON:0002791!4.13e-08!33;UBERON:0002020!6.93e-08!34;UBERON:0003528!6.93e-08!34;UBERON:0001893!6.93e-08!34;UBERON:0001017!7.34e-07!82;UBERON:0006331!9.64e-07!3|ontology_enrichment_uberon_v019=UBERON:0001882;2.70e-40;1!UBERON:0001874;2.70e-40;1!UBERON:0005403;2.70e-40;1!UBERON:0000369;4.94e-40;4!UBERON:0002435;4.94e-40;4!UBERON:0000204;4.94e-40;4!UBERON:0009663;2.02e-23;7!UBERON:0002420;1.76e-18;9!UBERON:0000125;1.76e-18;9!UBERON:0007245;1.76e-18;9!UBERON:0002308;1.76e-18;9!UBERON:0010009;1.76e-18;9!UBERON:0010011;1.76e-18;9!UBERON:0000454;1.76e-18;9!UBERON:0005383;1.96e-14;3!UBERON:0005382;1.96e-14;3!UBERON:0000349;3.35e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.21e-40,1;UBERON:0001882,3.30e-40,1;UBERON:0005403,3.30e-40,1;UBERON:0000369,4.94e-40,4;UBERON:0002435,4.94e-40,4;UBERON:0000204,4.94e-40,4;UBERON:0010082,4.94e-40,4;UBERON:0009663,2.02e-23,7;UBERON:0002420,1.76e-18,9;UBERON:0000125,1.76e-18,9;UBERON:0007245,1.76e-18,9;UBERON:0002308,1.76e-18,9;UBERON:0010009,1.76e-18,9;UBERON:0010011,1.76e-18,9;UBERON:0000454,1.76e-18,9;UBERON:0005383,1.83e-14,3;UBERON:0005382,1.83e-14,3;UBERON:0000349,3.49e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42590878707255,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.80805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:111724532..111724542,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr11:111724532..111724542,- | |||
|id=chr11:111724532..111724542,- | |||
|ontology_enrichment_celltype=CL:0000077!1.42e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.08e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.08e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009663!5.47e-38!7;UBERON:0000369!6.73e-38!4;UBERON:0002435!6.73e-38!4;UBERON:0000204!6.73e-38!4;UBERON:0010082!6.73e-38!4;UBERON:0002308!1.15e-29!9;UBERON:0002420!1.15e-29!9;UBERON:0000125!1.15e-29!9;UBERON:0007245!1.15e-29!9;UBERON:0010009!1.15e-29!9;UBERON:0010011!1.15e-29!9;UBERON:0000454!1.15e-29!9;UBERON:0005383!4.12e-23!3;UBERON:0005382!4.12e-23!3;UBERON:0001874!4.44e-18!1;UBERON:0001882!5.26e-18!1;UBERON:0005403!5.26e-18!1;UBERON:0002038!1.22e-17!1;UBERON:0009661!1.22e-17!1;UBERON:0002780!6.06e-14!41;UBERON:0001890!6.06e-14!41;UBERON:0006240!6.06e-14!41;UBERON:0003080!1.29e-13!42;UBERON:0001894!2.70e-10!7;UBERON:0006222!2.70e-10!7;UBERON:0001049!4.78e-10!57;UBERON:0005068!4.78e-10!57;UBERON:0006241!4.78e-10!57;UBERON:0007135!4.78e-10!57;UBERON:0002616!1.05e-09!59;UBERON:0001873!1.33e-09!2;UBERON:0010122!1.33e-09!2;UBERON:0002950!1.71e-09!2;UBERON:0001891!1.71e-09!2;UBERON:0009616!1.71e-09!2;UBERON:0001897!2.02e-09!2;UBERON:0003056!2.20e-09!61;UBERON:0000955!3.64e-08!69;UBERON:0006238!3.64e-08!69;UBERON:0002791!4.13e-08!33;UBERON:0002020!6.93e-08!34;UBERON:0003528!6.93e-08!34;UBERON:0001893!6.93e-08!34;UBERON:0001017!7.34e-07!82;UBERON:0006331!9.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;2.70e-40;1!UBERON:0001874;2.70e-40;1!UBERON:0005403;2.70e-40;1!UBERON:0000369;4.94e-40;4!UBERON:0002435;4.94e-40;4!UBERON:0000204;4.94e-40;4!UBERON:0009663;2.02e-23;7!UBERON:0002420;1.76e-18;9!UBERON:0000125;1.76e-18;9!UBERON:0007245;1.76e-18;9!UBERON:0002308;1.76e-18;9!UBERON:0010009;1.76e-18;9!UBERON:0010011;1.76e-18;9!UBERON:0000454;1.76e-18;9!UBERON:0005383;1.96e-14;3!UBERON:0005382;1.96e-14;3!UBERON:0000349;3.35e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.21e-40,1;UBERON:0001882,3.30e-40,1;UBERON:0005403,3.30e-40,1;UBERON:0000369,4.94e-40,4;UBERON:0002435,4.94e-40,4;UBERON:0000204,4.94e-40,4;UBERON:0010082,4.94e-40,4;UBERON:0009663,2.02e-23,7;UBERON:0002420,1.76e-18,9;UBERON:0000125,1.76e-18,9;UBERON:0007245,1.76e-18,9;UBERON:0002308,1.76e-18,9;UBERON:0010009,1.76e-18,9;UBERON:0010011,1.76e-18,9;UBERON:0000454,1.76e-18,9;UBERON:0005383,1.83e-14,3;UBERON:0005382,1.83e-14,3;UBERON:0000349,3.49e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42590878707255,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.80805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:111724532..111724542,- | |||
}} |
Revision as of 15:41, 10 September 2013
Short description: | p@chr11:111724532..111724542, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:111724532..111724542, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.08e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
putamen | 2.21e-40 | 1 |
nucleus accumbens | 3.30e-40 | 1 |
ventral striatum | 3.30e-40 | 1 |
corpus striatum | 4.94e-40 | 4 |
striatum | 4.94e-40 | 4 |
ventral part of telencephalon | 4.94e-40 | 4 |
future corpus striatum | 4.94e-40 | 4 |
telencephalic nucleus | 2.02e-23 | 7 |
basal ganglion | 1.76e-18 | 9 |
neural nucleus | 1.76e-18 | 9 |
nuclear complex of neuraxis | 1.76e-18 | 9 |
nucleus of brain | 1.76e-18 | 9 |
aggregate regional part of brain | 1.76e-18 | 9 |
collection of basal ganglia | 1.76e-18 | 9 |
cerebral subcortex | 1.76e-18 | 9 |
caudate-putamen | 1.83e-14 | 3 |
dorsal striatum | 1.83e-14 | 3 |
limbic system | 3.49e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.