FFCP PHASE1:Hg19::chr11:65265103..65265116,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=378938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=29665|TSSclassifier=S|UniProt=|association_with_transcript=-116bp_to_ENST00000534336,NR_002819,uc010roh.1_5end|description=CAGE_peak_7_at_MALAT1_5end|id=chr11:65265103..65265116,+|ontology_enrichment_celltype=CL:0000860!1.71e-10!45;CL:0002057!4.92e-10!42;CL:0000839!2.88e-07!70|ontology_enrichment_celltype_v019=CL:0000860;4.09e-32;33!CL:0002057;4.09e-32;33!CL:0000473;5.49e-22;39!CL:0000234;5.49e-22;39!CL:0000576;1.87e-13;48!CL:0000766;1.08e-08;69|ontology_enrichment_celltype_v019_2=CL:0000860,7.16e-26,42;CL:0002057,7.16e-26,42;CL:0000473,8.56e-22,48;CL:0000234,8.56e-22,48;CL:0000557,4.32e-18,67;CL:0002009,4.62e-17,61;CL:0000839,8.66e-17,66;CL:0000766,2.44e-16,72;CL:0002194,4.02e-16,59;CL:0000576,4.02e-16,59;CL:0000040,4.02e-16,59;CL:0000559,4.02e-16,59;CL:0002031,3.10e-14,120;CL:0000763,8.90e-14,108;CL:0000049,8.90e-14,108;CL:0002032,1.21e-12,161;CL:0000837,1.21e-12,161;CL:0000738,1.59e-12,136;CL:0002087,6.84e-12,115;CL:0000037,1.05e-11,168;CL:0000988,1.29e-10,177|ontology_enrichment_development_v019=CL:0002057;1.38e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.01e-15,76;UBERON:0001474,1.08e-14,82;UBERON:0004765,5.64e-14,90;UBERON:0001434,7.54e-12,100;UBERON:0002405,4.04e-11,93;UBERON:0002390,3.23e-10,98;UBERON:0003061,3.23e-10,98;UBERON:0002193,1.12e-08,108|phase1_expression=0.908391896352783,0,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0.572471974262113,0,0.125542639594803,1.37544130346312,1.06730766284929,1.02324015707783,0,0,0.154816123316076,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,2.55671940596253,2.46700732813095,8.6717783850629,1.1507695692886,3.33008918487831,3.78371567821736,8.27389633767885,9.68227025375739,13.5426486594342,0.564727018627814,0,1.12361742222542,3.67300670845083,4.8139354061414,2.55734850319616,0,0,1.27867425159808,1.45104619314292,1.13477044938228,1.24564449799115,3.26623264833766,1.5644487552606,3.9093992046921,1.81619850790011,4.05105399586321,1.26584954976354,0,0,0.209658645508376,0,0.150176892841506,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,3.1434978119451,0,0,0,0.348259474598534,0,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0.496971951695318,0.12663051166458,1.58891016975863,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0.936480230490962,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.772921620136887,0,0.506328996723799,0.0974370051611986,0.504867548488229,0,0.484938170456436,0.355009592516614,0.201504196455281,0.339121184620975,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,1.56449532329816,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0.269662616320329,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0.98775256867763,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,2.37061319387782,0,0,0.234004265139238,0,1.87467667973554,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,2.28060927094849,0.864719720501769,1.76739406796932,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.61384789315225,0,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0.246381468041427,0,0,0.241718899183244,0.200506470303285,2.76242966807689,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0.784306353074702,0,0,0,1.23649213977267,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.1074202448682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57028,0,0.413731983447581,1.0661699095049,0.952257725854961,0.0645889098360061,0.682821857254437,0,0.509177266225319,1.0105859447911,0.870866991587845,0.342233301085281,0.336760265072938,0.645499848534087,0,0.244209805832924,0.320182037633146,0,0.179650404213174,0,0.122241444182866,0.406896178315738,3.32878387092756,0.603821380773079,2.24397944612263|short_description=p7@MALAT1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=378938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29665 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-116bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | |||
|description=CAGE_peak_7_at_MALAT1_5end | |||
|id=chr11:65265103..65265116,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.71e-10!45;CL:0002057!4.92e-10!42;CL:0000839!2.88e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.09e-32;33!CL:0002057;4.09e-32;33!CL:0000473;5.49e-22;39!CL:0000234;5.49e-22;39!CL:0000576;1.87e-13;48!CL:0000766;1.08e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.16e-26,42;CL:0002057,7.16e-26,42;CL:0000473,8.56e-22,48;CL:0000234,8.56e-22,48;CL:0000557,4.32e-18,67;CL:0002009,4.62e-17,61;CL:0000839,8.66e-17,66;CL:0000766,2.44e-16,72;CL:0002194,4.02e-16,59;CL:0000576,4.02e-16,59;CL:0000040,4.02e-16,59;CL:0000559,4.02e-16,59;CL:0002031,3.10e-14,120;CL:0000763,8.90e-14,108;CL:0000049,8.90e-14,108;CL:0002032,1.21e-12,161;CL:0000837,1.21e-12,161;CL:0000738,1.59e-12,136;CL:0002087,6.84e-12,115;CL:0000037,1.05e-11,168;CL:0000988,1.29e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.01e-15,76;UBERON:0001474,1.08e-14,82;UBERON:0004765,5.64e-14,90;UBERON:0001434,7.54e-12,100;UBERON:0002405,4.04e-11,93;UBERON:0002390,3.23e-10,98;UBERON:0003061,3.23e-10,98;UBERON:0002193,1.12e-08,108 | |||
|phase1_expression=0.908391896352783,0,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0.572471974262113,0,0.125542639594803,1.37544130346312,1.06730766284929,1.02324015707783,0,0,0.154816123316076,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,2.55671940596253,2.46700732813095,8.6717783850629,1.1507695692886,3.33008918487831,3.78371567821736,8.27389633767885,9.68227025375739,13.5426486594342,0.564727018627814,0,1.12361742222542,3.67300670845083,4.8139354061414,2.55734850319616,0,0,1.27867425159808,1.45104619314292,1.13477044938228,1.24564449799115,3.26623264833766,1.5644487552606,3.9093992046921,1.81619850790011,4.05105399586321,1.26584954976354,0,0,0.209658645508376,0,0.150176892841506,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,3.1434978119451,0,0,0,0.348259474598534,0,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0.496971951695318,0.12663051166458,1.58891016975863,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0.936480230490962,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.772921620136887,0,0.506328996723799,0.0974370051611986,0.504867548488229,0,0.484938170456436,0.355009592516614,0.201504196455281,0.339121184620975,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,1.56449532329816,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0.269662616320329,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0.98775256867763,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,2.37061319387782,0,0,0.234004265139238,0,1.87467667973554,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,2.28060927094849,0.864719720501769,1.76739406796932,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.61384789315225,0,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0.246381468041427,0,0,0.241718899183244,0.200506470303285,2.76242966807689,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0.784306353074702,0,0,0,1.23649213977267,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.495854746082934,0.192190067365106,4.72167036229961,0.708104465988849,0,0.62962469366128,1.3940745403212,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,1.08890984861323,0.376575203107117,0.43050537267123,0,0,0.918893600827838,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0.191505370132367,0.635020748171649,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0,1.67043704337145,0,0.540911356951966,0.33307196799782,0,0.561421621224659,0.146508179271894,1.21360521749513,1.22587722705226,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0.984685914873589,0.556543525114529,0,0.63337622438398,0.398495976502139,0.276283915531148,0,0,1.96935688737711,0.311039587661807,0.0898683511473268,0.358042349351218,0.511572370226872,0.493217028184668,0,0,0,0.0927680981618513,0,1.82299432759663,5.33505999976794,1.44999915086959,0,0.508507300585533,0.236387681767936,1.03423011972439,0.291604613383254,0.347249989866585,0,0.482385754501632,0,0.552896299656123,0,0,0.10893846351899,0.697118721393016,0.0769502585037971,0,0.23056390438806,1.43612231055635,0.108647371922008,0.638002319463839,0.366390373607449,0,0,0,0,1.80476528493745,1.9606253431774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| |||
|short_description=p7@MALAT1 | |||
}} |
Revision as of 18:57, 10 September 2013
Short description: | p7@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MALAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -116bp_to_ENST00000534336, NR_002819, uc010roh.1_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.16e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.16e-26 | 42 |
defensive cell | 8.56e-22 | 48 |
phagocyte | 8.56e-22 | 48 |
granulocyte monocyte progenitor cell | 4.32e-18 | 67 |
macrophage dendritic cell progenitor | 4.62e-17 | 61 |
myeloid lineage restricted progenitor cell | 8.66e-17 | 66 |
myeloid leukocyte | 2.44e-16 | 72 |
monopoietic cell | 4.02e-16 | 59 |
monocyte | 4.02e-16 | 59 |
monoblast | 4.02e-16 | 59 |
promonocyte | 4.02e-16 | 59 |
hematopoietic lineage restricted progenitor cell | 3.10e-14 | 120 |
myeloid cell | 8.90e-14 | 108 |
common myeloid progenitor | 8.90e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.21e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-12 | 161 |
leukocyte | 1.59e-12 | 136 |
nongranular leukocyte | 6.84e-12 | 115 |
hematopoietic stem cell | 1.05e-11 | 168 |
hematopoietic cell | 1.29e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.01e-15 | 76 |
bone element | 1.08e-14 | 82 |
skeletal element | 5.64e-14 | 90 |
skeletal system | 7.54e-12 | 100 |
immune system | 4.04e-11 | 93 |
hematopoietic system | 3.23e-10 | 98 |
blood island | 3.23e-10 | 98 |
hemolymphoid system | 1.12e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.