FFCP PHASE1:Hg19::chr11:67253567..67253602,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C36|description=CAGE_peak_at_chr11:67253567..67253602,+|id=chr11:67253567..67253602,+|ontology_enrichment_celltype=CL:0000542!6.89e-28!53;CL:0000051!6.89e-28!53;CL:0000838!1.23e-25!52;CL:0000945!2.69e-18!24;CL:0000826!2.69e-18!24;CL:0002031!5.42e-11!124;CL:0002087!1.60e-10!119;CL:0000738!3.44e-10!140;CL:0000988!5.82e-10!182;CL:0002032!1.04e-08!165;CL:0000837!1.04e-08!165;CL:0000037!3.99e-08!172;CL:0000566!3.99e-08!172;CL:0000084!9.39e-07!25;CL:0000827!9.39e-07!25|ontology_enrichment_celltype_v019=CL:0000946;5.97e-34;1!CL:0000786;5.97e-34;1!CL:0000945;1.72e-22;24!CL:0000542;1.42e-07;53|ontology_enrichment_celltype_v019_2=CL:0000946,3.61e-34,1;CL:0000786,3.61e-34,1;CL:0000980,3.61e-34,1;CL:0000945,1.63e-22,24;CL:0000826,1.63e-22,24;CL:0000785,7.67e-18,2;CL:0000955,7.67e-18,2;CL:0000818,7.67e-18,2;CL:0000954,7.67e-18,2;CL:0000816,7.67e-18,2;CL:0000838,2.69e-16,52;CL:0000542,5.33e-16,53;CL:0000051,5.33e-16,53;CL:0000817,2.31e-12,3;CL:0002087,1.53e-07,115;CL:0002031,3.03e-07,120|ontology_enrichment_development_v019=CL:0000954;9.86e-18;2!CL:0000051;1.42e-07;53|ontology_enrichment_disease=DOID:0060058!6.11e-19!10;DOID:2531!3.05e-07!51;DOID:0060083!3.05e-07!51|ontology_enrichment_disease_v019=DOID:0060058;3.04e-14;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.25e-14,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002106;1.96e-12;3!UBERON:0004177;5.54e-08;5!UBERON:0005057;5.54e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,2.38091709404843,1.73163718890094,0,0,0,0,0,0,0.387336002901508,0.995184627411951,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0.946895611469467,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,1.48323486804084,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95897778844825,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,2.19870543034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466|short_description=p@chr11:67253567..67253602,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr11:67253567..67253602,+ | |||
|id=chr11:67253567..67253602,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.89e-28!53;CL:0000051!6.89e-28!53;CL:0000838!1.23e-25!52;CL:0000945!2.69e-18!24;CL:0000826!2.69e-18!24;CL:0002031!5.42e-11!124;CL:0002087!1.60e-10!119;CL:0000738!3.44e-10!140;CL:0000988!5.82e-10!182;CL:0002032!1.04e-08!165;CL:0000837!1.04e-08!165;CL:0000037!3.99e-08!172;CL:0000566!3.99e-08!172;CL:0000084!9.39e-07!25;CL:0000827!9.39e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000946;5.97e-34;1!CL:0000786;5.97e-34;1!CL:0000945;1.72e-22;24!CL:0000542;1.42e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.61e-34,1;CL:0000786,3.61e-34,1;CL:0000980,3.61e-34,1;CL:0000945,1.63e-22,24;CL:0000826,1.63e-22,24;CL:0000785,7.67e-18,2;CL:0000955,7.67e-18,2;CL:0000818,7.67e-18,2;CL:0000954,7.67e-18,2;CL:0000816,7.67e-18,2;CL:0000838,2.69e-16,52;CL:0000542,5.33e-16,53;CL:0000051,5.33e-16,53;CL:0000817,2.31e-12,3;CL:0002087,1.53e-07,115;CL:0002031,3.03e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;9.86e-18;2!CL:0000051;1.42e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.11e-19!10;DOID:2531!3.05e-07!51;DOID:0060083!3.05e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.04e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.25e-14,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.96e-12;3!UBERON:0004177;5.54e-08;5!UBERON:0005057;5.54e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,2.38091709404843,1.73163718890094,0,0,0,0,0,0,0.387336002901508,0.995184627411951,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0.946895611469467,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,1.48323486804084,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95897778844825,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,2.19870543034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr11:67253567..67253602,+ | |||
}} |
Revision as of 19:17, 10 September 2013
Short description: | p@chr11:67253567..67253602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:67253567..67253602, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.61e-34 | 1 |
plasma cell | 3.61e-34 | 1 |
plasmablast | 3.61e-34 | 1 |
lymphocyte of B lineage | 1.63e-22 | 24 |
pro-B cell | 1.63e-22 | 24 |
mature B cell | 7.67e-18 | 2 |
pre-B-II cell | 7.67e-18 | 2 |
transitional stage B cell | 7.67e-18 | 2 |
small pre-B-II cell | 7.67e-18 | 2 |
immature B cell | 7.67e-18 | 2 |
lymphoid lineage restricted progenitor cell | 2.69e-16 | 52 |
lymphocyte | 5.33e-16 | 53 |
common lymphoid progenitor | 5.33e-16 | 53 |
precursor B cell | 2.31e-12 | 3 |
nongranular leukocyte | 1.53e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.03e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.25e-14 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.