FFCP PHASE1:Hg19::chr11:74442461..74442481,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25884|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24168|TSSclassifier=S|UniProt=Q6WN34|association_with_transcript=-31bp_to_ENST00000376332_5end|coexpression_cluster_id=C2164|description=CAGE_peak_1_at_CHRDL2_5end|id=chr11:74442461..74442481,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002622;8.45e-08;3!CL:0000499;8.93e-07;28|ontology_enrichment_celltype_v019_2=CL:0002622,1.00e-07,3;CL:0000499,9.50e-07,28|ontology_enrichment_development_v019=UBERON:0006603;1.61e-09;65!UBERON:0003104;1.54e-08;31!UBERON:0005062;7.43e-07;4!UBERON:0007284;7.43e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.79e-29!115;UBERON:0003101!1.49e-09!22;UBERON:0000079!1.49e-09!22;UBERON:0000481!2.00e-07!347;UBERON:0001046!3.42e-07!19;UBERON:0004122!9.23e-07!15|ontology_enrichment_uberon_v019=UBERON:0003101;2.34e-13;22!UBERON:0000079;2.34e-13;22!UBERON:0003135;5.07e-10;11!UBERON:0005904;8.28e-10;4!UBERON:0004151;3.30e-09;3!UBERON:0003978;4.71e-09;3!UBERON:0000946;4.71e-09;3!UBERON:0006947;9.08e-08;3!UBERON:0004054;9.08e-08;3!UBERON:0007023;4.99e-07;114!UBERON:0007100;5.80e-07;25!UBERON:0001155;8.07e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.68e-29,114;UBERON:0003101,2.74e-13,22;UBERON:0000079,2.74e-13,22;UBERON:0003135,5.49e-10,11;UBERON:0005904,8.90e-10,4;UBERON:0004122,3.19e-09,15;UBERON:0004151,3.26e-09,3;UBERON:0003978,4.71e-09,3;UBERON:0009751,4.71e-09,3;UBERON:0000946,4.71e-09,3;UBERON:0002523,4.71e-09,3;UBERON:0005983,4.71e-09,3;UBERON:0002165,4.71e-09,3;UBERON:0002062,4.71e-09,3;UBERON:0007280,4.71e-09,3;UBERON:0001046,7.40e-09,19;UBERON:0003064,2.13e-08,28;UBERON:0005156,7.95e-08,59;UBERON:0000990,7.95e-08,59;UBERON:0004921,8.08e-08,118;UBERON:0006947,9.53e-08,3;UBERON:0004054,9.53e-08,3;UBERON:0000162,1.01e-07,14;UBERON:0001353,1.01e-07,14;UBERON:0000163,1.01e-07,14;UBERON:0006866,1.01e-07,14;UBERON:0000164,1.01e-07,14;UBERON:0000931,1.01e-07,14;UBERON:0001155,7.38e-07,9|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,8.02140657017423,1.15877215168659,0,69.1021515829743,0,0,0,25.4099406465563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,22.7901074264406,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0.831883446123229,0,0,0.937131319941706,3.00946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0.604297247958111,0,0,2.06666006696292,5.09855270418808,4.327105693661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,3.21367859688319,0.290012154876366,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,1.95053495635836,0,0,0.272999822815972,4.24216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,9.28873595309722,0.658589785919804,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0.63337622438398,1.39473591775749,15.1956153542131,0,0,0,0,0,0,0,39.6546490660473,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0,0,0.438770794307945,0,0,172.214678531498,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,5.97157158647103,34.3215350272956,11.6095727537389,0,0,0,0.067401132980677,13.6438200040794,0,0,0.19566461893209,0,1.57833761139756,3.62972148145992,0,137.683557010475,0,0,0,0,0.313932918407225,0,0,0,0,0,0,129.472461167344,0,0,0,0,7.95309935205039,0,1.35588444468319,0,0,0.189932387867636,0.195551382734803,0,290.722978834998,0,0,0.114536596165916,0,0,0,9.66345541928861,0,0,0,0,0,0,0,0,0,49.7122674264613,16.7287109528529,72.5051754822582,4.99197501247478,14.5936856366434,37.9391477651183,0.604651252380536,10.8089965062721,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0.182248669974074,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24168 | |||
|TSSclassifier=S | |||
|UniProt=Q6WN34 | |||
|association_with_transcript=-31bp_to_ENST00000376332_5end | |||
|coexpression_cluster_id=C2164 | |||
|description=CAGE_peak_1_at_CHRDL2_5end | |||
|id=chr11:74442461..74442481,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;8.45e-08;3!CL:0000499;8.93e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.00e-07,3;CL:0000499,9.50e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.61e-09;65!UBERON:0003104;1.54e-08;31!UBERON:0005062;7.43e-07;4!UBERON:0007284;7.43e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-29!115;UBERON:0003101!1.49e-09!22;UBERON:0000079!1.49e-09!22;UBERON:0000481!2.00e-07!347;UBERON:0001046!3.42e-07!19;UBERON:0004122!9.23e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.34e-13;22!UBERON:0000079;2.34e-13;22!UBERON:0003135;5.07e-10;11!UBERON:0005904;8.28e-10;4!UBERON:0004151;3.30e-09;3!UBERON:0003978;4.71e-09;3!UBERON:0000946;4.71e-09;3!UBERON:0006947;9.08e-08;3!UBERON:0004054;9.08e-08;3!UBERON:0007023;4.99e-07;114!UBERON:0007100;5.80e-07;25!UBERON:0001155;8.07e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.68e-29,114;UBERON:0003101,2.74e-13,22;UBERON:0000079,2.74e-13,22;UBERON:0003135,5.49e-10,11;UBERON:0005904,8.90e-10,4;UBERON:0004122,3.19e-09,15;UBERON:0004151,3.26e-09,3;UBERON:0003978,4.71e-09,3;UBERON:0009751,4.71e-09,3;UBERON:0000946,4.71e-09,3;UBERON:0002523,4.71e-09,3;UBERON:0005983,4.71e-09,3;UBERON:0002165,4.71e-09,3;UBERON:0002062,4.71e-09,3;UBERON:0007280,4.71e-09,3;UBERON:0001046,7.40e-09,19;UBERON:0003064,2.13e-08,28;UBERON:0005156,7.95e-08,59;UBERON:0000990,7.95e-08,59;UBERON:0004921,8.08e-08,118;UBERON:0006947,9.53e-08,3;UBERON:0004054,9.53e-08,3;UBERON:0000162,1.01e-07,14;UBERON:0001353,1.01e-07,14;UBERON:0000163,1.01e-07,14;UBERON:0006866,1.01e-07,14;UBERON:0000164,1.01e-07,14;UBERON:0000931,1.01e-07,14;UBERON:0001155,7.38e-07,9 | |||
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|short_description=p1@CHRDL2 | |||
}} |
Revision as of 19:39, 10 September 2013
Short description: | p1@CHRDL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CHRDL2_5end |
Coexpression cluster: | C2164_gall_uterus_cervix_left_dura_sacrococcigeal_epididymis |
Association with transcript: | -31bp_to_ENST00000376332_5end |
EntrezGene: | CHRDL2 |
HGNC: | 24168 |
UniProt: | Q6WN34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.00e-07 | 3 |
stromal cell | 9.50e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.68e-29 | 114 |
male organism | 2.74e-13 | 22 |
male reproductive system | 2.74e-13 | 22 |
male reproductive organ | 5.49e-10 | 11 |
duct of male reproductive system | 8.90e-10 | 4 |
genitourinary system | 3.19e-09 | 15 |
cardiac chamber | 3.26e-09 | 3 |
valve | 4.71e-09 | 3 |
cardiac mesenchyme | 4.71e-09 | 3 |
cardial valve | 4.71e-09 | 3 |
tunica intima | 4.71e-09 | 3 |
heart layer | 4.71e-09 | 3 |
endocardium | 4.71e-09 | 3 |
endocardial cushion | 4.71e-09 | 3 |
presumptive endocardium | 4.71e-09 | 3 |
hindgut | 7.40e-09 | 19 |
intermediate mesoderm | 2.13e-08 | 28 |
reproductive structure | 7.95e-08 | 59 |
reproductive system | 7.95e-08 | 59 |
subdivision of digestive tract | 8.08e-08 | 118 |
male genital duct | 9.53e-08 | 3 |
internal male genitalia | 9.53e-08 | 3 |
cloaca | 1.01e-07 | 14 |
anal region | 1.01e-07 | 14 |
embryonic cloaca | 1.01e-07 | 14 |
terminal part of digestive tract | 1.01e-07 | 14 |
primitive urogenital sinus | 1.01e-07 | 14 |
proctodeum | 1.01e-07 | 14 |
colon | 7.38e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.