FFCP PHASE1:Hg19::chr11:85448870..85448902,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54843|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=15585|TSSclassifier=N|UniProt=|association_with_transcript=-171bp_to_uc010rtf.1_5end|description=CAGE_peak_11_at_SYTL2_5end|id=chr11:85448870..85448902,-|ontology_enrichment_celltype=CL:0000791!5.36e-09!18;CL:0000789!5.36e-09!18;CL:0002420!5.36e-09!18;CL:0002419!5.36e-09!18;CL:0000790!5.36e-09!18;CL:0000842!4.69e-08!3;CL:0000625!1.81e-07!11;CL:0000084!2.53e-07!25;CL:0000827!2.53e-07!25|ontology_enrichment_celltype_v019=CL:1000415;9.53e-07;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006298;3.08e-12;1!UBERON:0007297;9.53e-07;2|ontology_enrichment_disease=DOID:1749!2.09e-09!14;DOID:305!2.79e-08!106|ontology_enrichment_disease_v019=DOID:5093;2.47e-12;4!DOID:1612;2.47e-12;4!DOID:4074;4.55e-07;2!DOID:4905;4.55e-07;2!DOID:3498;4.55e-07;2!DOID:3910;5.41e-07;2|ontology_enrichment_disease_v019_2=DOID:5093,2.61e-12,4;DOID:1612,2.61e-12,4;DOID:305,2.18e-07,106;DOID:4074,4.56e-07,2;DOID:4905,4.56e-07,2;DOID:3498,4.56e-07,2;DOID:3910,5.11e-07,2|ontology_enrichment_uberon=UBERON:0000974!1.69e-10!10;UBERON:0001007!1.99e-08!155;UBERON:0001555!1.99e-08!155;UBERON:0007026!1.99e-08!155;UBERON:0004921!2.26e-08!129;UBERON:0004185!2.26e-08!129;UBERON:0000077!2.42e-08!130;UBERON:0003408!4.54e-08!10;UBERON:0004119!1.15e-07!169;UBERON:0000925!1.15e-07!169;UBERON:0006595!1.15e-07!169;UBERON:0001004!5.71e-07!72;UBERON:0001041!8.34e-07!98|ontology_enrichment_uberon_v019=UBERON:0003127;5.47e-23;2!UBERON:0000341;5.47e-23;2!UBERON:0001736;3.08e-12;1!UBERON:0001301;3.08e-12;1!UBERON:0001044;2.17e-08;6!UBERON:0003293;2.17e-08;6!UBERON:0003294;2.17e-08;6!UBERON:0010047;2.17e-08;6!UBERON:0003408;2.17e-08;6!UBERON:0000167;2.17e-08;6!UBERON:0000974;2.71e-08;6!UBERON:0007196;3.01e-07;15!UBERON:0001558;3.01e-07;15!UBERON:0003126;3.14e-07;7!UBERON:0001005;3.14e-07;7!UBERON:0004903;5.41e-07;2!UBERON:0002173;5.41e-07;2!UBERON:0002186;5.41e-07;2!UBERON:0006562;9.53e-07;2!UBERON:0001829;9.53e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.49e-23,2;UBERON:0000341,4.37e-23,2;UBERON:0001736,2.46e-12,1;UBERON:0006298,2.46e-12,1;UBERON:0001301,3.08e-12,1;UBERON:0001044,2.02e-08,6;UBERON:0003293,2.02e-08,6;UBERON:0003294,2.02e-08,6;UBERON:0010047,2.02e-08,6;UBERON:0000167,2.02e-08,6;UBERON:0000915,2.08e-07,52;UBERON:0007196,2.71e-07,15;UBERON:0001558,2.71e-07,15;UBERON:0003126,2.77e-07,7;UBERON:0001005,2.77e-07,7;UBERON:0004903,5.11e-07,2;UBERON:0002173,5.11e-07,2;UBERON:0002186,5.11e-07,2;UBERON:0001829,8.52e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.383959833463255,0,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74122638775565,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.986434056369336,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,4.83081935556256,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04392628155523,0,0.789168805698781,0,0,0,0,0,1.32930774541437,0,0.313932918407225,0,0,0,0.694238953340524,0.881931576729399,0.34823682632161,1.39781334593624,0,0,0,0,0,0,0.225980740780532,0,0,0,1.17330829640882,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0.854299300541557,0.314408610199332,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15585 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-171bp_to_uc010rtf.1_5end | |||
|description=CAGE_peak_11_at_SYTL2_5end | |||
|id=chr11:85448870..85448902,- | |||
|ontology_enrichment_celltype=CL:0000791!5.36e-09!18;CL:0000789!5.36e-09!18;CL:0002420!5.36e-09!18;CL:0002419!5.36e-09!18;CL:0000790!5.36e-09!18;CL:0000842!4.69e-08!3;CL:0000625!1.81e-07!11;CL:0000084!2.53e-07!25;CL:0000827!2.53e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:1000415;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.08e-12;1!UBERON:0007297;9.53e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!2.09e-09!14;DOID:305!2.79e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.47e-12;4!DOID:1612;2.47e-12;4!DOID:4074;4.55e-07;2!DOID:4905;4.55e-07;2!DOID:3498;4.55e-07;2!DOID:3910;5.41e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.61e-12,4;DOID:1612,2.61e-12,4;DOID:305,2.18e-07,106;DOID:4074,4.56e-07,2;DOID:4905,4.56e-07,2;DOID:3498,4.56e-07,2;DOID:3910,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000974!1.69e-10!10;UBERON:0001007!1.99e-08!155;UBERON:0001555!1.99e-08!155;UBERON:0007026!1.99e-08!155;UBERON:0004921!2.26e-08!129;UBERON:0004185!2.26e-08!129;UBERON:0000077!2.42e-08!130;UBERON:0003408!4.54e-08!10;UBERON:0004119!1.15e-07!169;UBERON:0000925!1.15e-07!169;UBERON:0006595!1.15e-07!169;UBERON:0001004!5.71e-07!72;UBERON:0001041!8.34e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.47e-23;2!UBERON:0000341;5.47e-23;2!UBERON:0001736;3.08e-12;1!UBERON:0001301;3.08e-12;1!UBERON:0001044;2.17e-08;6!UBERON:0003293;2.17e-08;6!UBERON:0003294;2.17e-08;6!UBERON:0010047;2.17e-08;6!UBERON:0003408;2.17e-08;6!UBERON:0000167;2.17e-08;6!UBERON:0000974;2.71e-08;6!UBERON:0007196;3.01e-07;15!UBERON:0001558;3.01e-07;15!UBERON:0003126;3.14e-07;7!UBERON:0001005;3.14e-07;7!UBERON:0004903;5.41e-07;2!UBERON:0002173;5.41e-07;2!UBERON:0002186;5.41e-07;2!UBERON:0006562;9.53e-07;2!UBERON:0001829;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.49e-23,2;UBERON:0000341,4.37e-23,2;UBERON:0001736,2.46e-12,1;UBERON:0006298,2.46e-12,1;UBERON:0001301,3.08e-12,1;UBERON:0001044,2.02e-08,6;UBERON:0003293,2.02e-08,6;UBERON:0003294,2.02e-08,6;UBERON:0010047,2.02e-08,6;UBERON:0000167,2.02e-08,6;UBERON:0000915,2.08e-07,52;UBERON:0007196,2.71e-07,15;UBERON:0001558,2.71e-07,15;UBERON:0003126,2.77e-07,7;UBERON:0001005,2.77e-07,7;UBERON:0004903,5.11e-07,2;UBERON:0002173,5.11e-07,2;UBERON:0002186,5.11e-07,2;UBERON:0001829,8.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.383959833463255,0,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74122638775565,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.986434056369336,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,4.83081935556256,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04392628155523,0,0.789168805698781,0,0,0,0,0,1.32930774541437,0,0.313932918407225,0,0,0,0.694238953340524,0.881931576729399,0.34823682632161,1.39781334593624,0,0,0,0,0,0,0.225980740780532,0,0,0,1.17330829640882,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0.854299300541557,0.314408610199332,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0.49131575253029,0.295712172434091,0,0,0,0,0,0.548257766857182,0,0,1.53314913167514,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0.778619813244484,0.470958557103084,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,5.16272830584333,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,3.57107877211315,0,0.0802413666891683,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,1.91910583710883,2.14257988317366,0,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,2.79716601031438,1.99596213927608,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p11@SYTL2 | |||
}} |
Revision as of 20:02, 10 September 2013
Short description: | p11@SYTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SYTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_uc010rtf.1_5end |
EntrezGene: | SYTL2 |
HGNC: | 15585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.49e-23 | 2 |
throat | 4.37e-23 | 2 |
submandibular gland | 2.46e-12 | 1 |
submandibular gland primordium | 2.46e-12 | 1 |
epididymis | 3.08e-12 | 1 |
saliva-secreting gland | 2.02e-08 | 6 |
gland of oral region | 2.02e-08 | 6 |
gland of foregut | 2.02e-08 | 6 |
oral gland | 2.02e-08 | 6 |
oral cavity | 2.02e-08 | 6 |
thoracic segment of trunk | 2.08e-07 | 52 |
tracheobronchial tree | 2.71e-07 | 15 |
lower respiratory tract | 2.71e-07 | 15 |
trachea | 2.77e-07 | 7 |
respiratory airway | 2.77e-07 | 7 |
bronchoalveolar duct junction | 5.11e-07 | 2 |
alveolar duct | 5.11e-07 | 2 |
bronchiole | 5.11e-07 | 2 |
major salivary gland | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.61e-12 | 4 |
breast cancer | 2.61e-12 | 4 |
carcinoma | 2.18e-07 | 106 |
pancreas adenocarcinoma | 4.56e-07 | 2 |
pancreatic carcinoma | 4.56e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.56e-07 | 2 |
lung adenocarcinoma | 5.11e-07 | 2 |
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