FFCP PHASE1:Hg19::chr11:9797238..9797249,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-28bp_to_ENST00000534671_5end|coexpression_cluster_id=C3214|description=CAGE_peak_1_at_ENST00000534671_5end|id=chr11:9797238..9797249,+|ontology_enrichment_celltype=CL:0002537!3.26e-09!5;CL:0000055!5.78e-09!180|ontology_enrichment_celltype_v019=CL:0002537;3.46e-24;5!CL:0002622;3.31e-15;3!CL:0000197;7.87e-13;6!CL:0000098;7.87e-13;6!CL:0002167;7.87e-13;6!CL:0000349;2.03e-11;19!CL:1000487;1.64e-10;2|ontology_enrichment_celltype_v019_2=CL:0002537,2.80e-24,5;CL:0002622,3.57e-15,3;CL:0000197,8.51e-13,6;CL:0000098,8.51e-13,6;CL:0002167,8.51e-13,6;CL:0000349,2.20e-11,19;CL:1000487,1.17e-10,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004871!1.21e-07!8|ontology_enrichment_uberon_v019=UBERON:0000305;3.24e-17;7!UBERON:0005631;7.04e-17;10!UBERON:0000158;7.04e-17;10!UBERON:0002367;9.29e-11;11!UBERON:0010147;9.29e-11;11!UBERON:0003937;7.74e-10;12!UBERON:0005399;7.74e-10;12!UBERON:0000478;7.65e-09;24!UBERON:0003101;3.29e-07;22!UBERON:0000079;3.29e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004871,3.49e-21,8;UBERON:0000305,2.79e-17,7;UBERON:0005631,7.02e-12,14;UBERON:0000158,7.02e-12,14;UBERON:0004122,6.16e-11,15;UBERON:0002367,8.30e-11,11;UBERON:0010147,8.30e-11,11;UBERON:0009846,8.30e-11,11;UBERON:0003353,8.30e-11,11;UBERON:0004902,8.30e-11,11;UBERON:0003820,8.30e-11,11;UBERON:0009847,8.30e-11,11;UBERON:0003937,6.98e-10,12;UBERON:0005399,6.98e-10,12;UBERON:0000478,8.15e-09,24;UBERON:0000162,1.99e-08,14;UBERON:0001353,1.99e-08,14;UBERON:0000163,1.99e-08,14;UBERON:0006866,1.99e-08,14;UBERON:0000164,1.99e-08,14;UBERON:0000931,1.99e-08,14;UBERON:0003101,2.95e-07,22;UBERON:0000079,2.95e-07,22|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.756787138224657,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,2.13557388818567,1.27159140695737,0,0,0.515281080091258,0.744467425326359,0,0.194874010322397,0.252433774244115,1.47279837827679,10.6686397500416,0,0.10075209822764,0.508681776931463,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,8.51001973071586,6.24044621468197,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,3.74347550755453,2.3195768543631,1.41932173530541,3.27995961979597,0.902838299183157,0,0,0,0,2.43274120510632,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0,0,0.256278298511402,1.02341449813341,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,4.01850568576124,3.64182336013434,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.571890581771475,0.511795582622668,0,0,0,4.31693898199955,0.823611089208164,0.589062011728432,0,0,0,0.48763373908959,0,0,6.55199574758332,1.83827061539827,0,0,0.66343897524122,0,0,0,0,0,0,0.286822704408103,2.75097314836739,0,0.354761064070598,0.633322905892992,1.31717957183961,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,2.67268212749375,4.30024982938925,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,3.62501735124369,0,0,0,0,0,0.638002319463839,2.01514705484097,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0.0730893170861856,0,0,16.3273834379275,0.225980740780532,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,1.76675467895698,2.61507115780833,1.01998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,5.70238968918752,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,3.97520666736664,0,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_ENST00000534671_5end | |||
|coexpression_cluster_id=C3214 | |||
|description=CAGE_peak_1_at_ENST00000534671_5end | |||
|id=chr11:9797238..9797249,+ | |||
|ontology_enrichment_celltype=CL:0002537!3.26e-09!5;CL:0000055!5.78e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.46e-24;5!CL:0002622;3.31e-15;3!CL:0000197;7.87e-13;6!CL:0000098;7.87e-13;6!CL:0002167;7.87e-13;6!CL:0000349;2.03e-11;19!CL:1000487;1.64e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.80e-24,5;CL:0002622,3.57e-15,3;CL:0000197,8.51e-13,6;CL:0000098,8.51e-13,6;CL:0002167,8.51e-13,6;CL:0000349,2.20e-11,19;CL:1000487,1.17e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004871!1.21e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.24e-17;7!UBERON:0005631;7.04e-17;10!UBERON:0000158;7.04e-17;10!UBERON:0002367;9.29e-11;11!UBERON:0010147;9.29e-11;11!UBERON:0003937;7.74e-10;12!UBERON:0005399;7.74e-10;12!UBERON:0000478;7.65e-09;24!UBERON:0003101;3.29e-07;22!UBERON:0000079;3.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,3.49e-21,8;UBERON:0000305,2.79e-17,7;UBERON:0005631,7.02e-12,14;UBERON:0000158,7.02e-12,14;UBERON:0004122,6.16e-11,15;UBERON:0002367,8.30e-11,11;UBERON:0010147,8.30e-11,11;UBERON:0009846,8.30e-11,11;UBERON:0003353,8.30e-11,11;UBERON:0004902,8.30e-11,11;UBERON:0003820,8.30e-11,11;UBERON:0009847,8.30e-11,11;UBERON:0003937,6.98e-10,12;UBERON:0005399,6.98e-10,12;UBERON:0000478,8.15e-09,24;UBERON:0000162,1.99e-08,14;UBERON:0001353,1.99e-08,14;UBERON:0000163,1.99e-08,14;UBERON:0006866,1.99e-08,14;UBERON:0000164,1.99e-08,14;UBERON:0000931,1.99e-08,14;UBERON:0003101,2.95e-07,22;UBERON:0000079,2.95e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.756787138224657,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,2.13557388818567,1.27159140695737,0,0,0.515281080091258,0.744467425326359,0,0.194874010322397,0.252433774244115,1.47279837827679,10.6686397500416,0,0.10075209822764,0.508681776931463,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,8.51001973071586,6.24044621468197,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,3.74347550755453,2.3195768543631,1.41932173530541,3.27995961979597,0.902838299183157,0,0,0,0,2.43274120510632,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0,0,0.256278298511402,1.02341449813341,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,4.01850568576124,3.64182336013434,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.571890581771475,0.511795582622668,0,0,0,4.31693898199955,0.823611089208164,0.589062011728432,0,0,0,0.48763373908959,0,0,6.55199574758332,1.83827061539827,0,0,0.66343897524122,0,0,0,0,0,0,0.286822704408103,2.75097314836739,0,0.354761064070598,0.633322905892992,1.31717957183961,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,2.67268212749375,4.30024982938925,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,3.62501735124369,0,0,0,0,0,0.638002319463839,2.01514705484097,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0.0730893170861856,0,0,16.3273834379275,0.225980740780532,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,1.76675467895698,2.61507115780833,1.01998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,5.70238968918752,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,3.97520666736664,0,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,3.58286299828754,0,0.343395705182793,0,1.26184898228651,0,0.857766365499703,0,0,0.463044948647668,0.244736704506468,0.537266523244462,0.617602894321944,0.219284049578707,0,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,0.705351887381368,10.718591707362,0,0,0,0,0,0,0,0,0,6.96021367751668,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,2.40513409419076,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.275684698604535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000534671 | |||
}} |
Revision as of 20:19, 10 September 2013
Short description: | p1@ENST00000534671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000534671_5end |
Coexpression cluster: | C3214_oral_normal_Mesenchymal_Fibroblast_extraskeletal_Smooth_cervical |
Association with transcript: | -28bp_to_ENST00000534671_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.80e-24 | 5 |
prostate stromal cell | 3.57e-15 | 3 |
receptor cell | 8.51e-13 | 6 |
sensory epithelial cell | 8.51e-13 | 6 |
olfactory epithelial cell | 8.51e-13 | 6 |
extraembryonic cell | 2.20e-11 | 19 |
smooth muscle cell of prostate | 1.17e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 3.49e-21 | 8 |
amnion | 2.79e-17 | 7 |
extraembryonic membrane | 7.02e-12 | 14 |
membranous layer | 7.02e-12 | 14 |
genitourinary system | 6.16e-11 | 15 |
prostate gland | 8.30e-11 | 11 |
male accessory sex gland | 8.30e-11 | 11 |
embryonic cloacal epithelium | 8.30e-11 | 11 |
epithelium of hindgut | 8.30e-11 | 11 |
urogenital sinus epithelium | 8.30e-11 | 11 |
prostate bud | 8.30e-11 | 11 |
prostate field | 8.30e-11 | 11 |
sex gland | 6.98e-10 | 12 |
male reproductive gland | 6.98e-10 | 12 |
extraembryonic structure | 8.15e-09 | 24 |
cloaca | 1.99e-08 | 14 |
anal region | 1.99e-08 | 14 |
embryonic cloaca | 1.99e-08 | 14 |
terminal part of digestive tract | 1.99e-08 | 14 |
primitive urogenital sinus | 1.99e-08 | 14 |
proctodeum | 1.99e-08 | 14 |
male organism | 2.95e-07 | 22 |
male reproductive system | 2.95e-07 | 22 |
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