FFCP PHASE1:Hg19::chr12:114843816..114843832,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6910|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11604|TSSclassifier=S|UniProt=Q99593|association_with_transcript=56bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end|coexpression_cluster_id=C56|description=CAGE_peak_4_at_TBX5_5end|id=chr12:114843816..114843832,-|ontology_enrichment_celltype=CL:0002620!9.81e-20!23;CL:0000057!1.93e-12!75;CL:0000055!2.21e-07!180;CL:0002580!3.66e-07!3|ontology_enrichment_celltype_v019=CL:0002580;1.95e-17;3!CL:0002620;4.23e-14;23!CL:0002574;8.00e-07;1!CL:0002591;8.00e-07;1|ontology_enrichment_celltype_v019_2=CL:0002580,1.80e-17,3;CL:0002620,7.08e-14,23;CL:0002574,5.06e-07,1|ontology_enrichment_development_v019=UBERON:0004140;2.15e-07;1!UBERON:0000358;2.73e-07;1!UBERON:0010227;2.73e-07;1!UBERON:0005062;6.85e-07;4!UBERON:0007284;6.85e-07;4!UBERON:0010226;8.00e-07;1|ontology_enrichment_disease=DOID:17!7.22e-10!5;DOID:450!7.22e-10!5;DOID:66!7.22e-10!5;DOID:423!7.22e-10!5;DOID:0080000!7.22e-10!5;DOID:11722!7.22e-10!5|ontology_enrichment_disease_v019=DOID:114;5.22e-13;2!DOID:17;1.77e-10;5!DOID:450;1.77e-10;5!DOID:66;1.77e-10;5!DOID:423;1.77e-10;5!DOID:0080000;1.77e-10;5!DOID:11722;1.77e-10;5!DOID:178;2.73e-07;1!DOID:326;2.73e-07;1!DOID:3978;2.73e-07;1!DOID:3394;2.73e-07;1!DOID:5844;2.73e-07;1!DOID:1287;6.56e-07;4!DOID:6193;8.00e-07;1|ontology_enrichment_disease_v019_2=DOID:114,5.89e-13,2;DOID:17,4.56e-10,5;DOID:450,4.56e-10,5;DOID:66,4.56e-10,5;DOID:423,4.56e-10,5;DOID:0080000,4.56e-10,5;DOID:11722,4.56e-10,5;DOID:178,2.99e-07,1;DOID:326,2.99e-07,1;DOID:3978,2.99e-07,1;DOID:3394,2.99e-07,1;DOID:5844,2.99e-07,1;DOID:1287,6.97e-07,4|ontology_enrichment_uberon=UBERON:0007100!1.04e-16!27;UBERON:0002199!1.81e-12!45;UBERON:0002416!1.81e-12!45;UBERON:0000948!3.17e-12!24;UBERON:0005498!3.17e-12!24;UBERON:0004140!3.17e-12!24;UBERON:0009881!3.17e-12!24;UBERON:0004141!3.17e-12!24;UBERON:0003084!3.17e-12!24;UBERON:0007005!3.17e-12!24;UBERON:0004139!3.17e-12!24;UBERON:0004291!3.17e-12!24;UBERON:0002097!5.72e-12!40;UBERON:0007023!6.26e-08!115;UBERON:0003103!9.68e-08!69;UBERON:0003978!3.88e-07!3;UBERON:0009751!3.88e-07!3;UBERON:0000946!3.88e-07!3;UBERON:0002523!3.88e-07!3;UBERON:0005983!3.88e-07!3;UBERON:0002165!3.88e-07!3;UBERON:0002062!3.88e-07!3;UBERON:0007280!3.88e-07!3;UBERON:0004151!5.76e-07!3;UBERON:0000310!6.98e-07!10|ontology_enrichment_uberon_v019=UBERON:0007100;6.79e-14;25!UBERON:0000310;4.13e-09;10!UBERON:0003978;6.28e-09;3!UBERON:0000946;6.28e-09;3!UBERON:0004151;1.40e-08;3!UBERON:0001443;2.73e-08;11!UBERON:0002146;2.35e-07;1!UBERON:0005623;2.35e-07;1!UBERON:0002079;2.73e-07;1!UBERON:0002135;2.73e-07;1!UBERON:0002084;8.00e-07;1!UBERON:0002171;8.00e-07;1!UBERON:0002082;8.00e-07;1!UBERON:0006518;8.00e-07;1!UBERON:0008949;8.00e-07;1!UBERON:0000101;8.00e-07;1!UBERON:0002167;8.00e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.58e-16,27;UBERON:0000310,4.10e-09,10;UBERON:0003978,5.94e-09,3;UBERON:0009751,5.94e-09,3;UBERON:0000946,5.94e-09,3;UBERON:0002523,5.94e-09,3;UBERON:0005983,5.94e-09,3;UBERON:0002165,5.94e-09,3;UBERON:0002062,5.94e-09,3;UBERON:0007280,5.94e-09,3;UBERON:0004151,1.28e-08,3;UBERON:0001443,2.71e-08,11;UBERON:0000948,3.84e-08,24;UBERON:0005498,3.84e-08,24;UBERON:0004140,3.84e-08,24;UBERON:0009881,3.84e-08,24;UBERON:0004141,3.84e-08,24;UBERON:0003084,3.84e-08,24;UBERON:0007005,3.84e-08,24;UBERON:0004139,3.84e-08,24;UBERON:0004291,3.84e-08,24;UBERON:0002146,2.36e-07,1;UBERON:0005623,2.36e-07,1;UBERON:0002135,2.50e-07,1;UBERON:0002097,2.77e-07,41;UBERON:0002079,2.82e-07,1;UBERON:0002084,6.76e-07,1;UBERON:0002082,6.76e-07,1;UBERON:0010226,6.76e-07,1;UBERON:0002171,9.51e-07,1;UBERON:0006518,9.51e-07,1;UBERON:0008949,9.51e-07,1;UBERON:0000101,9.51e-07,1;UBERON:0002167,9.51e-07,1|phase1_expression=1.2717486548939,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0.795285947051099,1.94653948121054,0.189069634328136,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.640672166455702,1.05965950579781,1.20036438433761,1.03052529238439,1.03056216018252,0.18611685633159,1.35021065793013,0.876933046450788,1.51460264546469,0.736399189138395,0,1.77504796258307,0.906768884048762,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27523445472584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3009460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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |||
|TSSclassifier=S | |||
|UniProt=Q99593 | |||
|association_with_transcript=56bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_4_at_TBX5_5end | |||
|id=chr12:114843816..114843832,- | |||
|ontology_enrichment_celltype=CL:0002620!9.81e-20!23;CL:0000057!1.93e-12!75;CL:0000055!2.21e-07!180;CL:0002580!3.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.95e-17;3!CL:0002620;4.23e-14;23!CL:0002574;8.00e-07;1!CL:0002591;8.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.80e-17,3;CL:0002620,7.08e-14,23;CL:0002574,5.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.15e-07;1!UBERON:0000358;2.73e-07;1!UBERON:0010227;2.73e-07;1!UBERON:0005062;6.85e-07;4!UBERON:0007284;6.85e-07;4!UBERON:0010226;8.00e-07;1 | |||
|ontology_enrichment_disease=DOID:17!7.22e-10!5;DOID:450!7.22e-10!5;DOID:66!7.22e-10!5;DOID:423!7.22e-10!5;DOID:0080000!7.22e-10!5;DOID:11722!7.22e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:114;5.22e-13;2!DOID:17;1.77e-10;5!DOID:450;1.77e-10;5!DOID:66;1.77e-10;5!DOID:423;1.77e-10;5!DOID:0080000;1.77e-10;5!DOID:11722;1.77e-10;5!DOID:178;2.73e-07;1!DOID:326;2.73e-07;1!DOID:3978;2.73e-07;1!DOID:3394;2.73e-07;1!DOID:5844;2.73e-07;1!DOID:1287;6.56e-07;4!DOID:6193;8.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.89e-13,2;DOID:17,4.56e-10,5;DOID:450,4.56e-10,5;DOID:66,4.56e-10,5;DOID:423,4.56e-10,5;DOID:0080000,4.56e-10,5;DOID:11722,4.56e-10,5;DOID:178,2.99e-07,1;DOID:326,2.99e-07,1;DOID:3978,2.99e-07,1;DOID:3394,2.99e-07,1;DOID:5844,2.99e-07,1;DOID:1287,6.97e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.04e-16!27;UBERON:0002199!1.81e-12!45;UBERON:0002416!1.81e-12!45;UBERON:0000948!3.17e-12!24;UBERON:0005498!3.17e-12!24;UBERON:0004140!3.17e-12!24;UBERON:0009881!3.17e-12!24;UBERON:0004141!3.17e-12!24;UBERON:0003084!3.17e-12!24;UBERON:0007005!3.17e-12!24;UBERON:0004139!3.17e-12!24;UBERON:0004291!3.17e-12!24;UBERON:0002097!5.72e-12!40;UBERON:0007023!6.26e-08!115;UBERON:0003103!9.68e-08!69;UBERON:0003978!3.88e-07!3;UBERON:0009751!3.88e-07!3;UBERON:0000946!3.88e-07!3;UBERON:0002523!3.88e-07!3;UBERON:0005983!3.88e-07!3;UBERON:0002165!3.88e-07!3;UBERON:0002062!3.88e-07!3;UBERON:0007280!3.88e-07!3;UBERON:0004151!5.76e-07!3;UBERON:0000310!6.98e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.79e-14;25!UBERON:0000310;4.13e-09;10!UBERON:0003978;6.28e-09;3!UBERON:0000946;6.28e-09;3!UBERON:0004151;1.40e-08;3!UBERON:0001443;2.73e-08;11!UBERON:0002146;2.35e-07;1!UBERON:0005623;2.35e-07;1!UBERON:0002079;2.73e-07;1!UBERON:0002135;2.73e-07;1!UBERON:0002084;8.00e-07;1!UBERON:0002171;8.00e-07;1!UBERON:0002082;8.00e-07;1!UBERON:0006518;8.00e-07;1!UBERON:0008949;8.00e-07;1!UBERON:0000101;8.00e-07;1!UBERON:0002167;8.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.58e-16,27;UBERON:0000310,4.10e-09,10;UBERON:0003978,5.94e-09,3;UBERON:0009751,5.94e-09,3;UBERON:0000946,5.94e-09,3;UBERON:0002523,5.94e-09,3;UBERON:0005983,5.94e-09,3;UBERON:0002165,5.94e-09,3;UBERON:0002062,5.94e-09,3;UBERON:0007280,5.94e-09,3;UBERON:0004151,1.28e-08,3;UBERON:0001443,2.71e-08,11;UBERON:0000948,3.84e-08,24;UBERON:0005498,3.84e-08,24;UBERON:0004140,3.84e-08,24;UBERON:0009881,3.84e-08,24;UBERON:0004141,3.84e-08,24;UBERON:0003084,3.84e-08,24;UBERON:0007005,3.84e-08,24;UBERON:0004139,3.84e-08,24;UBERON:0004291,3.84e-08,24;UBERON:0002146,2.36e-07,1;UBERON:0005623,2.36e-07,1;UBERON:0002135,2.50e-07,1;UBERON:0002097,2.77e-07,41;UBERON:0002079,2.82e-07,1;UBERON:0002084,6.76e-07,1;UBERON:0002082,6.76e-07,1;UBERON:0010226,6.76e-07,1;UBERON:0002171,9.51e-07,1;UBERON:0006518,9.51e-07,1;UBERON:0008949,9.51e-07,1;UBERON:0000101,9.51e-07,1;UBERON:0002167,9.51e-07,1 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0.795285947051099,1.94653948121054,0.189069634328136,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.640672166455702,1.05965950579781,1.20036438433761,1.03052529238439,1.03056216018252,0.18611685633159,1.35021065793013,0.876933046450788,1.51460264546469,0.736399189138395,0,1.77504796258307,0.906768884048762,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27523445472584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,1.65078867489357,0.391602314925481,0,0,0,0,0,0,0,1.24053903909388,2.14846762603287,1.40330047216537,0,0,0,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,2.1396949401696,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0.872901148395775,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74780082162832,5.04152932825704,0.717873024576814,4.19325901047881,6.86761677018513,3.79391477651183,6.9198976661328,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,4.2881719582402,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,3.30129040709298,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0.228840068396924,0.453692771289717,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0.657852148736121,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29389773676018,0,0,0.169732529954025,1.91317428091515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0.992422356778588,1.93458368795583,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,1.25588948560822,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.397901550322736,0,0,0,0.452888530700021,0,0,0,1.47088993052343,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0,0,0,0,0,0,0.502055437748735,0.99798106963804,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p4@TBX5 | |||
}} |
Revision as of 21:02, 10 September 2013
Short description: | p4@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TBX5_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 56bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.80e-17 | 3 |
skin fibroblast | 7.08e-14 | 23 |
stromal cell of pancreas | 5.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.58e-16 | 27 |
breast | 4.10e-09 | 10 |
valve | 5.94e-09 | 3 |
cardiac mesenchyme | 5.94e-09 | 3 |
cardial valve | 5.94e-09 | 3 |
tunica intima | 5.94e-09 | 3 |
heart layer | 5.94e-09 | 3 |
endocardium | 5.94e-09 | 3 |
endocardial cushion | 5.94e-09 | 3 |
presumptive endocardium | 5.94e-09 | 3 |
cardiac chamber | 1.28e-08 | 3 |
chest | 2.71e-08 | 11 |
heart | 3.84e-08 | 24 |
primitive heart tube | 3.84e-08 | 24 |
primary heart field | 3.84e-08 | 24 |
anterior lateral plate mesoderm | 3.84e-08 | 24 |
heart tube | 3.84e-08 | 24 |
heart primordium | 3.84e-08 | 24 |
cardiac mesoderm | 3.84e-08 | 24 |
cardiogenic plate | 3.84e-08 | 24 |
heart rudiment | 3.84e-08 | 24 |
pulmonary valve | 2.36e-07 | 1 |
semi-lunar valve | 2.36e-07 | 1 |
mitral valve | 2.50e-07 | 1 |
skin of body | 2.77e-07 | 41 |
left cardiac atrium | 2.82e-07 | 1 |
heart left ventricle | 6.76e-07 | 1 |
cardiac ventricle | 6.76e-07 | 1 |
future cardiac ventricle | 6.76e-07 | 1 |
lower lobe of right lung | 9.51e-07 | 1 |
right lung lobe | 9.51e-07 | 1 |
lower lobe of lung | 9.51e-07 | 1 |
lobe of lung | 9.51e-07 | 1 |
right lung | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.89e-13 | 2 |
musculoskeletal system disease | 4.56e-10 | 5 |
myotonic disease | 4.56e-10 | 5 |
muscle tissue disease | 4.56e-10 | 5 |
myopathy | 4.56e-10 | 5 |
muscular disease | 4.56e-10 | 5 |
myotonic dystrophy | 4.56e-10 | 5 |
vascular disease | 2.99e-07 | 1 |
ischemia | 2.99e-07 | 1 |
extrinsic cardiomyopathy | 2.99e-07 | 1 |
myocardial ischemia | 2.99e-07 | 1 |
myocardial infarction | 2.99e-07 | 1 |
cardiovascular system disease | 6.97e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.