FFCP PHASE1:Hg19::chr12:52473530..52473552,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=50bp_to_ENST00000546390,uc009zme.1_5end|description=CAGE_peak_1_at_ENST00000546390_5end,CAGE_peak_1_at_uc009zme.1_5end|id=chr12:52473530..52473552,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002504;1.37e-10;3!CL:1000279;1.37e-10;3!CL:1000280;1.37e-10;3!CL:0000784;2.92e-09;3!CL:1000487;6.10e-07;2!CL:0002598;7.84e-07;2|ontology_enrichment_celltype_v019_2=CL:0002504,1.27e-10,3;CL:1000279,1.27e-10,3;CL:1000280,1.27e-10,3;CL:0000784,3.06e-09,3;CL:0002598,6.38e-07,2;CL:1000487,6.77e-07,2|ontology_enrichment_development_v019=UBERON:0004872;3.08e-10;7!UBERON:0005062;1.55e-07;4!UBERON:0007284;1.55e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.01e-48!115;UBERON:0000059!4.80e-09!11;UBERON:0001049!8.06e-09!57;UBERON:0005068!8.06e-09!57;UBERON:0006241!8.06e-09!57;UBERON:0007135!8.06e-09!57;UBERON:0003075!8.85e-09!86;UBERON:0007284!8.85e-09!86;UBERON:0001950!9.04e-09!20;UBERON:0001155!9.21e-09!9;UBERON:0000481!9.62e-09!347;UBERON:0005409!1.19e-08!35;UBERON:0002346!5.05e-08!90;UBERON:0000062!5.27e-08!511;UBERON:0000160!7.41e-08!27;UBERON:0002619!1.01e-07!22;UBERON:0004921!1.35e-07!129;UBERON:0004185!1.35e-07!129;UBERON:0001017!1.45e-07!82;UBERON:0005743!1.61e-07!86;UBERON:0000468!1.80e-07!659;UBERON:0002020!2.62e-07!34;UBERON:0003528!2.62e-07!34;UBERON:0001893!2.87e-07!34;UBERON:0002780!4.55e-07!41;UBERON:0001890!4.55e-07!41;UBERON:0006240!4.55e-07!41;UBERON:0003080!8.50e-07!42|ontology_enrichment_uberon_v019=UBERON:0000160;5.52e-18;17!UBERON:0000059;7.64e-17;11!UBERON:0005409;2.68e-16;22!UBERON:0001155;5.35e-16;9!UBERON:0004921;4.64e-15;33!UBERON:0003978;6.23e-10;3!UBERON:0000946;6.23e-10;3!UBERON:0003101;5.81e-08;22!UBERON:0000079;5.81e-08;22!UBERON:0000077;1.36e-07;27!UBERON:0002133;2.53e-07;2!UBERON:0002367;5.86e-07;11!UBERON:0010147;5.86e-07;11!UBERON:0003127;7.84e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.00e-21,114;UBERON:0005409,1.12e-19,25;UBERON:0000160,4.78e-18,17;UBERON:0004921,1.36e-17,118;UBERON:0000059,6.89e-17,11;UBERON:0001155,4.73e-16,9;UBERON:0001007,7.99e-14,145;UBERON:0001555,7.99e-14,145;UBERON:0007026,7.99e-14,145;UBERON:0004119,8.89e-14,160;UBERON:0000925,8.89e-14,160;UBERON:0006595,8.89e-14,160;UBERON:0001046,1.53e-11,19;UBERON:0003978,6.24e-10,3;UBERON:0009751,6.24e-10,3;UBERON:0000946,6.24e-10,3;UBERON:0002523,6.24e-10,3;UBERON:0005983,6.24e-10,3;UBERON:0002165,6.24e-10,3;UBERON:0002062,6.24e-10,3;UBERON:0007280,6.24e-10,3;UBERON:0000162,6.82e-10,14;UBERON:0001353,6.82e-10,14;UBERON:0000163,6.82e-10,14;UBERON:0006866,6.82e-10,14;UBERON:0000164,6.82e-10,14;UBERON:0000931,6.82e-10,14;UBERON:0011216,3.12e-09,223;UBERON:0004122,3.70e-09,15;UBERON:0003101,5.99e-08,22;UBERON:0000079,5.99e-08,22;UBERON:0002133,2.58e-07,2;UBERON:0005178,4.31e-07,34;UBERON:0002224,4.31e-07,34;UBERON:0000077,5.66e-07,29;UBERON:0002367,6.14e-07,11;UBERON:0010147,6.14e-07,11;UBERON:0009846,6.14e-07,11;UBERON:0003353,6.14e-07,11;UBERON:0004902,6.14e-07,11;UBERON:0003820,6.14e-07,11;UBERON:0009847,6.14e-07,11;UBERON:0005181,7.83e-07,35;UBERON:0003127,8.08e-07,2|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,10.0853888133239,0,0,0,0,0,4.29283123749616,3.43196946468077,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,2.73048408581408,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,12.7444037462713,0,14.4236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,4.60616024360401,2.99557291623744,0,0,51.443522868828,13.7268514868027,10.3674914064204,0,0,0,13.1661109554189,0,0,2.04749867111979,6.6460553018245,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,0,13.5108886590505,1.31717957183961,0.379473173765715,0.699869440489966,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENST00000546390,uc009zme.1_5end | |||
|description=CAGE_peak_1_at_ENST00000546390_5end,CAGE_peak_1_at_uc009zme.1_5end | |||
|id=chr12:52473530..52473552,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002504;1.37e-10;3!CL:1000279;1.37e-10;3!CL:1000280;1.37e-10;3!CL:0000784;2.92e-09;3!CL:1000487;6.10e-07;2!CL:0002598;7.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,1.27e-10,3;CL:1000279,1.27e-10,3;CL:1000280,1.27e-10,3;CL:0000784,3.06e-09,3;CL:0002598,6.38e-07,2;CL:1000487,6.77e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.08e-10;7!UBERON:0005062;1.55e-07;4!UBERON:0007284;1.55e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-48!115;UBERON:0000059!4.80e-09!11;UBERON:0001049!8.06e-09!57;UBERON:0005068!8.06e-09!57;UBERON:0006241!8.06e-09!57;UBERON:0007135!8.06e-09!57;UBERON:0003075!8.85e-09!86;UBERON:0007284!8.85e-09!86;UBERON:0001950!9.04e-09!20;UBERON:0001155!9.21e-09!9;UBERON:0000481!9.62e-09!347;UBERON:0005409!1.19e-08!35;UBERON:0002346!5.05e-08!90;UBERON:0000062!5.27e-08!511;UBERON:0000160!7.41e-08!27;UBERON:0002619!1.01e-07!22;UBERON:0004921!1.35e-07!129;UBERON:0004185!1.35e-07!129;UBERON:0001017!1.45e-07!82;UBERON:0005743!1.61e-07!86;UBERON:0000468!1.80e-07!659;UBERON:0002020!2.62e-07!34;UBERON:0003528!2.62e-07!34;UBERON:0001893!2.87e-07!34;UBERON:0002780!4.55e-07!41;UBERON:0001890!4.55e-07!41;UBERON:0006240!4.55e-07!41;UBERON:0003080!8.50e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.52e-18;17!UBERON:0000059;7.64e-17;11!UBERON:0005409;2.68e-16;22!UBERON:0001155;5.35e-16;9!UBERON:0004921;4.64e-15;33!UBERON:0003978;6.23e-10;3!UBERON:0000946;6.23e-10;3!UBERON:0003101;5.81e-08;22!UBERON:0000079;5.81e-08;22!UBERON:0000077;1.36e-07;27!UBERON:0002133;2.53e-07;2!UBERON:0002367;5.86e-07;11!UBERON:0010147;5.86e-07;11!UBERON:0003127;7.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.00e-21,114;UBERON:0005409,1.12e-19,25;UBERON:0000160,4.78e-18,17;UBERON:0004921,1.36e-17,118;UBERON:0000059,6.89e-17,11;UBERON:0001155,4.73e-16,9;UBERON:0001007,7.99e-14,145;UBERON:0001555,7.99e-14,145;UBERON:0007026,7.99e-14,145;UBERON:0004119,8.89e-14,160;UBERON:0000925,8.89e-14,160;UBERON:0006595,8.89e-14,160;UBERON:0001046,1.53e-11,19;UBERON:0003978,6.24e-10,3;UBERON:0009751,6.24e-10,3;UBERON:0000946,6.24e-10,3;UBERON:0002523,6.24e-10,3;UBERON:0005983,6.24e-10,3;UBERON:0002165,6.24e-10,3;UBERON:0002062,6.24e-10,3;UBERON:0007280,6.24e-10,3;UBERON:0000162,6.82e-10,14;UBERON:0001353,6.82e-10,14;UBERON:0000163,6.82e-10,14;UBERON:0006866,6.82e-10,14;UBERON:0000164,6.82e-10,14;UBERON:0000931,6.82e-10,14;UBERON:0011216,3.12e-09,223;UBERON:0004122,3.70e-09,15;UBERON:0003101,5.99e-08,22;UBERON:0000079,5.99e-08,22;UBERON:0002133,2.58e-07,2;UBERON:0005178,4.31e-07,34;UBERON:0002224,4.31e-07,34;UBERON:0000077,5.66e-07,29;UBERON:0002367,6.14e-07,11;UBERON:0010147,6.14e-07,11;UBERON:0009846,6.14e-07,11;UBERON:0003353,6.14e-07,11;UBERON:0004902,6.14e-07,11;UBERON:0003820,6.14e-07,11;UBERON:0009847,6.14e-07,11;UBERON:0005181,7.83e-07,35;UBERON:0003127,8.08e-07,2 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,10.0853888133239,0,0,0,0,0,4.29283123749616,3.43196946468077,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,2.73048408581408,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,12.7444037462713,0,14.4236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,4.60616024360401,2.99557291623744,0,0,51.443522868828,13.7268514868027,10.3674914064204,0,0,0,13.1661109554189,0,0,2.04749867111979,6.6460553018245,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,0,13.5108886590505,1.31717957183961,0.379473173765715,0.699869440489966,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,4.42054264849836,0,0,0,0,0,0,0,6.21453455512682,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,2.00070672109872,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,2.12298154808014,3.66618086960175,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,4.17052770900203,0,1.12990370390266,0,0,0.189932387867636,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58564802544508,3.43740636017525,10.0502223440754,0.798716001995964,2.14613024068285,2.90122894674434,2.48578848200887,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0,0,0.0607495566580247,0,0.157611414598396,1.41627387964495,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0,36.8416573358547,27.3535490873419,27.3397776529149,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.625954653532499,0,0.443716206147409,0.683060432355218,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.638535436228605,0.82046545696302,0,1.38314504928436,0,0,0,0,0,0,0,0,0,5.26472298444801,0,0.781514011233092,0,0,0,0.135075169236789,0,0.413373593002368,0.0634158101939068,0,0,6.45074531906083,0,0,0,0,0.606965604236632,0.455324382702595,0.620916591138472,0,0,0,0.197318320688547,0,0,22.9199831123501,0,0,8.21842848458546,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.513314034281235,0,0.485710993059139,0,0,0,0,0,0,1.92935395269862,3.27839340755936,0,5.14811475683202,0,1.76677620403451,0.297046400327086,0.4226557275834,0,10.244247059804,4.70542582207113,0,0,0,0,8.76403665895821,0,1.57673541466596,0,0.0679914901909147,0,2.645134202577,0,6.00828317220844,0.865253124247578,0,0,0,0,0,0,0,25.5374212995467,15.2739554189022,0,0,2.77204176471275,0.714193294391221,0,0.434523000071005,0,0.25458863311266,0.202117188958219,0.435433495793923,1.71116650542641,2.89613827962726,2.07994395638761,4.9899053481902,0,0,0,0,0,0.733448665097199,0.406896178315738,1.99727032255654,1.40891655513718,0 | |||
|short_description=p1@ENST00000546390,p1@uc009zme.1 | |||
}} |
Revision as of 23:06, 10 September 2013
Short description: | p1@ENST00000546390, p1@uc009zme.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000546390_5end, CAGE_peak_1_at_uc009zme.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000546390, uc009zme.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 1.27e-10 | 3 |
smooth muscle cell of large intestine | 1.27e-10 | 3 |
smooth muscle cell of colon | 1.27e-10 | 3 |
plasmacytoid dendritic cell | 3.06e-09 | 3 |
bronchial smooth muscle cell | 6.38e-07 | 2 |
smooth muscle cell of prostate | 6.77e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.