FFCP PHASE1:Hg19::chr12:57871825..57871837,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64333|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14130|TSSclassifier=S|UniProt=F8VW89|association_with_transcript=4bp_to_ENST00000548139_5end|description=CAGE_peak_9_at_ARHGAP9_5end|id=chr12:57871825..57871837,-|ontology_enrichment_celltype=CL:0000037!3.19e-65!172;CL:0000566!3.19e-65!172;CL:0000988!9.70e-60!182;CL:0002032!1.76e-57!165;CL:0000837!1.76e-57!165;CL:0000738!1.63e-56!140;CL:0002087!2.40e-46!119;CL:0002031!2.18e-41!124;CL:0000763!1.66e-31!112;CL:0000049!1.66e-31!112;CL:0000766!1.53e-25!76;CL:0000542!2.43e-23!53;CL:0000051!2.43e-23!53;CL:0000838!2.15e-22!52;CL:0000791!2.08e-21!18;CL:0000789!2.08e-21!18;CL:0002420!2.08e-21!18;CL:0002419!2.08e-21!18;CL:0000790!2.08e-21!18;CL:0002057!5.08e-21!42;CL:0000557!1.85e-20!71;CL:0002009!1.64e-19!65;CL:0002194!2.14e-19!63;CL:0000576!2.14e-19!63;CL:0000040!2.14e-19!63;CL:0000559!2.14e-19!63;CL:0000860!6.17e-19!45;CL:0000839!1.69e-18!70;CL:0000084!5.87e-17!25;CL:0000827!5.87e-17!25;CL:0000134!1.81e-14!358;CL:0000625!1.02e-13!11;CL:0002320!1.24e-13!365;CL:0000219!9.35e-11!390;CL:0000094!1.05e-08!8;CL:0000624!1.29e-08!6;CL:0002393!3.36e-08!9;CL:0002397!3.36e-08!9;CL:0000034!1.12e-07!444;CL:0000048!1.72e-07!430;CL:0000723!4.77e-07!436|ontology_enrichment_celltype_v019=CL:0000791;4.60e-15;18!CL:0000789;4.60e-15;18!CL:0002419;4.60e-15;18!CL:0000775;9.74e-13;3!CL:0000898;2.59e-12;3!CL:0000094;6.78e-12;8!CL:0000624;2.15e-10;6!CL:0000084;2.21e-10;25!CL:0000815;1.25e-08;2!CL:0000792;1.25e-08;2!CL:0002677;1.25e-08;2!CL:0000081;1.48e-08;11!CL:0000625;5.00e-08;11|ontology_enrichment_celltype_v019_2=CL:0000037,8.41e-16,168;CL:0000791,3.89e-15,18;CL:0000789,3.89e-15,18;CL:0002420,3.89e-15,18;CL:0002419,3.89e-15,18;CL:0000790,3.89e-15,18;CL:0000988,1.32e-14,177;CL:0000775,6.19e-13,3;CL:0000898,2.78e-12,3;CL:0000094,4.14e-12,8;CL:0002032,4.24e-12,161;CL:0000837,4.24e-12,161;CL:0000738,8.63e-12,136;CL:0000624,1.40e-10,6;CL:0000084,1.97e-10,25;CL:0000827,1.97e-10,25;CL:0000838,3.65e-09,52;CL:0000542,6.14e-09,53;CL:0000051,6.14e-09,53;CL:0000081,1.05e-08,11;CL:0000815,1.19e-08,2;CL:0000792,1.19e-08,2;CL:0002677,1.19e-08,2;CL:0000625,5.66e-08,11;CL:0002087,7.46e-07,115|ontology_enrichment_development_v019=CL:0000790;4.60e-15;18|ontology_enrichment_disease=DOID:1240!1.22e-09!39;DOID:8692!9.53e-09!31;DOID:2531!2.74e-08!51;DOID:0060083!2.74e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.72e-29!102;UBERON:0003061!8.72e-29!102;UBERON:0002193!1.03e-25!112;UBERON:0002371!6.69e-18!80;UBERON:0001474!9.83e-16!86;UBERON:0002405!1.04e-14!115;UBERON:0002384!5.99e-13!375;UBERON:0004765!3.30e-12!101;UBERON:0001434!3.30e-12!101;UBERON:0000178!8.51e-08!15;UBERON:0000179!8.51e-08!15;UBERON:0000463!8.51e-08!15|ontology_enrichment_uberon_v019=UBERON:0002390;7.97e-09;32!UBERON:0000178;2.01e-08;15!UBERON:0000179;2.01e-08;15!UBERON:0000463;2.01e-08;15!UBERON:0002370;3.23e-08;2!UBERON:0005058;3.23e-08;2!UBERON:0009113;3.23e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.08e-08,4;UBERON:0005058,1.08e-08,4;UBERON:0009113,1.08e-08,4;UBERON:0003295,1.08e-08,4;UBERON:0005562,1.08e-08,4;UBERON:0000178,2.29e-08,15;UBERON:0000179,2.29e-08,15;UBERON:0000463,2.29e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.410502947249729,0.472264687882075,1.57345710739562,0.767658796194425,0.619264493264304,0,0,0,0.387336002901508,0,1.46800219667424,1.66198622559563,0.601633342410425,0.651032612147555,0.223915474239924,0.32389366601898,0,0.726991193897824,0.377875943688809,0,0.232429036905685,0,0.619412741790207,0.575384784644301,0.512321413058201,0.236482229888585,0,0,0,0.941211697713023,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0.997318288108159,0.426224750532694,0.290209238628584,0,0,1.25624332628372,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.632924774881769,0.633765858935825,0.425208599930087,0,0.561643155732475,1.20141514273205,1.12507910687956,0.570025487482497,1.19350006319454,0.730656615058536,0,0.546138611262131,0.889509253863555,0.426730222566507,0,1.72425731986345,0.661044872784862,0,1.1384259382189,1.76171156811282,0,3.96513985737078,0.560508562981536,0.790152254325231,1.7703879310245,0.393010762749165,0.822405995998037,1.67186495390678,2.28145586643513,3.31413464014313,5.84480185223734,2.67385096524417,1.47302953737419,0.443067789167242,0,1.66518715643378,1.56071217071854,2.63100647365882,1.65810010671509,0.579606171470105,2.37258501059297,1.07016331235885,0,1.13309342697566,2.29932296161153,1.37450978193052,1.26509846009751,1.59282707162048,0.651083453856419,0.950452044448374,0.903450714466637,0.895906278080929,1.24930726552346,0.947109008176067,1.64225599384209,1.20964045934839,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,1.71598473234038,1.11437250398869,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |||
|TSSclassifier=S | |||
|UniProt=F8VW89 | |||
|association_with_transcript=4bp_to_ENST00000548139_5end | |||
|description=CAGE_peak_9_at_ARHGAP9_5end | |||
|id=chr12:57871825..57871837,- | |||
|ontology_enrichment_celltype=CL:0000037!3.19e-65!172;CL:0000566!3.19e-65!172;CL:0000988!9.70e-60!182;CL:0002032!1.76e-57!165;CL:0000837!1.76e-57!165;CL:0000738!1.63e-56!140;CL:0002087!2.40e-46!119;CL:0002031!2.18e-41!124;CL:0000763!1.66e-31!112;CL:0000049!1.66e-31!112;CL:0000766!1.53e-25!76;CL:0000542!2.43e-23!53;CL:0000051!2.43e-23!53;CL:0000838!2.15e-22!52;CL:0000791!2.08e-21!18;CL:0000789!2.08e-21!18;CL:0002420!2.08e-21!18;CL:0002419!2.08e-21!18;CL:0000790!2.08e-21!18;CL:0002057!5.08e-21!42;CL:0000557!1.85e-20!71;CL:0002009!1.64e-19!65;CL:0002194!2.14e-19!63;CL:0000576!2.14e-19!63;CL:0000040!2.14e-19!63;CL:0000559!2.14e-19!63;CL:0000860!6.17e-19!45;CL:0000839!1.69e-18!70;CL:0000084!5.87e-17!25;CL:0000827!5.87e-17!25;CL:0000134!1.81e-14!358;CL:0000625!1.02e-13!11;CL:0002320!1.24e-13!365;CL:0000219!9.35e-11!390;CL:0000094!1.05e-08!8;CL:0000624!1.29e-08!6;CL:0002393!3.36e-08!9;CL:0002397!3.36e-08!9;CL:0000034!1.12e-07!444;CL:0000048!1.72e-07!430;CL:0000723!4.77e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.60e-15;18!CL:0000789;4.60e-15;18!CL:0002419;4.60e-15;18!CL:0000775;9.74e-13;3!CL:0000898;2.59e-12;3!CL:0000094;6.78e-12;8!CL:0000624;2.15e-10;6!CL:0000084;2.21e-10;25!CL:0000815;1.25e-08;2!CL:0000792;1.25e-08;2!CL:0002677;1.25e-08;2!CL:0000081;1.48e-08;11!CL:0000625;5.00e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.41e-16,168;CL:0000791,3.89e-15,18;CL:0000789,3.89e-15,18;CL:0002420,3.89e-15,18;CL:0002419,3.89e-15,18;CL:0000790,3.89e-15,18;CL:0000988,1.32e-14,177;CL:0000775,6.19e-13,3;CL:0000898,2.78e-12,3;CL:0000094,4.14e-12,8;CL:0002032,4.24e-12,161;CL:0000837,4.24e-12,161;CL:0000738,8.63e-12,136;CL:0000624,1.40e-10,6;CL:0000084,1.97e-10,25;CL:0000827,1.97e-10,25;CL:0000838,3.65e-09,52;CL:0000542,6.14e-09,53;CL:0000051,6.14e-09,53;CL:0000081,1.05e-08,11;CL:0000815,1.19e-08,2;CL:0000792,1.19e-08,2;CL:0002677,1.19e-08,2;CL:0000625,5.66e-08,11;CL:0002087,7.46e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.60e-15;18 | |||
|ontology_enrichment_disease=DOID:1240!1.22e-09!39;DOID:8692!9.53e-09!31;DOID:2531!2.74e-08!51;DOID:0060083!2.74e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.72e-29!102;UBERON:0003061!8.72e-29!102;UBERON:0002193!1.03e-25!112;UBERON:0002371!6.69e-18!80;UBERON:0001474!9.83e-16!86;UBERON:0002405!1.04e-14!115;UBERON:0002384!5.99e-13!375;UBERON:0004765!3.30e-12!101;UBERON:0001434!3.30e-12!101;UBERON:0000178!8.51e-08!15;UBERON:0000179!8.51e-08!15;UBERON:0000463!8.51e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;7.97e-09;32!UBERON:0000178;2.01e-08;15!UBERON:0000179;2.01e-08;15!UBERON:0000463;2.01e-08;15!UBERON:0002370;3.23e-08;2!UBERON:0005058;3.23e-08;2!UBERON:0009113;3.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.08e-08,4;UBERON:0005058,1.08e-08,4;UBERON:0009113,1.08e-08,4;UBERON:0003295,1.08e-08,4;UBERON:0005562,1.08e-08,4;UBERON:0000178,2.29e-08,15;UBERON:0000179,2.29e-08,15;UBERON:0000463,2.29e-08,15 | |||
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|short_description=p9@ARHGAP9 | |||
}} |
Revision as of 23:40, 10 September 2013
Short description: | p9@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ARHGAP9_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000548139_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | F8VW89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.41e-16 | 168 |
mature alpha-beta T cell | 3.89e-15 | 18 |
alpha-beta T cell | 3.89e-15 | 18 |
immature T cell | 3.89e-15 | 18 |
mature T cell | 3.89e-15 | 18 |
immature alpha-beta T cell | 3.89e-15 | 18 |
hematopoietic cell | 1.32e-14 | 177 |
neutrophil | 6.19e-13 | 3 |
naive T cell | 2.78e-12 | 3 |
granulocyte | 4.14e-12 | 8 |
hematopoietic oligopotent progenitor cell | 4.24e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-12 | 161 |
leukocyte | 8.63e-12 | 136 |
CD4-positive, alpha-beta T cell | 1.40e-10 | 6 |
T cell | 1.97e-10 | 25 |
pro-T cell | 1.97e-10 | 25 |
lymphoid lineage restricted progenitor cell | 3.65e-09 | 52 |
lymphocyte | 6.14e-09 | 53 |
common lymphoid progenitor | 6.14e-09 | 53 |
blood cell | 1.05e-08 | 11 |
regulatory T cell | 1.19e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.19e-08 | 2 |
naive regulatory T cell | 1.19e-08 | 2 |
CD8-positive, alpha-beta T cell | 5.66e-08 | 11 |
nongranular leukocyte | 7.46e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.08e-08 | 4 |
hemolymphoid system gland | 1.08e-08 | 4 |
thymic region | 1.08e-08 | 4 |
pharyngeal gland | 1.08e-08 | 4 |
thymus primordium | 1.08e-08 | 4 |
blood | 2.29e-08 | 15 |
haemolymphatic fluid | 2.29e-08 | 15 |
organism substance | 2.29e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.