FFCP PHASE1:Hg19::chr12:70861853..70861868,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000548687,ENST00000549460,uc001svz.2_5end|description=CAGE_peak_1_at_ENST00000548687_5end,CAGE_peak_1_at_ENST00000549460_5end,CAGE_peak_1_at_uc001svz.2_5end|id=chr12:70861853..70861868,+|ontology_enrichment_celltype=CL:0000945!7.27e-10!24;CL:0000826!7.27e-10!24|ontology_enrichment_celltype_v019=CL:0000945;9.46e-25;24!CL:0000054;6.67e-10;2!CL:0000137;6.67e-10;2!CL:0000092;6.67e-10;2!CL:0000236;1.63e-08;13!CL:0000542;9.23e-08;53|ontology_enrichment_celltype_v019_2=CL:0000945,4.60e-25,24;CL:0000826,4.60e-25,24;CL:0000838,3.26e-12,52;CL:0000542,6.24e-12,53;CL:0000051,6.24e-12,53;CL:0000054,5.84e-10,2;CL:0000137,5.84e-10,2;CL:0000092,5.84e-10,2;CL:0002087,9.19e-09,115;CL:0002031,3.05e-08,120;CL:0000236,5.89e-08,14;CL:0002032,8.27e-08,161;CL:0000837,8.27e-08,161;CL:0000037,2.67e-07,168;CL:0000738,7.75e-07,136|ontology_enrichment_development_v019=CL:0000051;9.23e-08;53|ontology_enrichment_disease=DOID:162!6.14e-18!235;DOID:14566!8.04e-18!239;DOID:0050687!5.10e-11!143;DOID:2531!1.51e-10!51;DOID:0060083!1.51e-10!51;DOID:0050686!1.25e-08!137;DOID:305!4.06e-08!106|ontology_enrichment_disease_v019=DOID:0060058;1.25e-11;10!DOID:200;6.67e-10;2!DOID:4305;6.67e-10;2!DOID:2531;6.30e-08;51!DOID:0060083;6.30e-08;51!DOID:201;3.12e-07;6!DOID:0060100;3.12e-07;6|ontology_enrichment_disease_v019_2=DOID:162,9.98e-17,235;DOID:14566,3.19e-16,239;DOID:2531,4.10e-15,51;DOID:0060083,4.10e-15,51;DOID:0060058,7.37e-12,10;DOID:200,5.84e-10,2;DOID:4305,5.84e-10,2;DOID:0050687,2.59e-09,143;DOID:0050686,4.88e-09,137;DOID:201,3.53e-07,6;DOID:0060100,3.53e-07,6|ontology_enrichment_uberon=UBERON:0000473!4.21e-07!8|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.14940825229924,1.33808328233255,0,0,0.154816123316076,0,0,0,1.93668001450754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,1.28019066769952,0.400395987036012,0,1.32208974556972,0,0,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0.280797178113459,4.56469358066384,0.156679895773023,0,0,0,0.80719882876419,3.40676990152261,0.343505344755765,2.45792611446766,1.3420566473545,2.50273712567863,0.586164286206121,0.278406173895242,0,0,0,0,1.12284324244932,0.146508179271894,0,3.90051844971174,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0.185536196323703,0,0,0,0,0,4.06805840468426,0,0,0.291604613383254,0,0,0,0,0,0,0,0.32681539055697,0,0,0.113942055847001,0,2.42345639906385,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0.202203398942031,0,0,2.73682183823499,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,1.8027707491708,0,0,1.21882889212564,0,0,0.967563312890852,2.0465008784132,0.903270027585302,0,0,0,1.23337732182076,1.78843150532691,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,0.709048640765013,0.576911008668165,1.01105315781277,0,1.43944664511834,0,0.136203406111576,0,0,0,0,0.77380195455795,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47305718976163,0,0,0,0.13223260174269,0,0.704815022316672,0.106787412567695,0,0,0,0,3.41019275466509,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0.74988244777264,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.194860308839388,0.265729680626726,0,0.655219697692825,1.2288645437686,0,0,0.960225567247268,2.41100971525142,1.13503190713367,0.736423801007363,0.559518030877778,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0,0,3.23887471053385,0,0,0,1.1441462864015,0,1.19349733269765,0,5.44603685499504,0,7.33338744547983,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,2.22934412268644,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0,0.999411559249289,0,2.47026410200984,0,0,0.917458566809082,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,1.63898357945543,0,2.95767606251747,1.06886962106224,0.459474497674225,0.752122617877125,0.454672189309436,0.535928260312357,0,0.310298987585686,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,1.0776328482334,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0|short_description=p1@ENST00000548687,p1@ENST00000549460,p1@uc001svz.2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000548687,ENST00000549460,uc001svz.2_5end | |||
|description=CAGE_peak_1_at_ENST00000548687_5end,CAGE_peak_1_at_ENST00000549460_5end,CAGE_peak_1_at_uc001svz.2_5end | |||
|id=chr12:70861853..70861868,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.27e-10!24;CL:0000826!7.27e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.46e-25;24!CL:0000054;6.67e-10;2!CL:0000137;6.67e-10;2!CL:0000092;6.67e-10;2!CL:0000236;1.63e-08;13!CL:0000542;9.23e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.60e-25,24;CL:0000826,4.60e-25,24;CL:0000838,3.26e-12,52;CL:0000542,6.24e-12,53;CL:0000051,6.24e-12,53;CL:0000054,5.84e-10,2;CL:0000137,5.84e-10,2;CL:0000092,5.84e-10,2;CL:0002087,9.19e-09,115;CL:0002031,3.05e-08,120;CL:0000236,5.89e-08,14;CL:0002032,8.27e-08,161;CL:0000837,8.27e-08,161;CL:0000037,2.67e-07,168;CL:0000738,7.75e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;9.23e-08;53 | |||
|ontology_enrichment_disease=DOID:162!6.14e-18!235;DOID:14566!8.04e-18!239;DOID:0050687!5.10e-11!143;DOID:2531!1.51e-10!51;DOID:0060083!1.51e-10!51;DOID:0050686!1.25e-08!137;DOID:305!4.06e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.25e-11;10!DOID:200;6.67e-10;2!DOID:4305;6.67e-10;2!DOID:2531;6.30e-08;51!DOID:0060083;6.30e-08;51!DOID:201;3.12e-07;6!DOID:0060100;3.12e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.98e-17,235;DOID:14566,3.19e-16,239;DOID:2531,4.10e-15,51;DOID:0060083,4.10e-15,51;DOID:0060058,7.37e-12,10;DOID:200,5.84e-10,2;DOID:4305,5.84e-10,2;DOID:0050687,2.59e-09,143;DOID:0050686,4.88e-09,137;DOID:201,3.53e-07,6;DOID:0060100,3.53e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.21e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.14940825229924,1.33808328233255,0,0,0.154816123316076,0,0,0,1.93668001450754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,1.28019066769952,0.400395987036012,0,1.32208974556972,0,0,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0.280797178113459,4.56469358066384,0.156679895773023,0,0,0,0.80719882876419,3.40676990152261,0.343505344755765,2.45792611446766,1.3420566473545,2.50273712567863,0.586164286206121,0.278406173895242,0,0,0,0,1.12284324244932,0.146508179271894,0,3.90051844971174,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0.185536196323703,0,0,0,0,0,4.06805840468426,0,0,0.291604613383254,0,0,0,0,0,0,0,0.32681539055697,0,0,0.113942055847001,0,2.42345639906385,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0.202203398942031,0,0,2.73682183823499,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,1.8027707491708,0,0,1.21882889212564,0,0,0.967563312890852,2.0465008784132,0.903270027585302,0,0,0,1.23337732182076,1.78843150532691,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,0.709048640765013,0.576911008668165,1.01105315781277,0,1.43944664511834,0,0.136203406111576,0,0,0,0,0.77380195455795,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47305718976163,0,0,0,0.13223260174269,0,0.704815022316672,0.106787412567695,0,0,0,0,3.41019275466509,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0.74988244777264,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.194860308839388,0.265729680626726,0,0.655219697692825,1.2288645437686,0,0,0.960225567247268,2.41100971525142,1.13503190713367,0.736423801007363,0.559518030877778,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0,0,3.23887471053385,0,0,0,1.1441462864015,0,1.19349733269765,0,5.44603685499504,0,7.33338744547983,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,2.22934412268644,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0,0.999411559249289,0,2.47026410200984,0,0,0.917458566809082,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,1.63898357945543,0,2.95767606251747,1.06886962106224,0.459474497674225,0.752122617877125,0.454672189309436,0.535928260312357,0,0.310298987585686,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,1.0776328482334,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p1@ENST00000548687,p1@ENST00000549460,p1@uc001svz.2 | |||
}} |
Revision as of 00:18, 11 September 2013
Short description: | p1@ENST00000548687, p1@ENST00000549460, p1@uc001svz.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000548687_5end, CAGE_peak_1_at_ENST00000549460_5end, CAGE_peak_1_at_uc001svz.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000548687, ENST00000549460, uc001svz.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.60e-25 | 24 |
pro-B cell | 4.60e-25 | 24 |
lymphoid lineage restricted progenitor cell | 3.26e-12 | 52 |
lymphocyte | 6.24e-12 | 53 |
common lymphoid progenitor | 6.24e-12 | 53 |
bone matrix secreting cell | 5.84e-10 | 2 |
osteocyte | 5.84e-10 | 2 |
osteoclast | 5.84e-10 | 2 |
nongranular leukocyte | 9.19e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.05e-08 | 120 |
B cell | 5.89e-08 | 14 |
hematopoietic oligopotent progenitor cell | 8.27e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.27e-08 | 161 |
hematopoietic stem cell | 2.67e-07 | 168 |
leukocyte | 7.75e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.98e-17 | 235 |
disease of cellular proliferation | 3.19e-16 | 239 |
hematologic cancer | 4.10e-15 | 51 |
immune system cancer | 4.10e-15 | 51 |
lymphoma | 7.37e-12 | 10 |
giant cell tumor | 5.84e-10 | 2 |
bone giant cell tumor | 5.84e-10 | 2 |
cell type cancer | 2.59e-09 | 143 |
organ system cancer | 4.88e-09 | 137 |
connective tissue cancer | 3.53e-07 | 6 |
musculoskeletal system cancer | 3.53e-07 | 6 |
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