FFCP PHASE1:Hg19::chr14:106174884..106174895,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=80bp_to_BC113815_5end|coexpression_cluster_id=C394|description=CAGE_peak_5_at_BC113815_5end|id=chr14:106174884..106174895,-|ontology_enrichment_celltype=CL:0000236!7.69e-15!14;CL:0000945!2.98e-08!24;CL:0000826!2.98e-08!24|ontology_enrichment_celltype_v019=CL:0000236;6.77e-13;13!CL:0000945;4.46e-07;24|ontology_enrichment_celltype_v019_2=CL:0000236,5.58e-12,14;CL:0000945,4.54e-07,24;CL:0000826,4.54e-07,24|ontology_enrichment_development_v019=UBERON:0006298;2.63e-12;1!UBERON:0001045;3.64e-12;1!UBERON:0006242;5.62e-12;1!UBERON:0009143;1.25e-11;1!UBERON:0008801;1.25e-11;1!UBERON:0005754;1.25e-11;1!UBERON:0006595;3.06e-08;86|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.18e-30!115;UBERON:0001829!1.68e-10!2|ontology_enrichment_uberon_v019=UBERON:0001829;3.72e-22;2!UBERON:0004921;7.53e-13;33!UBERON:0001736;2.63e-12;1!UBERON:0001154;3.64e-12;1!UBERON:0001153;3.64e-12;1!UBERON:0009854;3.64e-12;1!UBERON:0002372;5.62e-12;1!UBERON:0002171;5.62e-12;1!UBERON:0001961;5.62e-12;1!UBERON:0001744;5.62e-12;1!UBERON:0006518;5.62e-12;1!UBERON:0008949;5.62e-12;1!UBERON:0000101;5.62e-12;1!UBERON:0001042;5.62e-12;1!UBERON:0002167;5.62e-12;1!UBERON:0001735;5.62e-12;1!UBERON:0001831;1.25e-11;1!UBERON:0000998;1.25e-11;1!UBERON:0006868;1.25e-11;1!UBERON:0001567;1.25e-11;1!UBERON:0001044;5.26e-08;6!UBERON:0003293;5.26e-08;6!UBERON:0003294;5.26e-08;6!UBERON:0010047;5.26e-08;6!UBERON:0003408;5.26e-08;6!UBERON:0000167;5.26e-08;6!UBERON:0001041;2.62e-07;14!UBERON:0001555;7.76e-07;54!UBERON:0000341;9.43e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.17e-22,2;UBERON:0007023,4.02e-16,114;UBERON:0001736,2.63e-12,1;UBERON:0006298,2.63e-12,1;UBERON:0001154,3.65e-12,1;UBERON:0001153,3.65e-12,1;UBERON:0001045,3.65e-12,1;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0002171,7.76e-12,1;UBERON:0006518,7.76e-12,1;UBERON:0008949,7.76e-12,1;UBERON:0000101,7.76e-12,1;UBERON:0002167,7.76e-12,1;UBERON:0001831,1.07e-11,1;UBERON:0001567,1.07e-11,1;UBERON:0008801,1.07e-11,1;UBERON:0000998,1.32e-11,1;UBERON:0006868,1.32e-11,1;UBERON:0001044,4.99e-08,6;UBERON:0003293,4.99e-08,6;UBERON:0003294,4.99e-08,6;UBERON:0010047,4.99e-08,6;UBERON:0000167,4.99e-08,6;UBERON:0004921,1.64e-07,118;UBERON:0001007,3.51e-07,145;UBERON:0001555,3.51e-07,145;UBERON:0007026,3.51e-07,145;UBERON:0005409,7.90e-07,25;UBERON:0000341,9.44e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0,0,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,3.59169090190492,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56526937059684,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06687918137261,0,0,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.961086713109252,0,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70762364458462,0,0,0,0,0,0,0,0,2.91350145737546,0,0,0,0,0,0,6.88093925106811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=80bp_to_BC113815_5end | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_5_at_BC113815_5end | |||
|id=chr14:106174884..106174895,- | |||
|ontology_enrichment_celltype=CL:0000236!7.69e-15!14;CL:0000945!2.98e-08!24;CL:0000826!2.98e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.77e-13;13!CL:0000945;4.46e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.58e-12,14;CL:0000945,4.54e-07,24;CL:0000826,4.54e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.63e-12;1!UBERON:0001045;3.64e-12;1!UBERON:0006242;5.62e-12;1!UBERON:0009143;1.25e-11;1!UBERON:0008801;1.25e-11;1!UBERON:0005754;1.25e-11;1!UBERON:0006595;3.06e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-30!115;UBERON:0001829!1.68e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.72e-22;2!UBERON:0004921;7.53e-13;33!UBERON:0001736;2.63e-12;1!UBERON:0001154;3.64e-12;1!UBERON:0001153;3.64e-12;1!UBERON:0009854;3.64e-12;1!UBERON:0002372;5.62e-12;1!UBERON:0002171;5.62e-12;1!UBERON:0001961;5.62e-12;1!UBERON:0001744;5.62e-12;1!UBERON:0006518;5.62e-12;1!UBERON:0008949;5.62e-12;1!UBERON:0000101;5.62e-12;1!UBERON:0001042;5.62e-12;1!UBERON:0002167;5.62e-12;1!UBERON:0001735;5.62e-12;1!UBERON:0001831;1.25e-11;1!UBERON:0000998;1.25e-11;1!UBERON:0006868;1.25e-11;1!UBERON:0001567;1.25e-11;1!UBERON:0001044;5.26e-08;6!UBERON:0003293;5.26e-08;6!UBERON:0003294;5.26e-08;6!UBERON:0010047;5.26e-08;6!UBERON:0003408;5.26e-08;6!UBERON:0000167;5.26e-08;6!UBERON:0001041;2.62e-07;14!UBERON:0001555;7.76e-07;54!UBERON:0000341;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.17e-22,2;UBERON:0007023,4.02e-16,114;UBERON:0001736,2.63e-12,1;UBERON:0006298,2.63e-12,1;UBERON:0001154,3.65e-12,1;UBERON:0001153,3.65e-12,1;UBERON:0001045,3.65e-12,1;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0002171,7.76e-12,1;UBERON:0006518,7.76e-12,1;UBERON:0008949,7.76e-12,1;UBERON:0000101,7.76e-12,1;UBERON:0002167,7.76e-12,1;UBERON:0001831,1.07e-11,1;UBERON:0001567,1.07e-11,1;UBERON:0008801,1.07e-11,1;UBERON:0000998,1.32e-11,1;UBERON:0006868,1.32e-11,1;UBERON:0001044,4.99e-08,6;UBERON:0003293,4.99e-08,6;UBERON:0003294,4.99e-08,6;UBERON:0010047,4.99e-08,6;UBERON:0000167,4.99e-08,6;UBERON:0004921,1.64e-07,118;UBERON:0001007,3.51e-07,145;UBERON:0001555,3.51e-07,145;UBERON:0007026,3.51e-07,145;UBERON:0005409,7.90e-07,25;UBERON:0000341,9.44e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0,0,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,3.59169090190492,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56526937059684,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06687918137261,0,0,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.961086713109252,0,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70762364458462,0,0,0,0,0,0,0,0,2.91350145737546,0,0,0,0,0,0,6.88093925106811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,5.11761556562354,0,0.0645889098360061,0,0,0,0,0.435433495793923,0,2.49202596153974,2.86888821570705,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p5@BC113815 | |||
}} |
Revision as of 03:34, 11 September 2013
Short description: | p5@BC113815 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BC113815_5end |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | 80bp_to_BC113815_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.58e-12 | 14 |
lymphocyte of B lineage | 4.54e-07 | 24 |
pro-B cell | 4.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.17e-22 | 2 |
adult organism | 4.02e-16 | 114 |
submandibular gland | 2.63e-12 | 1 |
submandibular gland primordium | 2.63e-12 | 1 |
vermiform appendix | 3.65e-12 | 1 |
caecum | 3.65e-12 | 1 |
midgut | 3.65e-12 | 1 |
tonsil | 6.26e-12 | 1 |
mucosa-associated lymphoid tissue | 6.26e-12 | 1 |
lymphoid tissue | 6.26e-12 | 1 |
tonsillar ring | 6.26e-12 | 1 |
lower lobe of right lung | 7.76e-12 | 1 |
right lung lobe | 7.76e-12 | 1 |
lower lobe of lung | 7.76e-12 | 1 |
lobe of lung | 7.76e-12 | 1 |
right lung | 7.76e-12 | 1 |
parotid gland | 1.07e-11 | 1 |
cheek | 1.07e-11 | 1 |
parotid gland primordium | 1.07e-11 | 1 |
seminal vesicle | 1.32e-11 | 1 |
seminal fluid secreting gland | 1.32e-11 | 1 |
saliva-secreting gland | 4.99e-08 | 6 |
gland of oral region | 4.99e-08 | 6 |
gland of foregut | 4.99e-08 | 6 |
oral gland | 4.99e-08 | 6 |
oral cavity | 4.99e-08 | 6 |
subdivision of digestive tract | 1.64e-07 | 118 |
digestive system | 3.51e-07 | 145 |
digestive tract | 3.51e-07 | 145 |
primitive gut | 3.51e-07 | 145 |
gastrointestinal system | 7.90e-07 | 25 |
throat | 9.44e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.