FFCP PHASE1:Hg19::chr14:33202467..33202483,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9472|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=376|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000556540_5end|coexpression_cluster_id=C11|description=CAGE_peak_20_at_AKAP6_5end|id=chr14:33202467..33202483,+|ontology_enrichment_celltype=CL:0002605!8.25e-20!3;CL:0000128!8.77e-09!7;CL:0000126!8.77e-09!7;CL:0000127!8.77e-09!7;CL:0002453!8.77e-09!7;CL:0002319!4.57e-08!25;CL:0000047!7.34e-08!8|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6!CL:0002319;7.45e-07;25|ontology_enrichment_celltype_v019_2=CL:0000047,9.92e-21,8;CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6;CL:0002319,7.24e-07,25|ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3!CL:0000031;6.78e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.43e-35!57;UBERON:0005068!2.43e-35!57;UBERON:0006241!2.43e-35!57;UBERON:0007135!2.43e-35!57;UBERON:0001017!4.69e-32!82;UBERON:0005743!2.13e-30!86;UBERON:0000073!3.63e-27!94;UBERON:0001016!3.63e-27!94;UBERON:0002616!7.30e-27!59;UBERON:0003075!2.91e-22!86;UBERON:0007284!2.91e-22!86;UBERON:0000955!3.68e-22!69;UBERON:0006238!3.68e-22!69;UBERON:0002346!4.12e-21!90;UBERON:0003076!3.13e-20!15;UBERON:0003057!3.13e-20!15;UBERON:0002020!1.39e-19!34;UBERON:0003528!1.39e-19!34;UBERON:0001893!1.59e-19!34;UBERON:0002780!4.13e-19!41;UBERON:0001890!4.13e-19!41;UBERON:0006240!4.13e-19!41;UBERON:0003080!1.30e-18!42;UBERON:0002680!6.65e-18!9;UBERON:0001895!6.65e-18!9;UBERON:0010092!6.65e-18!9;UBERON:0001869!3.87e-17!32;UBERON:0002791!1.08e-16!33;UBERON:0004121!7.72e-15!169;UBERON:0000924!2.14e-14!173;UBERON:0006601!2.14e-14!173;UBERON:0000956!2.90e-14!25;UBERON:0000203!2.90e-14!25;UBERON:0004733!2.23e-13!12;UBERON:0002028!2.23e-13!12;UBERON:0007277!2.23e-13!12;UBERON:0000033!1.36e-12!123;UBERON:0004732!2.48e-12!13;UBERON:0003056!3.24e-12!61;UBERON:0000153!7.57e-12!129;UBERON:0007811!7.57e-12!129;UBERON:0002037!1.31e-10!6;UBERON:0006215!1.31e-10!6;UBERON:0000025!5.58e-10!194;UBERON:0000200!1.47e-09!6;UBERON:0002240!1.97e-09!3;UBERON:0006331!2.87e-09!3;UBERON:0000988!2.99e-09!3;UBERON:0004111!4.05e-09!241;UBERON:0007023!7.39e-08!115;UBERON:0002038!1.15e-07!1;UBERON:0009661!1.15e-07!1;UBERON:0002298!1.40e-07!8;UBERON:0007190!2.80e-07!1;UBERON:0002581!2.98e-07!1;UBERON:0002022!3.17e-07!1;UBERON:0001950!3.37e-07!20;UBERON:0000477!5.69e-07!286;UBERON:0002308!8.21e-07!9;UBERON:0000125!8.21e-07!9|ontology_enrichment_uberon_v019=UBERON:0002037;9.96e-60;6!UBERON:0002680;3.32e-40;9!UBERON:0001895;3.32e-40;9!UBERON:0004733;2.00e-30;12!UBERON:0002028;2.00e-30;12!UBERON:0004732;3.65e-28;13|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-59,6;UBERON:0006215,1.22e-59,6;UBERON:0002680,3.80e-40,9;UBERON:0001895,3.80e-40,9;UBERON:0010092,3.80e-40,9;UBERON:0004733,2.22e-30,12;UBERON:0002028,2.22e-30,12;UBERON:0007277,2.22e-30,12;UBERON:0004732,4.00e-28,13;UBERON:0003076,1.65e-24,15;UBERON:0003057,1.65e-24,15;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0001049,4.68e-07,56;UBERON:0005068,4.68e-07,56;UBERON:0006241,4.68e-07,56;UBERON:0007135,4.68e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,3.75969483766164,1.18219047581419,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=376 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000556540_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_20_at_AKAP6_5end | |||
|id=chr14:33202467..33202483,+ | |||
|ontology_enrichment_celltype=CL:0002605!8.25e-20!3;CL:0000128!8.77e-09!7;CL:0000126!8.77e-09!7;CL:0000127!8.77e-09!7;CL:0002453!8.77e-09!7;CL:0002319!4.57e-08!25;CL:0000047!7.34e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6!CL:0002319;7.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.92e-21,8;CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3!CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-35!57;UBERON:0005068!2.43e-35!57;UBERON:0006241!2.43e-35!57;UBERON:0007135!2.43e-35!57;UBERON:0001017!4.69e-32!82;UBERON:0005743!2.13e-30!86;UBERON:0000073!3.63e-27!94;UBERON:0001016!3.63e-27!94;UBERON:0002616!7.30e-27!59;UBERON:0003075!2.91e-22!86;UBERON:0007284!2.91e-22!86;UBERON:0000955!3.68e-22!69;UBERON:0006238!3.68e-22!69;UBERON:0002346!4.12e-21!90;UBERON:0003076!3.13e-20!15;UBERON:0003057!3.13e-20!15;UBERON:0002020!1.39e-19!34;UBERON:0003528!1.39e-19!34;UBERON:0001893!1.59e-19!34;UBERON:0002780!4.13e-19!41;UBERON:0001890!4.13e-19!41;UBERON:0006240!4.13e-19!41;UBERON:0003080!1.30e-18!42;UBERON:0002680!6.65e-18!9;UBERON:0001895!6.65e-18!9;UBERON:0010092!6.65e-18!9;UBERON:0001869!3.87e-17!32;UBERON:0002791!1.08e-16!33;UBERON:0004121!7.72e-15!169;UBERON:0000924!2.14e-14!173;UBERON:0006601!2.14e-14!173;UBERON:0000956!2.90e-14!25;UBERON:0000203!2.90e-14!25;UBERON:0004733!2.23e-13!12;UBERON:0002028!2.23e-13!12;UBERON:0007277!2.23e-13!12;UBERON:0000033!1.36e-12!123;UBERON:0004732!2.48e-12!13;UBERON:0003056!3.24e-12!61;UBERON:0000153!7.57e-12!129;UBERON:0007811!7.57e-12!129;UBERON:0002037!1.31e-10!6;UBERON:0006215!1.31e-10!6;UBERON:0000025!5.58e-10!194;UBERON:0000200!1.47e-09!6;UBERON:0002240!1.97e-09!3;UBERON:0006331!2.87e-09!3;UBERON:0000988!2.99e-09!3;UBERON:0004111!4.05e-09!241;UBERON:0007023!7.39e-08!115;UBERON:0002038!1.15e-07!1;UBERON:0009661!1.15e-07!1;UBERON:0002298!1.40e-07!8;UBERON:0007190!2.80e-07!1;UBERON:0002581!2.98e-07!1;UBERON:0002022!3.17e-07!1;UBERON:0001950!3.37e-07!20;UBERON:0000477!5.69e-07!286;UBERON:0002308!8.21e-07!9;UBERON:0000125!8.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.96e-60;6!UBERON:0002680;3.32e-40;9!UBERON:0001895;3.32e-40;9!UBERON:0004733;2.00e-30;12!UBERON:0002028;2.00e-30;12!UBERON:0004732;3.65e-28;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-59,6;UBERON:0006215,1.22e-59,6;UBERON:0002680,3.80e-40,9;UBERON:0001895,3.80e-40,9;UBERON:0010092,3.80e-40,9;UBERON:0004733,2.22e-30,12;UBERON:0002028,2.22e-30,12;UBERON:0007277,2.22e-30,12;UBERON:0004732,4.00e-28,13;UBERON:0003076,1.65e-24,15;UBERON:0003057,1.65e-24,15;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0001049,4.68e-07,56;UBERON:0005068,4.68e-07,56;UBERON:0006241,4.68e-07,56;UBERON:0007135,4.68e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,3.75969483766164,1.18219047581419,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@AKAP6 | |||
}} |
Revision as of 04:19, 11 September 2013
Short description: | p20@AKAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_AKAP6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000556540_5end |
EntrezGene: | AKAP6 |
HGNC: | 376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.92e-21 | 8 |
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
regional part of metencephalon | 3.80e-40 | 9 |
metencephalon | 3.80e-40 | 9 |
future metencephalon | 3.80e-40 | 9 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
posterior neural tube | 1.65e-24 | 15 |
chordal neural plate | 1.65e-24 | 15 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |
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