UBERON:0001049
From FANTOM5_SSTAR
| Name: | neural tube | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted]." [Wikipedia:Neural_tube] | |
| Xrefs: |
| |
| Synonyms: |
"presumptive central nervous system" RELATED [] "tubus neuralis" RELATED LATIN [Wikipedia:Neural_tube] | |
| Comments: | The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium[GO:0021915] | |
| Alt_id: | UBERON:FBbt_00005554-MIAA_0000069-ZFA_0001135 | |
| Subset: |
uberon_slim vertebrate_core |
Gray19_with_color.png]
200px-Gray19_with_color.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003914(epithelial tube),UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0010371(ecto-epithelium),UBERON:0016879(future central nervous system) |
|---|---|
| develops_from: | UBERON:0005068(neural rod) |
| part_of: | UBERON:0000922(embryo),UBERON:0001016(nervous system) |
Children
| part of: | UBERON:0003076 (posterior neural tube),UBERON:0003080 (anterior neural tube),UBERON:0004061 (neural tube mantle layer) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001049 (neural tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Hollow epithelial tube on dorsal side of the embryo that develops into the central nervous system.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
