UBERON:0004061
From FANTOM5_SSTAR
Name: | neural tube mantle layer | ||
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Namespace: | FANTOM | ||
Definition: | "the layer of glia and differentiating neurons that will form the gray matter of the spinal cord; this lies between the ventricular and marginal layers and includes the basal and alar plates" [MP:0009690] | ||
Xrefs: |
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Synonyms: | "neural tube intermediate zone" EXACT [MP:0009690] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000119(cell layer),UBERON:0004121(ectoderm-derived structure),UBERON:0005291(embryonic tissue) |
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part_of: | UBERON:0000922(embryo),UBERON:0001049(neural tube) |
Children
part of: | UBERON:0005882 (neural tube alar plate) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004061 (neural tube mantle layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data