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UBERON:0004061

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Name:neural tube mantle layer
Namespace:FANTOM
Definition:"the layer of glia and differentiating neurons that will form the gray matter of the spinal cord; this lies between the ventricular and marginal layers and includes the basal and alar plates" [MP:0009690]
Xrefs:
links:
EMAPA:17148
Synonyms: "neural tube intermediate zone" EXACT [MP:0009690]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000119(cell layer),UBERON:0004121(ectoderm-derived structure),UBERON:0005291(embryonic tissue)
part_of:UBERON:0000922(embryo),UBERON:0001049(neural tube)



Children

part of:UBERON:0005882 (neural tube alar plate)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004061 (neural tube mantle layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data