FFCP PHASE1:Hg19::chr14:61789529..61789551,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000500036,uc001xfm.2_5end|coexpression_cluster_id=C18|description=CAGE_peak_1_at_ENST00000500036_5end,CAGE_peak_1_at_uc001xfm.2_5end|id=chr14:61789529..61789551,-|ontology_enrichment_celltype=CL:0000791!1.54e-15!18;CL:0000789!1.54e-15!18;CL:0002420!1.54e-15!18;CL:0002419!1.54e-15!18;CL:0000790!1.54e-15!18;CL:0000084!1.14e-13!25;CL:0000827!1.14e-13!25;CL:0002139!1.80e-11!24;CL:0000625!5.35e-10!11;CL:0000115!5.66e-10!35;CL:0000071!2.98e-08!18;CL:0002546!2.98e-08!18;CL:0000838!1.12e-07!52;CL:0000542!2.58e-07!53;CL:0000051!2.58e-07!53;CL:0000076!8.33e-07!62|ontology_enrichment_celltype_v019=CL:0000791;1.90e-22;18!CL:0000789;1.90e-22;18!CL:0002419;1.90e-22;18!CL:0000084;1.24e-19;25!CL:0002139;4.98e-15;24!CL:0000625;3.93e-14;11!CL:0000115;4.45e-12;36!CL:0000071;1.14e-11;18!CL:0000624;4.95e-09;6!CL:0002078;7.96e-07;45!CL:1000413;8.44e-07;9|ontology_enrichment_celltype_v019_2=CL:0000791,1.95e-22,18;CL:0000789,1.95e-22,18;CL:0002420,1.95e-22,18;CL:0002419,1.95e-22,18;CL:0000790,1.95e-22,18;CL:0000084,8.77e-20,25;CL:0000827,8.77e-20,25;CL:0002139,1.12e-15,24;CL:0000115,6.28e-15,36;CL:0000625,3.73e-14,11;CL:0000071,3.44e-12,18;CL:0002546,3.44e-12,18;CL:0002078,2.67e-10,45;CL:0000838,6.75e-10,52;CL:0000542,1.49e-09,53;CL:0000051,1.49e-09,53;CL:0000624,5.31e-09,6;CL:0000076,7.02e-08,63;CL:1000413,3.74e-07,9|ontology_enrichment_development_v019=CL:0000790;1.90e-22;18!CL:0002546;1.14e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.07e-12!115;UBERON:0001004!5.20e-10!72;UBERON:0001986!2.98e-08!18;UBERON:0004638!2.98e-08!18;UBERON:0004852!2.98e-08!18;UBERON:0000974!2.44e-07!10;UBERON:0000487!2.46e-07!22;UBERON:0001557!2.57e-07!19;UBERON:0000065!3.60e-07!53;UBERON:0004119!9.27e-07!169;UBERON:0000925!9.27e-07!169;UBERON:0006595!9.27e-07!169|ontology_enrichment_uberon_v019=UBERON:0004638;1.14e-11;18!UBERON:0001986;1.14e-11;18!UBERON:0004852;1.14e-11;18!UBERON:0000487;4.48e-10;22!UBERON:0000178;2.01e-09;15!UBERON:0000179;2.01e-09;15!UBERON:0000463;2.01e-09;15!UBERON:0006914;2.71e-08;25!UBERON:0003915;8.44e-07;9!UBERON:0004700;8.44e-07;9!UBERON:0001917;8.44e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.44e-12,18;UBERON:0001986,3.44e-12,18;UBERON:0004852,3.44e-12,18;UBERON:0000487,1.55e-10,22;UBERON:0000178,1.41e-09,15;UBERON:0000179,1.41e-09,15;UBERON:0000463,1.41e-09,15;UBERON:0000974,6.19e-09,10;UBERON:0006914,1.11e-08,25;UBERON:0003915,3.74e-07,9;UBERON:0004700,3.74e-07,9;UBERON:0001917,3.74e-07,9;UBERON:0001557,5.70e-07,19;UBERON:0003408,7.17e-07,10|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,1.23150884174919,0.708397031823113,0.786728553697808,2.68680578668049,0.928896739896456,0,0.30120591877825,0.369754010166788,0,0,1.76160263600908,1.10799081706375,1.20326668482085,2.82114131930607,0,1.29557466407592,0.257575567634187,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,1.29096936716765,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,1.21079900526674,0.736555271975129,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,0.263384084775077,15.1466522987651,14.9344089844683,12.3360899399706,2.50779743086017,12.71096839871,8.04861269749047,3.89653456815823,3.89936599098108,6.18672405697158,8.19675409959398,5.68688113906533,3.71464827204458,2.9913649938772,6.24864037493969,4.42160028457357,9.56350182925673,14.680369753044,15.2498272011136,18.8163942848958,6.34532319106371,10.3469533272519,15.4632350467183,8.6026695286631,4.45991580053735,6.51083453856419,8.55406840003537,7.82990619204418,9.08704939196371,4.99722906209383,7.34009481336452,7.39015197228942,6.45141578319144,8.29064606928873,9.55841065626473,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,1.09288586487763,1.48313777113772,0,0.174129737299267,0,0.476981248610684,1.14398982156026,0.74291500265913,4.17401055470081,0,1.73570250803797,1.69592382577203,2.93649605346934,2.20094433552054,1.8809546988313,3.35941786920128,4.62496141492723,5.02080919147005,2.81980521976403,2.28081631715554,1.46437234528902,5.51494620518803,4.86085168729056,4.28638695763583,2.2452937262617,1.46394924628319,0,2.84779697870439,1.83201743930407,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,1.65629520055781,1.01150814046861,1.20505514941741,1.21323370005633,1.08939722046203,1.18635309555548,1.21348177344148,0.98110732562673,1.92373578473195,2.21446636387394,0,0,0,0,0,0.590789906681404,3.09024169590255,0.983907508344908,0,0.98775256867763,1.12401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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000500036,uc001xfm.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_ENST00000500036_5end,CAGE_peak_1_at_uc001xfm.2_5end | |||
|id=chr14:61789529..61789551,- | |||
|ontology_enrichment_celltype=CL:0000791!1.54e-15!18;CL:0000789!1.54e-15!18;CL:0002420!1.54e-15!18;CL:0002419!1.54e-15!18;CL:0000790!1.54e-15!18;CL:0000084!1.14e-13!25;CL:0000827!1.14e-13!25;CL:0002139!1.80e-11!24;CL:0000625!5.35e-10!11;CL:0000115!5.66e-10!35;CL:0000071!2.98e-08!18;CL:0002546!2.98e-08!18;CL:0000838!1.12e-07!52;CL:0000542!2.58e-07!53;CL:0000051!2.58e-07!53;CL:0000076!8.33e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.90e-22;18!CL:0000789;1.90e-22;18!CL:0002419;1.90e-22;18!CL:0000084;1.24e-19;25!CL:0002139;4.98e-15;24!CL:0000625;3.93e-14;11!CL:0000115;4.45e-12;36!CL:0000071;1.14e-11;18!CL:0000624;4.95e-09;6!CL:0002078;7.96e-07;45!CL:1000413;8.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.95e-22,18;CL:0000789,1.95e-22,18;CL:0002420,1.95e-22,18;CL:0002419,1.95e-22,18;CL:0000790,1.95e-22,18;CL:0000084,8.77e-20,25;CL:0000827,8.77e-20,25;CL:0002139,1.12e-15,24;CL:0000115,6.28e-15,36;CL:0000625,3.73e-14,11;CL:0000071,3.44e-12,18;CL:0002546,3.44e-12,18;CL:0002078,2.67e-10,45;CL:0000838,6.75e-10,52;CL:0000542,1.49e-09,53;CL:0000051,1.49e-09,53;CL:0000624,5.31e-09,6;CL:0000076,7.02e-08,63;CL:1000413,3.74e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.90e-22;18!CL:0002546;1.14e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.07e-12!115;UBERON:0001004!5.20e-10!72;UBERON:0001986!2.98e-08!18;UBERON:0004638!2.98e-08!18;UBERON:0004852!2.98e-08!18;UBERON:0000974!2.44e-07!10;UBERON:0000487!2.46e-07!22;UBERON:0001557!2.57e-07!19;UBERON:0000065!3.60e-07!53;UBERON:0004119!9.27e-07!169;UBERON:0000925!9.27e-07!169;UBERON:0006595!9.27e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.14e-11;18!UBERON:0001986;1.14e-11;18!UBERON:0004852;1.14e-11;18!UBERON:0000487;4.48e-10;22!UBERON:0000178;2.01e-09;15!UBERON:0000179;2.01e-09;15!UBERON:0000463;2.01e-09;15!UBERON:0006914;2.71e-08;25!UBERON:0003915;8.44e-07;9!UBERON:0004700;8.44e-07;9!UBERON:0001917;8.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.44e-12,18;UBERON:0001986,3.44e-12,18;UBERON:0004852,3.44e-12,18;UBERON:0000487,1.55e-10,22;UBERON:0000178,1.41e-09,15;UBERON:0000179,1.41e-09,15;UBERON:0000463,1.41e-09,15;UBERON:0000974,6.19e-09,10;UBERON:0006914,1.11e-08,25;UBERON:0003915,3.74e-07,9;UBERON:0004700,3.74e-07,9;UBERON:0001917,3.74e-07,9;UBERON:0001557,5.70e-07,19;UBERON:0003408,7.17e-07,10 | |||
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| |||
|short_description=p1@ENST00000500036,p1@uc001xfm.2 | |||
}} |
Revision as of 05:00, 11 September 2013
Short description: | p1@ENST00000500036, p1@uc001xfm.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000500036_5end, CAGE_peak_1_at_uc001xfm.2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000500036, uc001xfm.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.95e-22 | 18 |
alpha-beta T cell | 1.95e-22 | 18 |
immature T cell | 1.95e-22 | 18 |
mature T cell | 1.95e-22 | 18 |
immature alpha-beta T cell | 1.95e-22 | 18 |
T cell | 8.77e-20 | 25 |
pro-T cell | 8.77e-20 | 25 |
endothelial cell of vascular tree | 1.12e-15 | 24 |
endothelial cell | 6.28e-15 | 36 |
CD8-positive, alpha-beta T cell | 3.73e-14 | 11 |
blood vessel endothelial cell | 3.44e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.44e-12 | 18 |
meso-epithelial cell | 2.67e-10 | 45 |
lymphoid lineage restricted progenitor cell | 6.75e-10 | 52 |
lymphocyte | 1.49e-09 | 53 |
common lymphoid progenitor | 1.49e-09 | 53 |
CD4-positive, alpha-beta T cell | 5.31e-09 | 6 |
squamous epithelial cell | 7.02e-08 | 63 |
endothelial cell of artery | 3.74e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.44e-12 | 18 |
endothelium | 3.44e-12 | 18 |
cardiovascular system endothelium | 3.44e-12 | 18 |
simple squamous epithelium | 1.55e-10 | 22 |
blood | 1.41e-09 | 15 |
haemolymphatic fluid | 1.41e-09 | 15 |
organism substance | 1.41e-09 | 15 |
neck | 6.19e-09 | 10 |
squamous epithelium | 1.11e-08 | 25 |
endothelial tube | 3.74e-07 | 9 |
arterial system endothelium | 3.74e-07 | 9 |
endothelium of artery | 3.74e-07 | 9 |
upper respiratory tract | 5.70e-07 | 19 |
gland of gut | 7.17e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.