FFCP PHASE1:Hg19::chr15:37391588..37391604,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4212|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7001|TSSclassifier=S|UniProt=B3KPQ6|association_with_transcript=0bp_to_ENST00000397620,ENST00000557796,NM_172316,uc001zjm.2_5end|description=CAGE_peak_11_at_MEIS2_5end|id=chr15:37391588..37391604,-|ontology_enrichment_celltype=CL:0000055!2.59e-16!180;CL:0000057!6.40e-10!75;CL:0002620!9.67e-09!23;CL:0000183!9.92e-08!59;CL:0000187!2.58e-07!54;CL:0000220!3.42e-07!246;CL:0000222!3.51e-07!119;CL:0000680!4.43e-07!57;CL:0000056!4.43e-07!57;CL:0000355!4.43e-07!57;CL:0002321!8.11e-07!248;CL:0000393!9.81e-07!60;CL:0000211!9.81e-07!60|ontology_enrichment_celltype_v019=CL:0002620;1.12e-08;23|ontology_enrichment_celltype_v019_2=CL:0000057,5.05e-10,76;CL:0000222,6.89e-09,121;CL:0002620,9.24e-09,23;CL:0000187,6.19e-08,55;CL:0000393,1.25e-07,61;CL:0000211,1.25e-07,61;CL:0000680,4.11e-07,58;CL:0000056,4.11e-07,58;CL:0000355,4.11e-07,58;CL:0000192,8.05e-07,43;CL:0000514,8.05e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;8.62e-07;5!DOID:450;8.62e-07;5!DOID:66;8.62e-07;5!DOID:423;8.62e-07;5!DOID:0080000;8.62e-07;5!DOID:11722;8.62e-07;5|ontology_enrichment_disease_v019_2=DOID:17,8.20e-07,5;DOID:450,8.20e-07,5;DOID:66,8.20e-07,5;DOID:423,8.20e-07,5;DOID:0080000,8.20e-07,5;DOID:11722,8.20e-07,5|ontology_enrichment_uberon=UBERON:0000475!8.19e-15!365;UBERON:0000468!4.32e-14!659;UBERON:0000467!1.25e-12!625;UBERON:0000480!1.26e-12!626;UBERON:0000481!9.23e-12!347;UBERON:0000483!6.57e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002100!3.89e-08!216;UBERON:0003104!6.49e-08!238;UBERON:0009142!6.49e-08!238;UBERON:0000062!6.98e-08!511;UBERON:0004111!1.03e-07!241;UBERON:0000922!1.49e-07!612;UBERON:0005256!1.77e-07!143;UBERON:0002050!1.93e-07!605;UBERON:0005423!1.93e-07!605;UBERON:0000923!3.61e-07!604;UBERON:0005291!3.61e-07!604;UBERON:0006598!3.61e-07!604;UBERON:0002532!3.61e-07!604;UBERON:0005156!6.11e-07!59;UBERON:0000990!6.11e-07!59;UBERON:0002385!8.89e-07!63;UBERON:0001015!8.89e-07!63;UBERON:0000383!8.89e-07!63|ontology_enrichment_uberon_v019=UBERON:0001135;6.88e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.20e-08,78;UBERON:0002385,3.78e-07,64;UBERON:0001015,3.78e-07,64;UBERON:0000383,3.78e-07,64;UBERON:0001135,4.06e-07,15;UBERON:0001134,7.16e-07,62;UBERON:0002036,7.16e-07,62;UBERON:0003082,7.16e-07,62;UBERON:0003104,7.80e-07,160;UBERON:0009142,7.80e-07,160;UBERON:0005256,8.87e-07,122|phase1_expression=0.181678379270557,1.07050261945492,1.26858963686374,1.0007329835313,2.23480547213644,0.872338524100369,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,1.20538905604795,0,1.46379839637152,0.984968464614303,0.816002764977012,1.25381888591235,1.71741592278634,2.46373965131192,1.63205431473244,0,0.0821005894499457,0,0,0,0,0,0.90361775633475,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0.361439152384566,0,0.434539556882471,0,0,2.26883561193763,1.77383517970051,1.93236528524877,1.24430121722827,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0,1.13061588384802,1.25849830862972,1.6507082516404,0.208994966536811,0.775250277507987,1.06729878806013,1.33888245105868,0,0,0.488124115096339,1.10298924103761,1.62028389576352,1.51809538082936,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0.872188104285069,1.49091585508596,2.91250176828533,1.32409180813219,6.02356903572509,1.06400514659507,0,1.06748995729705,0.74000264525148,5.60179863719579,1.34710672069688,1.30769522490767,0,0,0,0.312160076830321,2.2818872861778,0.298897361103602,0.939475989150119,0.323745888736263,0.280901613404497,0.61246251376468,0.368502951935304,0.723280468230358,0,0,8.19145225744224,0.718618141816238,0.336672227908132,0.500474079487857,1.10825646193673,0,0.612975591598039,0.45071417671979,0.567160915800105,5.202299434977,2.34913127700424,3.60284231971255,5.40163972951924,3.40073346486848,2.31876486041066,2.97786970130544,2.19409231913646,4.38466523225394,6.31084435610286,2.66944706062668,0.80823028409406,4.61512470271599,2.72030665214629,2.03472710772585,0,0,0,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0.928735856063958,0,0.709840800239063,0.337169380156203,0.482022059766964,0.661763836394364,0.435758888184812,0.237270619111097,0,0,0,4.42893272774789,0,2.8810180793198,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,0.686271241194102,0.658501712451753,0,0.100528972411631,0.925884451585296,0,0,1.44331342025273,0.927443239800615,1.17408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0,0.0895585227028483,0,0,0,2.11316241631742,1.65862492432618,3.17063897517315,1.76739406796932,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,1.16344544182,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |||
|TSSclassifier=S | |||
|UniProt=B3KPQ6 | |||
|association_with_transcript=0bp_to_ENST00000397620,ENST00000557796,NM_172316,uc001zjm.2_5end | |||
|description=CAGE_peak_11_at_MEIS2_5end | |||
|id=chr15:37391588..37391604,- | |||
|ontology_enrichment_celltype=CL:0000055!2.59e-16!180;CL:0000057!6.40e-10!75;CL:0002620!9.67e-09!23;CL:0000183!9.92e-08!59;CL:0000187!2.58e-07!54;CL:0000220!3.42e-07!246;CL:0000222!3.51e-07!119;CL:0000680!4.43e-07!57;CL:0000056!4.43e-07!57;CL:0000355!4.43e-07!57;CL:0002321!8.11e-07!248;CL:0000393!9.81e-07!60;CL:0000211!9.81e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.12e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.05e-10,76;CL:0000222,6.89e-09,121;CL:0002620,9.24e-09,23;CL:0000187,6.19e-08,55;CL:0000393,1.25e-07,61;CL:0000211,1.25e-07,61;CL:0000680,4.11e-07,58;CL:0000056,4.11e-07,58;CL:0000355,4.11e-07,58;CL:0000192,8.05e-07,43;CL:0000514,8.05e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.62e-07;5!DOID:450;8.62e-07;5!DOID:66;8.62e-07;5!DOID:423;8.62e-07;5!DOID:0080000;8.62e-07;5!DOID:11722;8.62e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.20e-07,5;DOID:450,8.20e-07,5;DOID:66,8.20e-07,5;DOID:423,8.20e-07,5;DOID:0080000,8.20e-07,5;DOID:11722,8.20e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.19e-15!365;UBERON:0000468!4.32e-14!659;UBERON:0000467!1.25e-12!625;UBERON:0000480!1.26e-12!626;UBERON:0000481!9.23e-12!347;UBERON:0000483!6.57e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002100!3.89e-08!216;UBERON:0003104!6.49e-08!238;UBERON:0009142!6.49e-08!238;UBERON:0000062!6.98e-08!511;UBERON:0004111!1.03e-07!241;UBERON:0000922!1.49e-07!612;UBERON:0005256!1.77e-07!143;UBERON:0002050!1.93e-07!605;UBERON:0005423!1.93e-07!605;UBERON:0000923!3.61e-07!604;UBERON:0005291!3.61e-07!604;UBERON:0006598!3.61e-07!604;UBERON:0002532!3.61e-07!604;UBERON:0005156!6.11e-07!59;UBERON:0000990!6.11e-07!59;UBERON:0002385!8.89e-07!63;UBERON:0001015!8.89e-07!63;UBERON:0000383!8.89e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;6.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.20e-08,78;UBERON:0002385,3.78e-07,64;UBERON:0001015,3.78e-07,64;UBERON:0000383,3.78e-07,64;UBERON:0001135,4.06e-07,15;UBERON:0001134,7.16e-07,62;UBERON:0002036,7.16e-07,62;UBERON:0003082,7.16e-07,62;UBERON:0003104,7.80e-07,160;UBERON:0009142,7.80e-07,160;UBERON:0005256,8.87e-07,122 | |||
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| |||
|short_description=p11@MEIS2 | |||
}} |
Revision as of 06:44, 11 September 2013
Short description: | p11@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_MEIS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397620, ENST00000557796, NM_172316, uc001zjm.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | B3KPQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.05e-10 | 76 |
mesodermal cell | 6.89e-09 | 121 |
skin fibroblast | 9.24e-09 | 23 |
muscle cell | 6.19e-08 | 55 |
electrically responsive cell | 1.25e-07 | 61 |
electrically active cell | 1.25e-07 | 61 |
muscle precursor cell | 4.11e-07 | 58 |
myoblast | 4.11e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.11e-07 | 58 |
smooth muscle cell | 8.05e-07 | 43 |
smooth muscle myoblast | 8.05e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.20e-08 | 78 |
muscle tissue | 3.78e-07 | 64 |
musculature | 3.78e-07 | 64 |
musculature of body | 3.78e-07 | 64 |
smooth muscle tissue | 4.06e-07 | 15 |
skeletal muscle tissue | 7.16e-07 | 62 |
striated muscle tissue | 7.16e-07 | 62 |
myotome | 7.16e-07 | 62 |
mesenchyme | 7.80e-07 | 160 |
entire embryonic mesenchyme | 7.80e-07 | 160 |
trunk mesenchyme | 8.87e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.20e-07 | 5 |
myotonic disease | 8.20e-07 | 5 |
muscle tissue disease | 8.20e-07 | 5 |
myopathy | 8.20e-07 | 5 |
muscular disease | 8.20e-07 | 5 |
myotonic dystrophy | 8.20e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.