FFCP PHASE1:Hg19::chr15:89402048..89402061,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=176|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=319|TSSclassifier=N|UniProt=|association_with_transcript=-245bp_to_ENST00000560601_5end|coexpression_cluster_id=C243|description=CAGE_peak_8_at_ACAN_5end|id=chr15:89402048..89402061,+|ontology_enrichment_celltype=CL:0000153!2.85e-35!9;CL:0000447!2.85e-35!9;CL:0000667!1.65e-27!6;CL:0000058!1.65e-27!6;CL:0000138!1.65e-27!6;CL:0000327!2.23e-22!14;CL:0002620!2.22e-20!23;CL:0000499!3.04e-18!27;CL:0000057!1.14e-15!75;CL:0000055!4.04e-15!180;CL:0000214!7.69e-10!3;CL:0000135!1.66e-09!3;CL:0000386!1.66e-09!3;CL:0000388!1.66e-09!3;CL:0002580!2.64e-09!3;CL:0000151!2.07e-08!35;CL:0000134!7.17e-07!358|ontology_enrichment_celltype_v019=CL:0000153;2.07e-87;9!CL:0000447;2.07e-87;9!CL:0000138;5.54e-59;6!CL:0000327;1.33e-52;15!CL:0000499;2.80e-38;28!CL:0000214;4.17e-30;3!CL:0000151;4.15e-17;36!CL:0000135;1.21e-08;3!CL:0000388;1.21e-08;3|ontology_enrichment_celltype_v019_2=CL:0000153,8.49e-88,9;CL:0000447,8.49e-88,9;CL:0000058,4.12e-59,6;CL:0000138,4.12e-59,6;CL:0000327,7.79e-53,15;CL:0000499,2.12e-38,28;CL:0000214,2.30e-30,3;CL:0000151,3.79e-22,36;CL:0000135,1.30e-08,3;CL:0000388,1.30e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4235!6.80e-08!1|ontology_enrichment_disease_v019=DOID:4235;3.28e-23;1|ontology_enrichment_disease_v019_2=DOID:4235,5.13e-23,1|ontology_enrichment_uberon=UBERON:0002097!4.10e-11!40;UBERON:0006915!7.69e-10!3;UBERON:0002018!7.69e-10!3;UBERON:0002217!7.69e-10!3;UBERON:0007616!7.69e-10!3;UBERON:0002199!1.01e-09!45;UBERON:0002416!1.01e-09!45;UBERON:0000043!1.66e-09!3|ontology_enrichment_uberon_v019=UBERON:0006915;4.17e-30;3!UBERON:0007616;4.17e-30;3!UBERON:0002217;4.17e-30;3!UBERON:0002018;4.17e-30;3!UBERON:0004905;5.83e-12;8!UBERON:0000982;5.83e-12;8!UBERON:0004770;5.83e-12;8!UBERON:0004457;9.69e-11;9!UBERON:0000042;9.69e-11;9!UBERON:0007846;1.21e-08;3!UBERON:0000043;1.21e-08;3!UBERON:0007845;1.21e-08;3!UBERON:0000486;2.75e-08;12|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.30e-30,3;UBERON:0007616,2.30e-30,3;UBERON:0002217,2.30e-30,3;UBERON:0002018,2.30e-30,3;UBERON:0004905,4.67e-12,8;UBERON:0000982,4.67e-12,8;UBERON:0004770,4.67e-12,8;UBERON:0007846,1.30e-08,3;UBERON:0000043,1.30e-08,3;UBERON:0007845,1.30e-08,3;UBERON:0004457,2.37e-08,12;UBERON:0000042,2.37e-08,12|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,3.0417768981773,0.795285947051099,10.2193322763554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.179389635688862,0.213557388818567,0,0,0,1.03056216018252,0.558350568994769,0.337552664482532,0.487185025805993,0,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p8@ACAN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=319 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-245bp_to_ENST00000560601_5end | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_8_at_ACAN_5end | |||
|id=chr15:89402048..89402061,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.85e-35!9;CL:0000447!2.85e-35!9;CL:0000667!1.65e-27!6;CL:0000058!1.65e-27!6;CL:0000138!1.65e-27!6;CL:0000327!2.23e-22!14;CL:0002620!2.22e-20!23;CL:0000499!3.04e-18!27;CL:0000057!1.14e-15!75;CL:0000055!4.04e-15!180;CL:0000214!7.69e-10!3;CL:0000135!1.66e-09!3;CL:0000386!1.66e-09!3;CL:0000388!1.66e-09!3;CL:0002580!2.64e-09!3;CL:0000151!2.07e-08!35;CL:0000134!7.17e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.07e-87;9!CL:0000447;2.07e-87;9!CL:0000138;5.54e-59;6!CL:0000327;1.33e-52;15!CL:0000499;2.80e-38;28!CL:0000214;4.17e-30;3!CL:0000151;4.15e-17;36!CL:0000135;1.21e-08;3!CL:0000388;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.49e-88,9;CL:0000447,8.49e-88,9;CL:0000058,4.12e-59,6;CL:0000138,4.12e-59,6;CL:0000327,7.79e-53,15;CL:0000499,2.12e-38,28;CL:0000214,2.30e-30,3;CL:0000151,3.79e-22,36;CL:0000135,1.30e-08,3;CL:0000388,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4235!6.80e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4235;3.28e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.10e-11!40;UBERON:0006915!7.69e-10!3;UBERON:0002018!7.69e-10!3;UBERON:0002217!7.69e-10!3;UBERON:0007616!7.69e-10!3;UBERON:0002199!1.01e-09!45;UBERON:0002416!1.01e-09!45;UBERON:0000043!1.66e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.17e-30;3!UBERON:0007616;4.17e-30;3!UBERON:0002217;4.17e-30;3!UBERON:0002018;4.17e-30;3!UBERON:0004905;5.83e-12;8!UBERON:0000982;5.83e-12;8!UBERON:0004770;5.83e-12;8!UBERON:0004457;9.69e-11;9!UBERON:0000042;9.69e-11;9!UBERON:0007846;1.21e-08;3!UBERON:0000043;1.21e-08;3!UBERON:0007845;1.21e-08;3!UBERON:0000486;2.75e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.30e-30,3;UBERON:0007616,2.30e-30,3;UBERON:0002217,2.30e-30,3;UBERON:0002018,2.30e-30,3;UBERON:0004905,4.67e-12,8;UBERON:0000982,4.67e-12,8;UBERON:0004770,4.67e-12,8;UBERON:0007846,1.30e-08,3;UBERON:0000043,1.30e-08,3;UBERON:0007845,1.30e-08,3;UBERON:0004457,2.37e-08,12;UBERON:0000042,2.37e-08,12 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,3.0417768981773,0.795285947051099,10.2193322763554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.179389635688862,0.213557388818567,0,0,0,1.03056216018252,0.558350568994769,0.337552664482532,0.487185025805993,0,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p8@ACAN | |||
}} |
Revision as of 08:44, 11 September 2013
Short description: | p8@ACAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ACAN_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -245bp_to_ENST00000560601_5end |
EntrezGene: | ACAN |
HGNC: | 319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.49e-88 | 9 |
carbohydrate secreting cell | 8.49e-88 | 9 |
chondroblast | 4.12e-59 | 6 |
chondrocyte | 4.12e-59 | 6 |
extracellular matrix secreting cell | 7.79e-53 | 15 |
stromal cell | 2.12e-38 | 28 |
synovial cell | 2.30e-30 | 3 |
secretory cell | 3.79e-22 | 36 |
fibrocyte | 1.30e-08 | 3 |
tendon cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.30e-30 | 3 |
layer of synovial tissue | 2.30e-30 | 3 |
synovial joint | 2.30e-30 | 3 |
synovial membrane of synovial joint | 2.30e-30 | 3 |
articulation | 4.67e-12 | 8 |
skeletal joint | 4.67e-12 | 8 |
articular system | 4.67e-12 | 8 |
dense regular connective tissue | 1.30e-08 | 3 |
tendon | 1.30e-08 | 3 |
regular connective tissue | 1.30e-08 | 3 |
cavity lining | 2.37e-08 | 12 |
serous membrane | 2.37e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 5.13e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.