FFCP PHASE1:Hg19::chr16:85617170..85617191,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C139|description=CAGE_peak_at_chr16:85617170..85617191,-|id=chr16:85617170..85617191,-|ontology_enrichment_celltype=CL:0000055!5.37e-12!180;CL:0002620!1.26e-10!23;CL:0002556!3.88e-08!6;CL:0000057!4.40e-08!75;CL:0000393!3.70e-07!60;CL:0000211!3.70e-07!60;CL:0000128!5.50e-07!7;CL:0000126!5.50e-07!7;CL:0000127!5.50e-07!7;CL:0002453!5.50e-07!7|ontology_enrichment_celltype_v019=CL:0002127;1.25e-12;1!CL:0000911;1.25e-12;1!CL:0000814;1.25e-12;1!CL:0000319;2.91e-12;1!CL:0002552;1.11e-09;5!CL:0000128;2.48e-07;7!CL:0000126;2.48e-07;7!CL:0000127;2.48e-07;7!CL:0000123;6.07e-07;2!CL:0000575;6.07e-07;2!CL:0000242;6.07e-07;2!CL:0000159;9.27e-07;2!CL:0002598;9.27e-07;2|ontology_enrichment_celltype_v019_2=CL:0002127,1.40e-12,1;CL:0000914,1.40e-12,1;CL:0000911,1.40e-12,1;CL:0000814,1.40e-12,1;CL:0002042,1.40e-12,1;CL:0002039,1.40e-12,1;CL:0002040,1.40e-12,1;CL:0002041,1.40e-12,1;CL:0000319,2.20e-12,1;CL:0002552,1.21e-09,5;CL:0000128,2.37e-07,7;CL:0000126,2.37e-07,7;CL:0000127,2.37e-07,7;CL:0002453,2.37e-07,7;CL:0000575,5.41e-07,2;CL:0000242,6.07e-07,2;CL:0000893,6.42e-07,2;CL:0002489,6.42e-07,2;CL:0000809,6.42e-07,2;CL:0000808,6.42e-07,2;CL:0000894,6.42e-07,2;CL:0000806,6.42e-07,2;CL:0000807,6.42e-07,2;CL:0000805,6.42e-07,2;CL:0002425,6.42e-07,2;CL:0000159,8.06e-07,2;CL:0002598,9.02e-07,2|ontology_enrichment_development_v019=CL:0002425;6.07e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;2.91e-12;1!DOID:3493;5.11e-07;2|ontology_enrichment_disease_v019_2=DOID:3030,2.20e-12,1;DOID:3493,5.11e-07,2|ontology_enrichment_uberon=UBERON:0001444!1.68e-09!48;UBERON:0000475!1.22e-08!365;UBERON:0001758!3.88e-08!6;UBERON:0003672!3.88e-08!6;UBERON:0000914!4.06e-08!83;UBERON:0002329!4.06e-08!83;UBERON:0003077!4.06e-08!83;UBERON:0003059!4.06e-08!83;UBERON:0007282!4.06e-08!83;UBERON:0009618!4.06e-08!83;UBERON:0007285!4.06e-08!83;UBERON:0003102!4.55e-08!95;UBERON:0001801!9.30e-08!14;UBERON:0002203!1.28e-07!6;UBERON:0001768!1.28e-07!6;UBERON:0000488!1.94e-07!4;UBERON:0001456!3.77e-07!21;UBERON:0002097!7.11e-07!40|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0,0,1.43117993565528,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.175669571386252,0,2.91436230634034,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.747243402759005,0.117434498643765,0.161872944368132,0,1.22492502752936,1.10550885580591,0.723280468230358,0,0,0,0,0.673344455816265,0.500474079487857,1.6623846929051,0,0.612975591598039,0.150238058906597,0,0,0.640672166455702,0.211931901159562,0.300091096084402,2.06105058476878,0,0.18611685633159,0,0,0,0.276149695926898,0,0.355009592516614,0.604512589365842,0.339121184620975,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,2.89826012437692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.197030760201927,0,0.128343036279748,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,1.03985430765404,0,0.630809660135739,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,1.27948895655667,0,0,0,0.359744915166629,0,0.471249609382746,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.563391205064483,0.573645408816206,0.0982490410131212,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,4.65681881992542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0677045352543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr16:85617170..85617191,- | |||
|id=chr16:85617170..85617191,- | |||
|ontology_enrichment_celltype=CL:0000055!5.37e-12!180;CL:0002620!1.26e-10!23;CL:0002556!3.88e-08!6;CL:0000057!4.40e-08!75;CL:0000393!3.70e-07!60;CL:0000211!3.70e-07!60;CL:0000128!5.50e-07!7;CL:0000126!5.50e-07!7;CL:0000127!5.50e-07!7;CL:0002453!5.50e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.25e-12;1!CL:0000911;1.25e-12;1!CL:0000814;1.25e-12;1!CL:0000319;2.91e-12;1!CL:0002552;1.11e-09;5!CL:0000128;2.48e-07;7!CL:0000126;2.48e-07;7!CL:0000127;2.48e-07;7!CL:0000123;6.07e-07;2!CL:0000575;6.07e-07;2!CL:0000242;6.07e-07;2!CL:0000159;9.27e-07;2!CL:0002598;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.40e-12,1;CL:0000914,1.40e-12,1;CL:0000911,1.40e-12,1;CL:0000814,1.40e-12,1;CL:0002042,1.40e-12,1;CL:0002039,1.40e-12,1;CL:0002040,1.40e-12,1;CL:0002041,1.40e-12,1;CL:0000319,2.20e-12,1;CL:0002552,1.21e-09,5;CL:0000128,2.37e-07,7;CL:0000126,2.37e-07,7;CL:0000127,2.37e-07,7;CL:0002453,2.37e-07,7;CL:0000575,5.41e-07,2;CL:0000242,6.07e-07,2;CL:0000893,6.42e-07,2;CL:0002489,6.42e-07,2;CL:0000809,6.42e-07,2;CL:0000808,6.42e-07,2;CL:0000894,6.42e-07,2;CL:0000806,6.42e-07,2;CL:0000807,6.42e-07,2;CL:0000805,6.42e-07,2;CL:0002425,6.42e-07,2;CL:0000159,8.06e-07,2;CL:0002598,9.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;6.07e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.91e-12;1!DOID:3493;5.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.20e-12,1;DOID:3493,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001444!1.68e-09!48;UBERON:0000475!1.22e-08!365;UBERON:0001758!3.88e-08!6;UBERON:0003672!3.88e-08!6;UBERON:0000914!4.06e-08!83;UBERON:0002329!4.06e-08!83;UBERON:0003077!4.06e-08!83;UBERON:0003059!4.06e-08!83;UBERON:0007282!4.06e-08!83;UBERON:0009618!4.06e-08!83;UBERON:0007285!4.06e-08!83;UBERON:0003102!4.55e-08!95;UBERON:0001801!9.30e-08!14;UBERON:0002203!1.28e-07!6;UBERON:0001768!1.28e-07!6;UBERON:0000488!1.94e-07!4;UBERON:0001456!3.77e-07!21;UBERON:0002097!7.11e-07!40 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0,0,1.43117993565528,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.175669571386252,0,2.91436230634034,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.747243402759005,0.117434498643765,0.161872944368132,0,1.22492502752936,1.10550885580591,0.723280468230358,0,0,0,0,0.673344455816265,0.500474079487857,1.6623846929051,0,0.612975591598039,0.150238058906597,0,0,0.640672166455702,0.211931901159562,0.300091096084402,2.06105058476878,0,0.18611685633159,0,0,0,0.276149695926898,0,0.355009592516614,0.604512589365842,0.339121184620975,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,2.89826012437692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.197030760201927,0,0.128343036279748,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,1.03985430765404,0,0.630809660135739,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,1.27948895655667,0,0,0,0.359744915166629,0,0.471249609382746,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.563391205064483,0.573645408816206,0.0982490410131212,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,4.65681881992542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0677045352543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60857851499485,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,3.63155864376399,0,0,0,0,0,1.63757624423474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.504665699340316,1.09265571963696,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.186224142887574,0.33639558774184,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:85617170..85617191,- | |||
}} |
Revision as of 11:52, 11 September 2013
Short description: | p@chr16:85617170..85617191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:85617170..85617191, - |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.40e-12 | 1 |
immature NK T cell | 1.40e-12 | 1 |
effector T cell | 1.40e-12 | 1 |
mature NK T cell | 1.40e-12 | 1 |
immature NK T cell stage IV | 1.40e-12 | 1 |
immature NK T cell stage I | 1.40e-12 | 1 |
immature NK T cell stage II | 1.40e-12 | 1 |
immature NK T cell stage III | 1.40e-12 | 1 |
mucus secreting cell | 2.20e-12 | 1 |
fibroblast of gingiva | 1.21e-09 | 5 |
oligodendrocyte | 2.37e-07 | 7 |
macroglial cell | 2.37e-07 | 7 |
astrocyte | 2.37e-07 | 7 |
oligodendrocyte precursor cell | 2.37e-07 | 7 |
corneal epithelial cell | 5.41e-07 | 2 |
Merkel cell | 6.07e-07 | 2 |
thymocyte | 6.42e-07 | 2 |
double negative thymocyte | 6.42e-07 | 2 |
double-positive, alpha-beta thymocyte | 6.42e-07 | 2 |
DN4 thymocyte | 6.42e-07 | 2 |
DN1 thymic pro-T cell | 6.42e-07 | 2 |
DN2 thymocyte | 6.42e-07 | 2 |
DN3 thymocyte | 6.42e-07 | 2 |
immature single positive thymocyte | 6.42e-07 | 2 |
early T lineage precursor | 6.42e-07 | 2 |
seromucus secreting cell | 8.06e-07 | 2 |
bronchial smooth muscle cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.20e-12 | 1 |
signet ring cell adenocarcinoma | 5.11e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.