FFCP PHASE1:Hg19::chr19:55660564..55660582,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7138|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11948|TSSclassifier=N|UniProt=Q3B759|association_with_transcript=0bp_to_ENST00000537693_5end|coexpression_cluster_id=C9|description=CAGE_peak_1_at_TNNT1_5end|id=chr19:55660564..55660582,-|ontology_enrichment_celltype=CL:0000188!4.15e-08!9|ontology_enrichment_celltype_v019=CL:0000188;2.79e-12;9!CL:0002321;2.08e-09;15!CL:0000680;1.02e-08;7!CL:0002322;1.46e-08;5|ontology_enrichment_celltype_v019_2=CL:0000188,2.93e-12,9;CL:0002322,1.28e-08,5|ontology_enrichment_development_v019=UBERON:0006603;7.02e-07;65|ontology_enrichment_disease=DOID:0050687!9.91e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.13e-10!115;UBERON:0003104!2.74e-07!238;UBERON:0009142!2.74e-07!238;UBERON:0003135!3.26e-07!11;UBERON:0003101!4.49e-07!22;UBERON:0000079!4.49e-07!22;UBERON:0000468!4.70e-07!659|ontology_enrichment_uberon_v019=UBERON:0001134;6.08e-24;16!UBERON:0002036;6.08e-24;16!UBERON:0002385;4.55e-10;31!UBERON:0001015;4.55e-10;31!UBERON:0000383;4.55e-10;31!UBERON:0003135;4.08e-09;11!UBERON:0000922;7.17e-08;49|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.94e-09,11;UBERON:0007023,4.92e-08,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.3073348449713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,1.50142223846357,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,10.9776335516636,11.9276791489337,5.80969714347592,13.7869203170443,4.79409616663694,21.533664185474,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,5.60967095213783,0.4115740113314,157.29932118253,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.3838947203176,5.34238438630997,16.2945476548305,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,2.54541504701563,235.396388734247,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,138.819151467487,13.2481810718594,35.1523415122837,37.9050574332459,1.28904293841928,24.3628045775904,66.732449266807,1362.45724150202,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0.539617372749944,0,0,0,0,0,12.1908434772398,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,18.8010365184353,108.76022364476,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.7260067788136,2.42721043499027,0,0,2.14870036263921,0.296964680832639,0.614321404198464,0,0,0,0,19.4235375477754,5.77819165928102,0,0,0.409074730008619,0,0,0,0,0,9.37112353550869,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,2.33283690706603,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,7.35035971456492,0,0,0,0,0,0,0,0.067401132980677,3635.67674226351,0,0,0.19566461893209,0,1.18375320854817,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.853828638089378,1.38674673013139,0.347119476670262,0.195984794828755,0,616.086232221398,55.5514884883321,0.0967563312890851,0,0.0821154570532092,240.144804825326,171.658166414968,204.738551147162,0,0,0.633107959558787,0.195551382734803,0.0801588202515337,0,0,0,1.03082936549324,0,0,0.248505071130865,0.235694034616795,3.26170094576674,4.28871669880566,0.101998217636322,0,0,0,0,0,0,12.2884256559792,19.0203151929697,5.74298419661451,8.38651802095763,14.1644595885068,12.274430159303,1.47803639470798,0,11.6495949527454,0.86661500537946,0.329663433524666,0.674035438541849,0,0,0,0,5.94786649320571,8.5274450690285,11.6323294648172,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0.191915197319445,3.57347663186684,3.31045985182716,2.5426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,1.57204305099666,0.828478110694391,0,0,0,0,0,1.5041393641362,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,2.65164207385125,8.0501728560824,4.44905610798268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.414465389503,0,0,1.26184898228651,0.963099152036517,2.78774068787403,0,0,0.231522474323834,0,0,6.17602894321944,4.60496504115285,0.176689145945881,1.15748422962549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0,0,0,0,0,0,0,0.169732529954025,0,0.619678821295011,3.35186950783946,0.954013051960256,0,0.80057074828547,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11948 | |||
|TSSclassifier=N | |||
|UniProt=Q3B759 | |||
|association_with_transcript=0bp_to_ENST00000537693_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_TNNT1_5end | |||
|id=chr19:55660564..55660582,- | |||
|ontology_enrichment_celltype=CL:0000188!4.15e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.79e-12;9!CL:0002321;2.08e-09;15!CL:0000680;1.02e-08;7!CL:0002322;1.46e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.93e-12,9;CL:0002322,1.28e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006603;7.02e-07;65 | |||
|ontology_enrichment_disease=DOID:0050687!9.91e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-10!115;UBERON:0003104!2.74e-07!238;UBERON:0009142!2.74e-07!238;UBERON:0003135!3.26e-07!11;UBERON:0003101!4.49e-07!22;UBERON:0000079!4.49e-07!22;UBERON:0000468!4.70e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.08e-24;16!UBERON:0002036;6.08e-24;16!UBERON:0002385;4.55e-10;31!UBERON:0001015;4.55e-10;31!UBERON:0000383;4.55e-10;31!UBERON:0003135;4.08e-09;11!UBERON:0000922;7.17e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.94e-09,11;UBERON:0007023,4.92e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.3073348449713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,1.50142223846357,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,10.9776335516636,11.9276791489337,5.80969714347592,13.7869203170443,4.79409616663694,21.533664185474,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,5.60967095213783,0.4115740113314,157.29932118253,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.3838947203176,5.34238438630997,16.2945476548305,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,2.54541504701563,235.396388734247,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,138.819151467487,13.2481810718594,35.1523415122837,37.9050574332459,1.28904293841928,24.3628045775904,66.732449266807,1362.45724150202,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0.539617372749944,0,0,0,0,0,12.1908434772398,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,18.8010365184353,108.76022364476,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.7260067788136,2.42721043499027,0,0,2.14870036263921,0.296964680832639,0.614321404198464,0,0,0,0,19.4235375477754,5.77819165928102,0,0,0.409074730008619,0,0,0,0,0,9.37112353550869,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,2.33283690706603,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,7.35035971456492,0,0,0,0,0,0,0,0.067401132980677,3635.67674226351,0,0,0.19566461893209,0,1.18375320854817,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.853828638089378,1.38674673013139,0.347119476670262,0.195984794828755,0,616.086232221398,55.5514884883321,0.0967563312890851,0,0.0821154570532092,240.144804825326,171.658166414968,204.738551147162,0,0,0.633107959558787,0.195551382734803,0.0801588202515337,0,0,0,1.03082936549324,0,0,0.248505071130865,0.235694034616795,3.26170094576674,4.28871669880566,0.101998217636322,0,0,0,0,0,0,12.2884256559792,19.0203151929697,5.74298419661451,8.38651802095763,14.1644595885068,12.274430159303,1.47803639470798,0,11.6495949527454,0.86661500537946,0.329663433524666,0.674035438541849,0,0,0,0,5.94786649320571,8.5274450690285,11.6323294648172,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0.191915197319445,3.57347663186684,3.31045985182716,2.5426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,1.57204305099666,0.828478110694391,0,0,0,0,0,1.5041393641362,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,2.65164207385125,8.0501728560824,4.44905610798268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.414465389503,0,0,1.26184898228651,0.963099152036517,2.78774068787403,0,0,0.231522474323834,0,0,6.17602894321944,4.60496504115285,0.176689145945881,1.15748422962549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0,0,0,0,0,0,0,0.169732529954025,0,0.619678821295011,3.35186950783946,0.954013051960256,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,11.4215536207324,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0.40341013740704,0,0,0.163771917510097,0,0.810451015420736,0,0,0,0,101.427686868579,2784.24092194233,18.6423519021198,0,0,1.3451348888753,1.21393120847326,1.13831095675649,0.79832133146375,0,0,0.135939465953663,2.23627430113687,0.118193840883968,0.333694205676207,14.050263620242,0,14.8544246556308,2.73947616152849,1.51149313853035,0,0.214429632529969,5.68849002237816,0.116241425368125,498.7993832361,0,0,0,0,125.626388775521,0,0,0,1.14553434272025,0,0.955538938977433,0.782988022584546,0,0,24654.7375489522,11467.0248746154,520.756679670851,80.142313854758,0.233939463462106,1.59160620129095,0.356760272332706,0,4.28768015307174,0.905777061400041,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0,0,21.9780978343368,0,0,0.128915775947154,0,0,0,0,0.730336388246517,328.908896201056,0,3.62874593044325,0.0679914901909147,0,1.5870805215462,0.371995018166751,0,0,3.40649347054713,0,1.64708051314868,10.912804782392,1.87052183685892,24.5359381758036,5.0141507858475,16.5197562115762,0.535928260312357,0,0,4525.25156390262,211.401215139801,0.775066918032073,4.77975300078106,4.03674705290208,208.44444336099,255.071892465273,2908.26031840761,1346.00357316841,425.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| |||
|short_description=p1@TNNT1 | |||
}} |
Revision as of 22:25, 11 September 2013
Short description: | p1@TNNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TNNT1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000537693_5end |
EntrezGene: | TNNT1 |
HGNC: | 11948 |
UniProt: | Q3B759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.93e-12 | 9 |
embryonic stem cell | 1.28e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.94e-09 | 11 |
adult organism | 4.92e-08 | 114 |
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