CL:0000188
From FANTOM5_SSTAR
Name: | cell of skeletal muscle | |
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Namespace: | FANTOM | |
Definition: | "A somatic cell located in skeletal muscle." [GOC:tfm] | |
Xrefs: |
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Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002371(somatic cell) |
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part_of: | UBERON:0001134(skeletal muscle tissue) |
Children
is a: | CL:0000355 (multi-potent skeletal muscle stem cell),CL:0000594 (skeletal muscle satellite cell) |
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derives from: | FF:0000162 (human skeletal muscle cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11281-116I3 (Skeletal Muscle Cells, donor1)
- 11282-116I4 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1)
- 11321-117D7 (Skeletal Muscle Satellite Cells, donor2)
- 11358-117H8 (Skeletal Muscle Cells, donor2)
- 11359-117H9 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor2)
- 11397-118D2 (Skeletal Muscle Satellite Cells, donor3)
- 11430-118G8 (Skeletal Muscle Cells, donor3)
- 11431-118G9 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor3)
- 11451-119A2 (Skeletal Muscle Cells, donor4)
... further results Mouse (Mus musculus)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11281-116I3 (Skeletal Muscle Cells, donor1)
- 11282-116I4 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1)
- 11321-117D7 (Skeletal Muscle Satellite Cells, donor2)
- 11358-117H8 (Skeletal Muscle Cells, donor2)
- 11359-117H9 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor2)
- 11397-118D2 (Skeletal Muscle Satellite Cells, donor3)
- 11430-118G8 (Skeletal Muscle Cells, donor3)
- 11431-118G9 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor3)
- 11451-119A2 (Skeletal Muscle Cells, donor4)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000188 (cell of skeletal muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data