CL:0000594
From FANTOM5_SSTAR
Name: | skeletal muscle satellite cell |
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Namespace: | FANTOM |
Definition: | "An elongated, spindle-shaped, quiescent myoblast that are located between the basal lamina and the plasmalemma of the muscle fibres. They are thought to play a role in muscle repair and regeneration." [GOC:tfm, MESH:A.11.635.500.700] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000188(cell of skeletal muscle),CL:0000680(muscle precursor cell) |
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part_of: | UBERON:0001134(skeletal muscle tissue) |
Children
derives from: | FF:0000165 (human skeletal muscle satellite cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11321-117D7 (Skeletal Muscle Satellite Cells, donor2)
- 11397-118D2 (Skeletal Muscle Satellite Cells, donor3)
Mouse (Mus musculus)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11321-117D7 (Skeletal Muscle Satellite Cells, donor2)
- 11397-118D2 (Skeletal Muscle Satellite Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000594 (skeletal muscle satellite cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data