FFCP PHASE1:Hg19::chr1:114354857..114354870,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54665|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25642|TSSclassifier=S|UniProt=|association_with_transcript=199bp_to_uc001edr.2_5end|description=CAGE_peak_2_at_RSBN1_5end|id=chr1:114354857..114354870,-|ontology_enrichment_celltype=CL:0000037!9.22e-17!172;CL:0000566!9.22e-17!172;CL:0002032!3.33e-15!165;CL:0000837!3.33e-15!165;CL:0000988!2.27e-14!182;CL:0000738!1.21e-13!140;CL:0000542!8.82e-11!53;CL:0000051!8.82e-11!53;CL:0000838!2.34e-10!52;CL:0002031!5.91e-10!124;CL:0002087!5.05e-09!119;CL:0000084!3.89e-08!25;CL:0000827!3.89e-08!25|ontology_enrichment_celltype_v019=CL:0000084;4.17e-15;25!CL:0000624;3.49e-14;6!CL:0000791;9.07e-12;18!CL:0000789;9.07e-12;18!CL:0002419;9.07e-12;18!CL:0000542;1.61e-10;53!CL:0000094;2.63e-10;8!CL:0000623;9.26e-08;3!CL:0000898;1.55e-07;3!CL:0000081;2.99e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,7.08e-23,168;CL:0000988,5.48e-21,177;CL:0002032,6.18e-21,161;CL:0000837,6.18e-21,161;CL:0000542,6.68e-20,53;CL:0000051,6.68e-20,53;CL:0000738,1.38e-19,136;CL:0000838,9.51e-19,52;CL:0000084,5.28e-15,25;CL:0000827,5.28e-15,25;CL:0000624,1.87e-14,6;CL:0002031,8.36e-14,120;CL:0000791,6.85e-12,18;CL:0000789,6.85e-12,18;CL:0002420,6.85e-12,18;CL:0002419,6.85e-12,18;CL:0000790,6.85e-12,18;CL:0002087,9.73e-12,115;CL:0000094,1.91e-10,8;CL:0000623,5.71e-08,3;CL:0000825,5.71e-08,3;CL:0000898,8.23e-08,3;CL:0000134,1.15e-07,354;CL:0000081,2.39e-07,11;CL:0002320,2.99e-07,361|ontology_enrichment_development_v019=CL:0000790;9.07e-12;18!CL:0000051;1.61e-10;53|ontology_enrichment_disease=DOID:2531!7.62e-10!51;DOID:0060083!7.62e-10!51;DOID:1240!1.28e-07!39|ontology_enrichment_disease_v019=DOID:1240;6.11e-07;39|ontology_enrichment_disease_v019_2=DOID:2531,2.29e-10,51;DOID:0060083,2.29e-10,51;DOID:1240,1.21e-08,39|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.655324116390517,0,0.37129905888014,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.61130724598361,1.06730766284929,1.10195093839151,1.57345710739562,0.767658796194425,1.23852898652861,0,0,0,3.02122082263176,1.42169232487422,1.17440175733939,0.553995408531877,1.00272223735071,1.95309783644267,0,0,0,0.290796477559129,1.51150377475524,1.21292030593908,0.464858073811369,0.411167888021826,0,0,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.674170453335254,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0,0.56738522469114,1.24564449799115,0,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,1.58030450865046,3.540775862049,3.53709686474248,4.11202997999018,0.501559486172034,1.95553359980154,0.473447805734733,3.89653456815823,0.334231370655521,2.3568472597987,0.664601683750863,0.812411591295047,0.128091319725675,0.390178042679635,0.328875809207352,0.829050053357545,0.579606171470105,1.18629250529648,0.267540828089713,0,0.339928028092699,2.29932296161153,1.71813722741315,1.26509846009751,0.637130828648193,0.651083453856419,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0,5.24177532384304,4.27904313253612,4.05508330871837,0,0,0,0,0,0,0,0.973269740605272,0.189069634328136,0,0.263504357079378,0.851363990735132,0,0,0,0.348259474598534,0.797747763113191,0.953962497221368,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0.66944122552934,0,0,0.976248230192678,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,3.9534125230819,3.87780264148325,0.872188104285069,0,0.25326102332916,0.132409180813219,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0.570471821544449,0,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.619954687054593,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.265059536642971,0.69716365721711,0.10366105501537,0,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0,0,1.7658523976586,0.122988438543114,0,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,1.58040879591855,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.704387472105808,0.829312462163088,1.29707958075265,1.13618190083742,0.317489471460845,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25642 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=199bp_to_uc001edr.2_5end | |||
|description=CAGE_peak_2_at_RSBN1_5end | |||
|id=chr1:114354857..114354870,- | |||
|ontology_enrichment_celltype=CL:0000037!9.22e-17!172;CL:0000566!9.22e-17!172;CL:0002032!3.33e-15!165;CL:0000837!3.33e-15!165;CL:0000988!2.27e-14!182;CL:0000738!1.21e-13!140;CL:0000542!8.82e-11!53;CL:0000051!8.82e-11!53;CL:0000838!2.34e-10!52;CL:0002031!5.91e-10!124;CL:0002087!5.05e-09!119;CL:0000084!3.89e-08!25;CL:0000827!3.89e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.17e-15;25!CL:0000624;3.49e-14;6!CL:0000791;9.07e-12;18!CL:0000789;9.07e-12;18!CL:0002419;9.07e-12;18!CL:0000542;1.61e-10;53!CL:0000094;2.63e-10;8!CL:0000623;9.26e-08;3!CL:0000898;1.55e-07;3!CL:0000081;2.99e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.08e-23,168;CL:0000988,5.48e-21,177;CL:0002032,6.18e-21,161;CL:0000837,6.18e-21,161;CL:0000542,6.68e-20,53;CL:0000051,6.68e-20,53;CL:0000738,1.38e-19,136;CL:0000838,9.51e-19,52;CL:0000084,5.28e-15,25;CL:0000827,5.28e-15,25;CL:0000624,1.87e-14,6;CL:0002031,8.36e-14,120;CL:0000791,6.85e-12,18;CL:0000789,6.85e-12,18;CL:0002420,6.85e-12,18;CL:0002419,6.85e-12,18;CL:0000790,6.85e-12,18;CL:0002087,9.73e-12,115;CL:0000094,1.91e-10,8;CL:0000623,5.71e-08,3;CL:0000825,5.71e-08,3;CL:0000898,8.23e-08,3;CL:0000134,1.15e-07,354;CL:0000081,2.39e-07,11;CL:0002320,2.99e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;9.07e-12;18!CL:0000051;1.61e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!7.62e-10!51;DOID:0060083!7.62e-10!51;DOID:1240!1.28e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.11e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.29e-10,51;DOID:0060083,2.29e-10,51;DOID:1240,1.21e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@RSBN1 | |||
}} |
Revision as of 23:37, 11 September 2013
Short description: | p2@RSBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RSBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 199bp_to_uc001edr.2_5end |
EntrezGene: | RSBN1 |
HGNC: | 25642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.08e-23 | 168 |
hematopoietic cell | 5.48e-21 | 177 |
hematopoietic oligopotent progenitor cell | 6.18e-21 | 161 |
hematopoietic multipotent progenitor cell | 6.18e-21 | 161 |
lymphocyte | 6.68e-20 | 53 |
common lymphoid progenitor | 6.68e-20 | 53 |
leukocyte | 1.38e-19 | 136 |
lymphoid lineage restricted progenitor cell | 9.51e-19 | 52 |
T cell | 5.28e-15 | 25 |
pro-T cell | 5.28e-15 | 25 |
CD4-positive, alpha-beta T cell | 1.87e-14 | 6 |
hematopoietic lineage restricted progenitor cell | 8.36e-14 | 120 |
mature alpha-beta T cell | 6.85e-12 | 18 |
alpha-beta T cell | 6.85e-12 | 18 |
immature T cell | 6.85e-12 | 18 |
mature T cell | 6.85e-12 | 18 |
immature alpha-beta T cell | 6.85e-12 | 18 |
nongranular leukocyte | 9.73e-12 | 115 |
granulocyte | 1.91e-10 | 8 |
natural killer cell | 5.71e-08 | 3 |
pro-NK cell | 5.71e-08 | 3 |
naive T cell | 8.23e-08 | 3 |
mesenchymal cell | 1.15e-07 | 354 |
blood cell | 2.39e-07 | 11 |
connective tissue cell | 2.99e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.29e-10 | 51 |
immune system cancer | 2.29e-10 | 51 |
leukemia | 1.21e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.