FFCP PHASE1:Hg19::chr1:156783663..156783673,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9047|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10821|TSSclassifier=W|UniProt=|association_with_transcript=229bp_to_ENST00000468744_5end|coexpression_cluster_id=C137|description=CAGE_peak_11_at_SH2D2A_5end|id=chr1:156783663..156783673,-|ontology_enrichment_celltype=CL:0002368!1.78e-07!13|ontology_enrichment_celltype_v019=CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0002577;9.90e-11;3!CL:0000307;9.90e-11;3!CL:0000622;6.04e-07;5|ontology_enrichment_celltype_v019_2=CL:0000317,2.37e-15,2;CL:1000448,2.37e-15,2;CL:0002308,2.37e-15,2;CL:0002140,2.37e-15,2;CL:0002577,8.17e-11,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0000622,6.39e-07,5|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4556;6.73e-11;3!DOID:3908;4.79e-07;5|ontology_enrichment_disease_v019_2=DOID:4556,6.73e-11,3;DOID:3908,4.79e-07,5|ontology_enrichment_uberon=UBERON:0001737!7.03e-09!9;UBERON:0000065!2.18e-08!53;UBERON:0000072!2.90e-07!46;UBERON:0001557!9.40e-07!19|ontology_enrichment_uberon_v019=UBERON:0001905;2.05e-15;2!UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0002757;2.05e-15;2!UBERON:0010134;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0005408;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0001899;2.05e-15;2!UBERON:0001987;2.26e-08;4!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0002784;2.26e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.78e-15,2;UBERON:0002757,1.78e-15,2;UBERON:0010134,1.78e-15,2;UBERON:0005408,1.78e-15,2;UBERON:0001899,1.78e-15,2;UBERON:0002419,2.37e-15,2;UBERON:0007771,2.37e-15,2;UBERON:0003297,2.37e-15,2;UBERON:0001821,2.37e-15,2;UBERON:0003487,2.37e-15,2;UBERON:0001820,2.37e-15,2;UBERON:0005089,2.37e-15,2;UBERON:0005088,2.37e-15,2;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4;UBERON:0003296,2.11e-08,4;UBERON:0010133,2.11e-08,4;UBERON:0002784,2.11e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.640456598628376,0.390178042679635,0.164437904603676,0,0.579606171470105,0,0,0,0.339928028092699,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.731842236777572,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0.435758888184812,0.71181185733329,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,1.48323486804084,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0.166211681900156,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,10.0400910026393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,1.60710550763486,0.672567444437648,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0.275684698604535,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@SH2D2A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10821 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=229bp_to_ENST00000468744_5end | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_11_at_SH2D2A_5end | |||
|id=chr1:156783663..156783673,- | |||
|ontology_enrichment_celltype=CL:0002368!1.78e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0002577;9.90e-11;3!CL:0000307;9.90e-11;3!CL:0000622;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.37e-15,2;CL:1000448,2.37e-15,2;CL:0002308,2.37e-15,2;CL:0002140,2.37e-15,2;CL:0002577,8.17e-11,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0000622,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;6.73e-11;3!DOID:3908;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,6.73e-11,3;DOID:3908,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.03e-09!9;UBERON:0000065!2.18e-08!53;UBERON:0000072!2.90e-07!46;UBERON:0001557!9.40e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.05e-15;2!UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0002757;2.05e-15;2!UBERON:0010134;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0005408;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0001899;2.05e-15;2!UBERON:0001987;2.26e-08;4!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0002784;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.78e-15,2;UBERON:0002757,1.78e-15,2;UBERON:0010134,1.78e-15,2;UBERON:0005408,1.78e-15,2;UBERON:0001899,1.78e-15,2;UBERON:0002419,2.37e-15,2;UBERON:0007771,2.37e-15,2;UBERON:0003297,2.37e-15,2;UBERON:0001821,2.37e-15,2;UBERON:0003487,2.37e-15,2;UBERON:0001820,2.37e-15,2;UBERON:0005089,2.37e-15,2;UBERON:0005088,2.37e-15,2;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4;UBERON:0003296,2.11e-08,4;UBERON:0010133,2.11e-08,4;UBERON:0002784,2.11e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.640456598628376,0.390178042679635,0.164437904603676,0,0.579606171470105,0,0,0,0.339928028092699,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.731842236777572,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0.435758888184812,0.71181185733329,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,1.48323486804084,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0.166211681900156,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,10.0400910026393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,1.60710550763486,0.672567444437648,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0.275684698604535,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SH2D2A | |||
}} |
Revision as of 00:57, 12 September 2013
Short description: | p11@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SH2D2A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 229bp_to_ENST00000468744_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.37e-15 | 2 |
epithelial cell of sweat gland | 2.37e-15 | 2 |
epithelial cell of skin gland | 2.37e-15 | 2 |
acinar cell of sebaceous gland | 2.37e-15 | 2 |
placental epithelial cell | 8.17e-11 | 3 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
acinar cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.78e-15 | 2 |
regional part of epithalamus | 1.78e-15 | 2 |
secretory circumventricular organ | 1.78e-15 | 2 |
circumventricular organ | 1.78e-15 | 2 |
epithalamus | 1.78e-15 | 2 |
skin gland | 2.37e-15 | 2 |
epidermis gland | 2.37e-15 | 2 |
gland of integumental system | 2.37e-15 | 2 |
sebaceous gland | 2.37e-15 | 2 |
skin sebaceous gland | 2.37e-15 | 2 |
sweat gland | 2.37e-15 | 2 |
sweat gland placode | 2.37e-15 | 2 |
sebaceous gland placode | 2.37e-15 | 2 |
placenta | 1.96e-08 | 4 |
allantois | 1.96e-08 | 4 |
gland of diencephalon | 2.11e-08 | 4 |
neuroendocrine gland | 2.11e-08 | 4 |
regional part of diencephalon | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.73e-11 | 3 |
non-small cell lung carcinoma | 4.79e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.