FFCP PHASE1:Hg19::chr1:180166031..180166045,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:180166031..180166045,+|id=chr1:180166031..180166045,+|ontology_enrichment_celltype=CL:0000055!8.55e-11!180;CL:0000057!3.57e-09!75;CL:0000144!3.80e-09!625;CL:0000548!1.82e-08!679;CL:0000004!1.82e-08!679;CL:0000255!1.82e-08!679;CL:0000012!3.78e-08!682;CL:0002371!1.10e-07!591;CL:0000723!2.10e-07!436;CL:0000048!2.18e-07!430;CL:0000499!4.86e-07!27;CL:0000034!7.51e-07!444|ontology_enrichment_celltype_v019=CL:0000499;5.19e-10;28!CL:0002541;1.03e-07;3!CL:0000135;1.99e-07;3!CL:0002622;1.99e-07;3!CL:0000388;1.99e-07;3|ontology_enrichment_celltype_v019_2=CL:0000499,5.03e-10,28;CL:0002541,7.14e-08,3;CL:0000135,1.44e-07,3;CL:0000388,1.44e-07,3;CL:0002622,2.76e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.03e-07;3!DOID:127;1.03e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,1.10e-07,3;DOID:127,1.10e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003124;1.03e-07;3!UBERON:0000920;1.03e-07;3!UBERON:0007846;1.99e-07;3!UBERON:0000043;1.99e-07;3!UBERON:0007845;1.99e-07;3!UBERON:0002367;2.01e-07;11!UBERON:0010147;2.01e-07;11!UBERON:0003937;8.30e-07;12!UBERON:0005399;8.30e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.14e-08,3;UBERON:0007846,1.44e-07,3;UBERON:0000043,1.44e-07,3;UBERON:0007845,1.44e-07,3;UBERON:0002367,2.34e-07,11;UBERON:0010147,2.34e-07,11;UBERON:0009846,2.34e-07,11;UBERON:0003353,2.34e-07,11;UBERON:0004902,2.34e-07,11;UBERON:0003820,2.34e-07,11;UBERON:0009847,2.34e-07,11;UBERON:0003937,9.50e-07,12;UBERON:0005399,9.50e-07,12|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0,1.80808358407193,0.730310090387373,0.487932798790507,0,0,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,1.16214518452842,0,0,0.575384784644301,0.512321413058201,0,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.612167784741805,0,0,0.659702600373432,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.434377689410233,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,2.1686349143074,0,1.44846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,1.6507082516404,0,0.516833518338658,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.662045904066094,1.72101972449288,0.354668382198357,0,0,1.48000529050296,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.206651562351531,2.37600571456411,2.47266929278557,0,0,0,0.125118519871964,0,0,0.612975591598039,0.600952235626387,0.340296549480063,1.25572744982203,0.213557388818567,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0,1.44375896333917,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.57191197463259,1.08524321078289,0,0,1.77695974371273,0,0.602878754119172,0,1.29964888536674,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.207970861530807,1.96271887676878,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0.896974044789907,0,0.804269605718038,0,0.462629081407967,0.887808626565635,0,1.03850885836724,0.348631135379878,0,1.40354529212299,0.0920809889358963,0.918515585316854,1.0925470080403,1.44236856455367,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0,0.30347334256665,0,0.94443704049192,0,0.308033580176089,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:180166031..180166045,+ | |||
|id=chr1:180166031..180166045,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.55e-11!180;CL:0000057!3.57e-09!75;CL:0000144!3.80e-09!625;CL:0000548!1.82e-08!679;CL:0000004!1.82e-08!679;CL:0000255!1.82e-08!679;CL:0000012!3.78e-08!682;CL:0002371!1.10e-07!591;CL:0000723!2.10e-07!436;CL:0000048!2.18e-07!430;CL:0000499!4.86e-07!27;CL:0000034!7.51e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000499;5.19e-10;28!CL:0002541;1.03e-07;3!CL:0000135;1.99e-07;3!CL:0002622;1.99e-07;3!CL:0000388;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,5.03e-10,28;CL:0002541,7.14e-08,3;CL:0000135,1.44e-07,3;CL:0000388,1.44e-07,3;CL:0002622,2.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.03e-07;3!DOID:127;1.03e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.10e-07,3;DOID:127,1.10e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.03e-07;3!UBERON:0000920;1.03e-07;3!UBERON:0007846;1.99e-07;3!UBERON:0000043;1.99e-07;3!UBERON:0007845;1.99e-07;3!UBERON:0002367;2.01e-07;11!UBERON:0010147;2.01e-07;11!UBERON:0003937;8.30e-07;12!UBERON:0005399;8.30e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.14e-08,3;UBERON:0007846,1.44e-07,3;UBERON:0000043,1.44e-07,3;UBERON:0007845,1.44e-07,3;UBERON:0002367,2.34e-07,11;UBERON:0010147,2.34e-07,11;UBERON:0009846,2.34e-07,11;UBERON:0003353,2.34e-07,11;UBERON:0004902,2.34e-07,11;UBERON:0003820,2.34e-07,11;UBERON:0009847,2.34e-07,11;UBERON:0003937,9.50e-07,12;UBERON:0005399,9.50e-07,12 | |||
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| |||
|short_description=p@chr1:180166031..180166045,+ | |||
}} |
Revision as of 02:04, 12 September 2013
Short description: | p@chr1:180166031..180166045, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:180166031..180166045, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 5.03e-10 | 28 |
chorionic membrane mesenchymal stem cell | 7.14e-08 | 3 |
fibrocyte | 1.44e-07 | 3 |
tendon cell | 1.44e-07 | 3 |
prostate stromal cell | 2.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.14e-08 | 3 |
dense regular connective tissue | 1.44e-07 | 3 |
tendon | 1.44e-07 | 3 |
regular connective tissue | 1.44e-07 | 3 |
prostate gland | 2.34e-07 | 11 |
male accessory sex gland | 2.34e-07 | 11 |
embryonic cloacal epithelium | 2.34e-07 | 11 |
epithelium of hindgut | 2.34e-07 | 11 |
urogenital sinus epithelium | 2.34e-07 | 11 |
prostate bud | 2.34e-07 | 11 |
prostate field | 2.34e-07 | 11 |
sex gland | 9.50e-07 | 12 |
male reproductive gland | 9.50e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.10e-07 | 3 |
leiomyoma | 1.10e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.