FFCP PHASE1:Hg19::chr1:203052309..203052311,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C480|description=CAGE_peak_at_chr1:203052309..203052311,-|id=chr1:203052309..203052311,-|ontology_enrichment_celltype=CL:0000188!4.27e-52!9;CL:0000594!2.89e-22!3;CL:0002575!4.00e-16!2;CL:0000183!4.60e-11!59;CL:0000680!3.22e-09!57;CL:0000056!3.22e-09!57;CL:0000355!3.22e-09!57;CL:0000187!8.54e-08!54;CL:0000669!5.73e-07!5;CL:0000393!6.61e-07!60;CL:0000211!6.61e-07!60|ontology_enrichment_celltype_v019=CL:0000188;2.94e-39;9!CL:0002575;1.48e-12;2!CL:0000669;6.50e-07;4|ontology_enrichment_celltype_v019_2=CL:0000188,2.42e-39,9;CL:0002575,1.48e-12,2;CL:0000669,6.50e-07,4;CL:0000187,8.59e-07,55|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!1.57e-15!61;UBERON:0002036!1.57e-15!61;UBERON:0003082!1.57e-15!61;UBERON:0002385!5.71e-15!63;UBERON:0001015!5.71e-15!63;UBERON:0000383!5.71e-15!63;UBERON:0004290!2.94e-13!70;UBERON:0000486!5.17e-13!82;UBERON:0001723!4.43e-11!3;UBERON:0001033!4.43e-11!3;UBERON:0010056!4.43e-11!3;UBERON:0000914!7.61e-11!83;UBERON:0002329!7.61e-11!83;UBERON:0003077!7.61e-11!83;UBERON:0003059!7.61e-11!83;UBERON:0007282!7.61e-11!83;UBERON:0009618!7.61e-11!83;UBERON:0007285!7.61e-11!83;UBERON:0002426!4.89e-09!1;UBERON:0003831!4.89e-09!1;UBERON:0003898!4.89e-09!1;UBERON:0004830!4.89e-09!1;UBERON:0001774!4.89e-09!1;UBERON:0003830!4.89e-09!1;UBERON:0005175!4.89e-09!1;UBERON:0003897!4.89e-09!1;UBERON:0001103!4.89e-09!1;UBERON:0010084!4.89e-09!1;UBERON:0002146!1.13e-08!1;UBERON:0005623!1.13e-08!1;UBERON:0000490!5.41e-08!138|ontology_enrichment_uberon_v019=UBERON:0001134;3.44e-49;16!UBERON:0002036;3.44e-49;16!UBERON:0002385;8.66e-25;31!UBERON:0001015;8.66e-25;31!UBERON:0000383;8.66e-25;31!UBERON:0002426;3.67e-23;1!UBERON:0003831;3.67e-23;1!UBERON:0003898;3.67e-23;1!UBERON:0004830;3.67e-23;1!UBERON:0003830;3.67e-23;1!UBERON:0005175;3.67e-23;1!UBERON:0001774;3.67e-23;1!UBERON:0001103;3.67e-23;1!UBERON:0005090;2.74e-12;2!UBERON:0001630;2.74e-12;2!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0002204;7.75e-08;70|ontology_enrichment_uberon_v019_2=UBERON:0002426,4.10e-23,1;UBERON:0003831,4.10e-23,1;UBERON:0003898,4.10e-23,1;UBERON:0004830,4.10e-23,1;UBERON:0003830,4.10e-23,1;UBERON:0005175,4.10e-23,1;UBERON:0001774,4.10e-23,1;UBERON:0001103,4.10e-23,1;UBERON:0010084,4.10e-23,1;UBERON:0001134,8.10e-13,62;UBERON:0002036,8.10e-13,62;UBERON:0003082,8.10e-13,62;UBERON:0002385,2.03e-12,64;UBERON:0001015,2.03e-12,64;UBERON:0000383,2.03e-12,64;UBERON:0005090,2.90e-12,2;UBERON:0001630,2.90e-12,2;UBERON:0002329,3.41e-11,71;UBERON:0003059,3.41e-11,71;UBERON:0007282,3.41e-11,71;UBERON:0004290,3.41e-11,71;UBERON:0009618,3.41e-11,71;UBERON:0003077,4.88e-11,72;UBERON:0007285,4.88e-11,72;UBERON:0007524,6.91e-11,73;UBERON:0007503,3.46e-10,78;UBERON:0000486,1.43e-09,83;UBERON:0005256,1.06e-08,122;UBERON:0001723,1.21e-08,3;UBERON:0001033,1.21e-08,3;UBERON:0010056,1.21e-08,3;UBERON:0000490,3.94e-07,148|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,5.14715135716284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03008508413456,0.462145851343933,1.99554777143968,1.37836572484531,0.107420244868274,0.145016693914229,0.426133137080504,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_at_chr1:203052309..203052311,- | |||
|id=chr1:203052309..203052311,- | |||
|ontology_enrichment_celltype=CL:0000188!4.27e-52!9;CL:0000594!2.89e-22!3;CL:0002575!4.00e-16!2;CL:0000183!4.60e-11!59;CL:0000680!3.22e-09!57;CL:0000056!3.22e-09!57;CL:0000355!3.22e-09!57;CL:0000187!8.54e-08!54;CL:0000669!5.73e-07!5;CL:0000393!6.61e-07!60;CL:0000211!6.61e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.94e-39;9!CL:0002575;1.48e-12;2!CL:0000669;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.42e-39,9;CL:0002575,1.48e-12,2;CL:0000669,6.50e-07,4;CL:0000187,8.59e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.57e-15!61;UBERON:0002036!1.57e-15!61;UBERON:0003082!1.57e-15!61;UBERON:0002385!5.71e-15!63;UBERON:0001015!5.71e-15!63;UBERON:0000383!5.71e-15!63;UBERON:0004290!2.94e-13!70;UBERON:0000486!5.17e-13!82;UBERON:0001723!4.43e-11!3;UBERON:0001033!4.43e-11!3;UBERON:0010056!4.43e-11!3;UBERON:0000914!7.61e-11!83;UBERON:0002329!7.61e-11!83;UBERON:0003077!7.61e-11!83;UBERON:0003059!7.61e-11!83;UBERON:0007282!7.61e-11!83;UBERON:0009618!7.61e-11!83;UBERON:0007285!7.61e-11!83;UBERON:0002426!4.89e-09!1;UBERON:0003831!4.89e-09!1;UBERON:0003898!4.89e-09!1;UBERON:0004830!4.89e-09!1;UBERON:0001774!4.89e-09!1;UBERON:0003830!4.89e-09!1;UBERON:0005175!4.89e-09!1;UBERON:0003897!4.89e-09!1;UBERON:0001103!4.89e-09!1;UBERON:0010084!4.89e-09!1;UBERON:0002146!1.13e-08!1;UBERON:0005623!1.13e-08!1;UBERON:0000490!5.41e-08!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.44e-49;16!UBERON:0002036;3.44e-49;16!UBERON:0002385;8.66e-25;31!UBERON:0001015;8.66e-25;31!UBERON:0000383;8.66e-25;31!UBERON:0002426;3.67e-23;1!UBERON:0003831;3.67e-23;1!UBERON:0003898;3.67e-23;1!UBERON:0004830;3.67e-23;1!UBERON:0003830;3.67e-23;1!UBERON:0005175;3.67e-23;1!UBERON:0001774;3.67e-23;1!UBERON:0001103;3.67e-23;1!UBERON:0005090;2.74e-12;2!UBERON:0001630;2.74e-12;2!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0002204;7.75e-08;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,4.10e-23,1;UBERON:0003831,4.10e-23,1;UBERON:0003898,4.10e-23,1;UBERON:0004830,4.10e-23,1;UBERON:0003830,4.10e-23,1;UBERON:0005175,4.10e-23,1;UBERON:0001774,4.10e-23,1;UBERON:0001103,4.10e-23,1;UBERON:0010084,4.10e-23,1;UBERON:0001134,8.10e-13,62;UBERON:0002036,8.10e-13,62;UBERON:0003082,8.10e-13,62;UBERON:0002385,2.03e-12,64;UBERON:0001015,2.03e-12,64;UBERON:0000383,2.03e-12,64;UBERON:0005090,2.90e-12,2;UBERON:0001630,2.90e-12,2;UBERON:0002329,3.41e-11,71;UBERON:0003059,3.41e-11,71;UBERON:0007282,3.41e-11,71;UBERON:0004290,3.41e-11,71;UBERON:0009618,3.41e-11,71;UBERON:0003077,4.88e-11,72;UBERON:0007285,4.88e-11,72;UBERON:0007524,6.91e-11,73;UBERON:0007503,3.46e-10,78;UBERON:0000486,1.43e-09,83;UBERON:0005256,1.06e-08,122;UBERON:0001723,1.21e-08,3;UBERON:0001033,1.21e-08,3;UBERON:0010056,1.21e-08,3;UBERON:0000490,3.94e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,5.14715135716284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03008508413456,0.462145851343933,1.99554777143968,1.37836572484531,0.107420244868274,0.145016693914229,0.426133137080504,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0.435433495793923,1.71116650542641,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:203052309..203052311,- | |||
}} |
Revision as of 02:52, 12 September 2013
Short description: | p@chr1:203052309..203052311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:203052309..203052311, - |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.42e-39 | 9 |
central nervous system pericyte | 1.48e-12 | 2 |
pericyte cell | 6.50e-07 | 4 |
muscle cell | 8.59e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 4.10e-23 | 1 |
respiratory system muscle | 4.10e-23 | 1 |
skeletal muscle of trunk | 4.10e-23 | 1 |
respiratory system skeletal muscle | 4.10e-23 | 1 |
thoracic segment muscle | 4.10e-23 | 1 |
chest organ | 4.10e-23 | 1 |
muscle of trunk | 4.10e-23 | 1 |
diaphragm | 4.10e-23 | 1 |
future diaphragm | 4.10e-23 | 1 |
skeletal muscle tissue | 8.10e-13 | 62 |
striated muscle tissue | 8.10e-13 | 62 |
myotome | 8.10e-13 | 62 |
muscle tissue | 2.03e-12 | 64 |
musculature | 2.03e-12 | 64 |
musculature of body | 2.03e-12 | 64 |
muscle structure | 2.90e-12 | 2 |
muscle organ | 2.90e-12 | 2 |
somite | 3.41e-11 | 71 |
presomitic mesoderm | 3.41e-11 | 71 |
presumptive segmental plate | 3.41e-11 | 71 |
dermomyotome | 3.41e-11 | 71 |
trunk paraxial mesoderm | 3.41e-11 | 71 |
paraxial mesoderm | 4.88e-11 | 72 |
presumptive paraxial mesoderm | 4.88e-11 | 72 |
dense mesenchyme tissue | 6.91e-11 | 73 |
epithelial vesicle | 3.46e-10 | 78 |
multilaminar epithelium | 1.43e-09 | 83 |
trunk mesenchyme | 1.06e-08 | 122 |
tongue | 1.21e-08 | 3 |
gustatory system | 1.21e-08 | 3 |
future tongue | 1.21e-08 | 3 |
unilaminar epithelium | 3.94e-07 | 148 |
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