FFCP PHASE1:Hg19::chr1:208417694..208417709,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9100 | |||
|TSSclassifier=S | |||
|UniProt=O75051 | |||
|association_with_transcript=-29bp_to_ENST00000367033,NM_025179,uc001hgz.2_5end | |||
|description=CAGE_peak_4_at_PLXNA2_5end | |||
|id=chr1:208417694..208417709,- | |||
|ontology_enrichment_celltype=CL:0002139!5.51e-18!24;CL:0000115!3.36e-16!35;CL:0002078!5.69e-15!44;CL:0000071!4.79e-14!18;CL:0002546!4.79e-14!18;CL:0000213!5.05e-14!57;CL:0000215!5.05e-14!57;CL:0000220!4.38e-12!246;CL:0002321!1.43e-11!248;CL:0000222!3.20e-11!119;CL:0000076!6.91e-11!62;CL:1000413!5.84e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.25e-33;24!CL:0000115;5.53e-28;36!CL:0000071;6.02e-26;18!CL:0002078;6.85e-18;45!CL:1000413;4.28e-14;9!CL:0000213;5.16e-13;58!CL:0000215;5.16e-13;58!CL:0002544;6.59e-10;6!CL:0002543;1.56e-09;6!CL:0002138;3.27e-09;6!CL:0002188;2.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.63e-34,36;CL:0002139,8.95e-34,24;CL:0002078,2.05e-26,45;CL:0000071,5.07e-26,18;CL:0002546,5.07e-26,18;CL:0000213,1.15e-20,58;CL:0000215,1.15e-20,58;CL:1000413,4.31e-14,9;CL:0000222,5.29e-13,121;CL:0002321,6.17e-13,250;CL:0002544,6.53e-10,6;CL:0002543,1.29e-09,6;CL:0005020,2.80e-09,6;CL:0002138,2.80e-09,6;CL:0005022,2.80e-09,6;CL:0000076,2.43e-08,63;CL:0002188,2.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;6.02e-26;18!CL:0005022;3.27e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.33e-17!241;UBERON:0000025!1.29e-16!194;UBERON:0000119!2.27e-16!312;UBERON:0000483!5.32e-16!309;UBERON:0001986!4.79e-14!18;UBERON:0004638!4.79e-14!18;UBERON:0004852!4.79e-14!18;UBERON:0000477!1.68e-13!286;UBERON:0000467!1.57e-12!625;UBERON:0000055!2.15e-12!69;UBERON:0000480!2.56e-12!626;UBERON:0006914!3.25e-12!25;UBERON:0001017!3.73e-12!82;UBERON:0000487!3.93e-12!22;UBERON:0002049!4.43e-12!79;UBERON:0007798!4.43e-12!79;UBERON:0000468!6.79e-12!659;UBERON:0001049!2.10e-11!57;UBERON:0005068!2.10e-11!57;UBERON:0006241!2.10e-11!57;UBERON:0007135!2.10e-11!57;UBERON:0005743!5.19e-11!86;UBERON:0000955!1.34e-10!69;UBERON:0006238!1.34e-10!69;UBERON:0001981!3.31e-10!60;UBERON:0007500!3.31e-10!60;UBERON:0004537!3.31e-10!60;UBERON:0006965!3.31e-10!60;UBERON:0002616!3.35e-10!59;UBERON:0000073!5.11e-10!94;UBERON:0001016!5.11e-10!94;UBERON:0004872!1.73e-09!84;UBERON:0001009!3.55e-09!113;UBERON:0000475!8.46e-09!365;UBERON:0004535!1.35e-08!110;UBERON:0003075!1.93e-08!86;UBERON:0007284!1.93e-08!86;UBERON:0002050!4.58e-08!605;UBERON:0005423!4.58e-08!605;UBERON:0000922!5.35e-08!612;UBERON:0000923!5.58e-08!604;UBERON:0005291!5.58e-08!604;UBERON:0006598!5.58e-08!604;UBERON:0002532!5.58e-08!604;UBERON:0003915!5.84e-08!9;UBERON:0004700!5.84e-08!9;UBERON:0001917!5.84e-08!9;UBERON:0004121!6.40e-08!169;UBERON:0001869!1.06e-07!32;UBERON:0000033!1.33e-07!123;UBERON:0000956!2.30e-07!25;UBERON:0000203!2.30e-07!25;UBERON:0000153!2.61e-07!129;UBERON:0007811!2.61e-07!129;UBERON:0003080!2.77e-07!42;UBERON:0001893!3.26e-07!34;UBERON:0000481!3.84e-07!347;UBERON:0002346!4.15e-07!90;UBERON:0002780!4.21e-07!41;UBERON:0001890!4.21e-07!41;UBERON:0006240!4.21e-07!41;UBERON:0002020!4.34e-07!34;UBERON:0003528!4.34e-07!34;UBERON:0000924!5.16e-07!173;UBERON:0006601!5.16e-07!173;UBERON:0002791!5.95e-07!33;UBERON:0001950!6.91e-07!20;UBERON:0003914!7.09e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.02e-26;18!UBERON:0001986;6.02e-26;18!UBERON:0004852;6.02e-26;18!UBERON:0000487;5.22e-22;22!UBERON:0006914;2.39e-20;25!UBERON:0000490;1.23e-14;33!UBERON:0003915;4.28e-14;9!UBERON:0004700;4.28e-14;9!UBERON:0001917;4.28e-14;9!UBERON:0000055;1.31e-09;65!UBERON:0007500;6.47e-08;56!UBERON:0001981;6.47e-08;56!UBERON:0004537;6.47e-08;56!UBERON:0002037;4.80e-07;6!UBERON:0001950;8.22e-07;20!UBERON:0000956;9.86e-07;25!UBERON:0000203;9.86e-07;25 | |||
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| |||
|short_description=p4@PLXNA2 | |||
}} | |||
Revision as of 03:19, 12 September 2013
| Short description: | p4@PLXNA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_PLXNA2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -29bp_to_ENST00000367033, NM_025179, uc001hgz.2_5end |
| EntrezGene: | PLXNA2 |
| HGNC: | 9100 |
| UniProt: | O75051 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell | 3.63e-34 | 36 |
| endothelial cell of vascular tree | 8.95e-34 | 24 |
| meso-epithelial cell | 2.05e-26 | 45 |
| blood vessel endothelial cell | 5.07e-26 | 18 |
| embryonic blood vessel endothelial progenitor cell | 5.07e-26 | 18 |
| lining cell | 1.15e-20 | 58 |
| barrier cell | 1.15e-20 | 58 |
| endothelial cell of artery | 4.31e-14 | 9 |
| mesodermal cell | 5.29e-13 | 121 |
| embryonic cell | 6.17e-13 | 250 |
| aortic endothelial cell | 6.53e-10 | 6 |
| vein endothelial cell | 1.29e-09 | 6 |
| lymphangioblast | 2.80e-09 | 6 |
| endothelial cell of lymphatic vessel | 2.80e-09 | 6 |
| vascular lymphangioblast | 2.80e-09 | 6 |
| squamous epithelial cell | 2.43e-08 | 63 |
| glomerular endothelial cell | 2.34e-07 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| blood vessel endothelium | 5.07e-26 | 18 |
| endothelium | 5.07e-26 | 18 |
| cardiovascular system endothelium | 5.07e-26 | 18 |
| simple squamous epithelium | 3.28e-22 | 22 |
| squamous epithelium | 2.25e-20 | 25 |
| vessel | 3.57e-16 | 68 |
| endothelial tube | 4.31e-14 | 9 |
| arterial system endothelium | 4.31e-14 | 9 |
| endothelium of artery | 4.31e-14 | 9 |
| anatomical conduit | 5.33e-14 | 240 |
| vasculature | 1.56e-13 | 78 |
| vascular system | 1.56e-13 | 78 |
| tube | 1.86e-12 | 192 |
| epithelial tube open at both ends | 2.78e-12 | 59 |
| blood vessel | 2.78e-12 | 59 |
| blood vasculature | 2.78e-12 | 59 |
| vascular cord | 2.78e-12 | 59 |
| cell layer | 5.60e-11 | 309 |
| epithelium | 2.45e-10 | 306 |
| splanchnic layer of lateral plate mesoderm | 9.37e-10 | 83 |
| cardiovascular system | 3.52e-09 | 109 |
| circulatory system | 1.22e-08 | 112 |
| epithelial tube | 6.00e-08 | 117 |
| central nervous system | 6.66e-08 | 81 |
| nervous system | 2.15e-07 | 89 |
| brain | 2.64e-07 | 68 |
| future brain | 2.64e-07 | 68 |
| cerebellum | 4.28e-07 | 6 |
| rhombic lip | 4.28e-07 | 6 |
| regional part of nervous system | 4.49e-07 | 53 |
| regional part of brain | 4.49e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
