FFCP PHASE1:Hg19::chr1:246357031..246357043,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64754|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15513|TSSclassifier=S|UniProt=A8MXR1|association_with_transcript=-2bp_to_ENST00000391836_5end|coexpression_cluster_id=C110|description=CAGE_peak_8_at_SMYD3_5end|id=chr1:246357031..246357043,-|ontology_enrichment_celltype=CL:0000763!9.76e-08!112;CL:0000049!9.76e-08!112;CL:0002032!8.70e-07!165;CL:0000837!8.70e-07!165|ontology_enrichment_celltype_v019=CL:0000763;7.12e-08;100|ontology_enrichment_celltype_v019_2=CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!4.68e-40!8;DOID:8692!2.89e-27!31;DOID:1240!2.30e-21!39;DOID:2531!5.61e-16!51;DOID:0060083!5.61e-16!51;DOID:8552!3.71e-10!1;DOID:4235!5.30e-10!1;DOID:0050686!3.14e-07!137|ontology_enrichment_disease_v019=DOID:1036;3.90e-88;8!DOID:8692;2.82e-41;31!DOID:1240;2.63e-28;39!DOID:2531;1.08e-14;51!DOID:0060083;1.08e-14;51|ontology_enrichment_disease_v019_2=DOID:1036,3.90e-88,8;DOID:8692,1.29e-44,31;DOID:1240,1.45e-35,39;DOID:2531,2.68e-27,51;DOID:0060083,2.68e-27,51;DOID:0050686,2.97e-10,137|ontology_enrichment_uberon=UBERON:0002581!1.17e-09!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,0,1.70338495076131,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35470384592537,0.498635045700469,3.83512623049207,2.54881294613061,2.85296697858933,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37343711643257,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@SMYD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64754 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15513 | |||
|TSSclassifier=S | |||
|UniProt=A8MXR1 | |||
|association_with_transcript=-2bp_to_ENST00000391836_5end | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_8_at_SMYD3_5end | |||
|id=chr1:246357031..246357043,- | |||
|ontology_enrichment_celltype=CL:0000763!9.76e-08!112;CL:0000049!9.76e-08!112;CL:0002032!8.70e-07!165;CL:0000837!8.70e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000763;7.12e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.68e-40!8;DOID:8692!2.89e-27!31;DOID:1240!2.30e-21!39;DOID:2531!5.61e-16!51;DOID:0060083!5.61e-16!51;DOID:8552!3.71e-10!1;DOID:4235!5.30e-10!1;DOID:0050686!3.14e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.90e-88;8!DOID:8692;2.82e-41;31!DOID:1240;2.63e-28;39!DOID:2531;1.08e-14;51!DOID:0060083;1.08e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.90e-88,8;DOID:8692,1.29e-44,31;DOID:1240,1.45e-35,39;DOID:2531,2.68e-27,51;DOID:0060083,2.68e-27,51;DOID:0050686,2.97e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0002581!1.17e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p8@SMYD3 | |||
}} |
Revision as of 04:43, 12 September 2013
Short description: | p8@SMYD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SMYD3_5end |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | -2bp_to_ENST00000391836_5end |
EntrezGene: | SMYD3 |
HGNC: | 15513 |
UniProt: | A8MXR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.90e-88 | 8 |
myeloid leukemia | 1.29e-44 | 31 |
leukemia | 1.45e-35 | 39 |
hematologic cancer | 2.68e-27 | 51 |
immune system cancer | 2.68e-27 | 51 |
organ system cancer | 2.97e-10 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.