FFCP PHASE1:Hg19::chr1:92951607..92951661,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2672|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4237|TSSclassifier=S|UniProt=Q99684,B3KVN4|association_with_transcript=0bp_to_ENST00000427103,NM_001127216,uc001dov.3_5end|description=CAGE_peak_1_at_GFI1_5end|id=chr1:92951607..92951661,-|ontology_enrichment_celltype=CL:0000037!4.42e-29!172;CL:0000566!4.42e-29!172;CL:0000988!3.82e-28!182;CL:0002032!3.70e-25!165;CL:0000837!3.70e-25!165;CL:0000084!1.82e-16!25;CL:0000827!1.82e-16!25;CL:0000738!7.03e-16!140;CL:0000542!8.22e-16!53;CL:0000051!8.22e-16!53;CL:0000838!2.97e-15!52;CL:0000791!1.68e-13!18;CL:0000789!1.68e-13!18;CL:0002420!1.68e-13!18;CL:0002419!1.68e-13!18;CL:0000790!1.68e-13!18;CL:0002031!1.14e-12!124;CL:0002087!9.99e-12!119;CL:0000763!8.74e-11!112;CL:0000049!8.74e-11!112;CL:0000625!5.74e-10!11|ontology_enrichment_celltype_v019=CL:0000084;1.06e-22;25!CL:0000791;2.84e-17;18!CL:0000789;2.84e-17;18!CL:0002419;2.84e-17;18!CL:0000625;3.05e-15;11!CL:0000542;6.78e-12;53!CL:0000097;1.13e-08;5!CL:0000988;5.23e-07;177|ontology_enrichment_celltype_v019_2=CL:0000988,5.03e-39,177;CL:0000037,1.76e-38,168;CL:0002032,1.54e-32,161;CL:0000837,1.54e-32,161;CL:0000084,1.32e-22,25;CL:0000827,1.32e-22,25;CL:0000542,1.42e-22,53;CL:0000051,1.42e-22,53;CL:0000838,1.09e-21,52;CL:0000738,3.22e-19,136;CL:0000791,3.03e-17,18;CL:0000789,3.03e-17,18;CL:0002420,3.03e-17,18;CL:0002419,3.03e-17,18;CL:0000790,3.03e-17,18;CL:0000625,2.96e-15,11;CL:0002031,1.08e-13,120;CL:0002087,2.38e-13,115;CL:0000763,2.52e-12,108;CL:0000049,2.52e-12,108;CL:0000097,1.12e-08,5;CL:0002028,1.12e-08,5;CL:0000134,4.85e-08,354;CL:0002320,1.72e-07,361|ontology_enrichment_development_v019=CL:0000790;2.84e-17;18!CL:0000051;6.78e-12;53|ontology_enrichment_disease=DOID:2531!2.63e-20!51;DOID:0060083!2.63e-20!51;DOID:1240!7.82e-20!39;DOID:8692!3.52e-16!31|ontology_enrichment_disease_v019=DOID:8692;2.94e-26;31!DOID:1240;8.63e-26;39!DOID:2531;1.38e-18;51!DOID:0060083;1.38e-18;51|ontology_enrichment_disease_v019_2=DOID:1240,5.27e-34,39;DOID:2531,1.93e-30,51;DOID:0060083,1.93e-30,51;DOID:8692,1.19e-27,31|ontology_enrichment_uberon=UBERON:0000178!1.60e-11!15;UBERON:0000179!1.60e-11!15;UBERON:0000463!1.60e-11!15;UBERON:0007023!2.76e-08!115;UBERON:0002390!1.59e-07!102;UBERON:0003061!1.59e-07!102|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-17;15!UBERON:0000179;1.09e-17;15!UBERON:0000463;1.09e-17;15!UBERON:0002390;4.60e-13;32!UBERON:0002193;1.26e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.60e-18,15;UBERON:0000179,8.60e-18,15;UBERON:0000463,8.60e-18,15;UBERON:0002390,1.15e-09,98;UBERON:0003061,1.15e-09,98;UBERON:0002193,3.52e-09,108;UBERON:0004177,8.24e-07,7;UBERON:0005057,8.24e-07,7;UBERON:0002384,9.29e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,6.49513948857586,9.03106483949403,7.47752422479953,2.36018566109342,7.29275856384704,1.85779347979291,0,0,0,0,0.426507697462265,10.2760153767197,1.10799081706375,1.60435557976113,2.60413044859022,0.671746422719773,1.6194683300949,0.77272670290256,0.290796477559129,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0,0.612167784741805,0,0,0,0,0,0,1.13477044938228,0,0.502497330513487,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,10.0085952214529,0.983548850569165,2.35806457649499,2.46721798799411,2.34061093546949,3.58514493296949,3.31413464014313,1.94826728407911,18.8283672135943,0.589211814949674,1.32920336750173,1.62482318259009,14.2181364895499,17.4279525730237,23.350182453722,24.3188015651547,15.3595635439578,3.55887751588945,4.28065324943541,7.31748666634838,11.4442436124542,3.06576394881537,2.74901956386104,6.32549230048757,9.875527844047,10.4173352617027,11.4054245333805,7.07703059665532,7.16725022464743,9.99445812418767,10.4181990899367,8.21127996921047,7.86266298576456,10.6976078313403,5.50332734754636,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0.649094787309367,0.522389211897802,0.132957960518865,1.90792499444274,4.0039643754609,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,1.06748995729705,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,10.5951143859516,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.594524649154913,0,0,0,0,0,0,3.4486426652716,61.0175647711657,38.9776857216651,40.6418268635831,59.7126710106777,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,5.15591662370225,6.10795356625974,6.90008239550455,9.75407075726088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,2.15714200818617,5.33637789017222,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,1.03850885836724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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4237 | |||
|TSSclassifier=S | |||
|UniProt=Q99684,B3KVN4 | |||
|association_with_transcript=0bp_to_ENST00000427103,NM_001127216,uc001dov.3_5end | |||
|description=CAGE_peak_1_at_GFI1_5end | |||
|id=chr1:92951607..92951661,- | |||
|ontology_enrichment_celltype=CL:0000037!4.42e-29!172;CL:0000566!4.42e-29!172;CL:0000988!3.82e-28!182;CL:0002032!3.70e-25!165;CL:0000837!3.70e-25!165;CL:0000084!1.82e-16!25;CL:0000827!1.82e-16!25;CL:0000738!7.03e-16!140;CL:0000542!8.22e-16!53;CL:0000051!8.22e-16!53;CL:0000838!2.97e-15!52;CL:0000791!1.68e-13!18;CL:0000789!1.68e-13!18;CL:0002420!1.68e-13!18;CL:0002419!1.68e-13!18;CL:0000790!1.68e-13!18;CL:0002031!1.14e-12!124;CL:0002087!9.99e-12!119;CL:0000763!8.74e-11!112;CL:0000049!8.74e-11!112;CL:0000625!5.74e-10!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.06e-22;25!CL:0000791;2.84e-17;18!CL:0000789;2.84e-17;18!CL:0002419;2.84e-17;18!CL:0000625;3.05e-15;11!CL:0000542;6.78e-12;53!CL:0000097;1.13e-08;5!CL:0000988;5.23e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.03e-39,177;CL:0000037,1.76e-38,168;CL:0002032,1.54e-32,161;CL:0000837,1.54e-32,161;CL:0000084,1.32e-22,25;CL:0000827,1.32e-22,25;CL:0000542,1.42e-22,53;CL:0000051,1.42e-22,53;CL:0000838,1.09e-21,52;CL:0000738,3.22e-19,136;CL:0000791,3.03e-17,18;CL:0000789,3.03e-17,18;CL:0002420,3.03e-17,18;CL:0002419,3.03e-17,18;CL:0000790,3.03e-17,18;CL:0000625,2.96e-15,11;CL:0002031,1.08e-13,120;CL:0002087,2.38e-13,115;CL:0000763,2.52e-12,108;CL:0000049,2.52e-12,108;CL:0000097,1.12e-08,5;CL:0002028,1.12e-08,5;CL:0000134,4.85e-08,354;CL:0002320,1.72e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;2.84e-17;18!CL:0000051;6.78e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!2.63e-20!51;DOID:0060083!2.63e-20!51;DOID:1240!7.82e-20!39;DOID:8692!3.52e-16!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.94e-26;31!DOID:1240;8.63e-26;39!DOID:2531;1.38e-18;51!DOID:0060083;1.38e-18;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.27e-34,39;DOID:2531,1.93e-30,51;DOID:0060083,1.93e-30,51;DOID:8692,1.19e-27,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.60e-11!15;UBERON:0000179!1.60e-11!15;UBERON:0000463!1.60e-11!15;UBERON:0007023!2.76e-08!115;UBERON:0002390!1.59e-07!102;UBERON:0003061!1.59e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-17;15!UBERON:0000179;1.09e-17;15!UBERON:0000463;1.09e-17;15!UBERON:0002390;4.60e-13;32!UBERON:0002193;1.26e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.60e-18,15;UBERON:0000179,8.60e-18,15;UBERON:0000463,8.60e-18,15;UBERON:0002390,1.15e-09,98;UBERON:0003061,1.15e-09,98;UBERON:0002193,3.52e-09,108;UBERON:0004177,8.24e-07,7;UBERON:0005057,8.24e-07,7;UBERON:0002384,9.29e-07,371 | |||
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| |||
|short_description=p1@GFI1 | |||
}} |
Revision as of 07:13, 12 September 2013
Short description: | p1@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GFI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427103, NM_001127216, uc001dov.3_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684B3KVN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.03e-39 | 177 |
hematopoietic stem cell | 1.76e-38 | 168 |
hematopoietic oligopotent progenitor cell | 1.54e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-32 | 161 |
T cell | 1.32e-22 | 25 |
pro-T cell | 1.32e-22 | 25 |
lymphocyte | 1.42e-22 | 53 |
common lymphoid progenitor | 1.42e-22 | 53 |
lymphoid lineage restricted progenitor cell | 1.09e-21 | 52 |
leukocyte | 3.22e-19 | 136 |
mature alpha-beta T cell | 3.03e-17 | 18 |
alpha-beta T cell | 3.03e-17 | 18 |
immature T cell | 3.03e-17 | 18 |
mature T cell | 3.03e-17 | 18 |
immature alpha-beta T cell | 3.03e-17 | 18 |
CD8-positive, alpha-beta T cell | 2.96e-15 | 11 |
hematopoietic lineage restricted progenitor cell | 1.08e-13 | 120 |
nongranular leukocyte | 2.38e-13 | 115 |
myeloid cell | 2.52e-12 | 108 |
common myeloid progenitor | 2.52e-12 | 108 |
mast cell | 1.12e-08 | 5 |
basophil mast progenitor cell | 1.12e-08 | 5 |
mesenchymal cell | 4.85e-08 | 354 |
connective tissue cell | 1.72e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 8.60e-18 | 15 |
haemolymphatic fluid | 8.60e-18 | 15 |
organism substance | 8.60e-18 | 15 |
hematopoietic system | 1.15e-09 | 98 |
blood island | 1.15e-09 | 98 |
hemolymphoid system | 3.52e-09 | 108 |
hemopoietic organ | 8.24e-07 | 7 |
immune organ | 8.24e-07 | 7 |
connective tissue | 9.29e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.27e-34 | 39 |
hematologic cancer | 1.93e-30 | 51 |
immune system cancer | 1.93e-30 | 51 |
myeloid leukemia | 1.19e-27 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.