FFCP PHASE1:Hg19::chr20:61200599..61200621,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:61200599..61200621,-|id=chr20:61200599..61200621,-|ontology_enrichment_celltype=CL:0000763!1.06e-27!112;CL:0000049!1.06e-27!112;CL:0000766!2.55e-25!76;CL:0002032!3.50e-23!165;CL:0000837!3.50e-23!165;CL:0000037!6.06e-23!172;CL:0000566!6.06e-23!172;CL:0000988!1.79e-20!182;CL:0002057!4.72e-20!42;CL:0000860!8.60e-20!45;CL:0000738!1.45e-19!140;CL:0002009!3.09e-19!65;CL:0000839!3.67e-19!70;CL:0000557!1.11e-18!71;CL:0002194!1.14e-17!63;CL:0000576!1.14e-17!63;CL:0000040!1.14e-17!63;CL:0000559!1.14e-17!63;CL:0002031!5.77e-16!124;CL:0002087!8.43e-14!119;CL:0000094!5.00e-12!8;CL:0000081!3.57e-08!11|ontology_enrichment_celltype_v019=CL:0000775;1.48e-17;3!CL:0000094;1.64e-17;8!CL:0000081;1.15e-12;11!CL:0000771;2.28e-12;2!CL:0000473;4.87e-11;39!CL:0000234;4.87e-11;39!CL:0000860;5.48e-09;33!CL:0002057;5.48e-09;33!CL:0000766;5.39e-08;69!CL:0002127;4.08e-07;1!CL:0000911;4.08e-07;1!CL:0000814;4.08e-07;1|ontology_enrichment_celltype_v019_2=CL:0000775,1.41e-17,3;CL:0000094,1.54e-17,8;CL:0000766,3.11e-15,72;CL:0000081,1.10e-12,11;CL:0000771,2.16e-12,2;CL:0000763,7.45e-12,108;CL:0000049,7.45e-12,108;CL:0000473,4.64e-11,48;CL:0000234,4.64e-11,48;CL:0002032,7.88e-09,161;CL:0000837,7.88e-09,161;CL:0000738,9.11e-09,136;CL:0000860,1.34e-08,42;CL:0002057,1.34e-08,42;CL:0002194,1.93e-08,59;CL:0000576,1.93e-08,59;CL:0000040,1.93e-08,59;CL:0000559,1.93e-08,59;CL:0000037,2.74e-08,168;CL:0002009,4.19e-08,61;CL:0000988,1.17e-07,177;CL:0000839,2.37e-07,66;CL:0000557,3.25e-07,67;CL:0002127,4.09e-07,1;CL:0000914,4.09e-07,1;CL:0000911,4.09e-07,1;CL:0000814,4.09e-07,1;CL:0002042,4.09e-07,1;CL:0002039,4.09e-07,1;CL:0002040,4.09e-07,1;CL:0002041,4.09e-07,1|ontology_enrichment_development_v019=CL:0002057;2.23e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.14e-21!102;UBERON:0003061!2.14e-21!102;UBERON:0002193!4.56e-18!112;UBERON:0002371!3.10e-15!80;UBERON:0002405!1.50e-14!115;UBERON:0001474!1.97e-14!86;UBERON:0004765!1.39e-10!101;UBERON:0001434!1.39e-10!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.92e-10,98;UBERON:0003061,3.92e-10,98;UBERON:0002193,6.70e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,1.10926203050036,0.232401601740905,0.142169232487422,0,0.553995408531877,1.40381113229099,0.651032612147555,0,0,0,0.581592955118259,0.755751887377619,1.4555043671269,1.62700325833979,0.411167888021826,1.54853185447552,1.43846196161075,1.7931249457037,0.945928919554341,1.03423704220986,0.645484683583826,0,1.31769637679823,0.272906150057846,0.674170453335254,0.918251677112708,0.641858054152187,0,0.989553900560148,0.997318288108159,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,0.75374599577023,0,1.73751075764093,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63802985597466,0.445893486866185,0,0,0,1.16426079513703,2.03443756959773,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,16.588601311042,0,0.215627574859517,0.256686072559497,0,0,0,0,0,7.49007023947182,2.99161459204025,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.288666338176536,0,0,0.282431402330337,0,0,0.886860307073351,0,1.01489521846434,1.52927441428475,1.70894156152249,0.238231775457789,0,0,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,1.90506224451495,0.324621940274555,0.280797178113459,0,1.09675927041116,0,0,0,0,0.425846237690326,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0.99921590399346,0,0.37428108081644,0,0,0,0,0,0.296964680832639,0,0,0,0.445234820091624,6.9217627175239,0,0,0,0,0,0.123084805461069,0,1.3480252672099,3.04335996948536,0,0,0,0,0,0.0927680981618513,0,0,0.087459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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:61200599..61200621,- | |||
|id=chr20:61200599..61200621,- | |||
|ontology_enrichment_celltype=CL:0000763!1.06e-27!112;CL:0000049!1.06e-27!112;CL:0000766!2.55e-25!76;CL:0002032!3.50e-23!165;CL:0000837!3.50e-23!165;CL:0000037!6.06e-23!172;CL:0000566!6.06e-23!172;CL:0000988!1.79e-20!182;CL:0002057!4.72e-20!42;CL:0000860!8.60e-20!45;CL:0000738!1.45e-19!140;CL:0002009!3.09e-19!65;CL:0000839!3.67e-19!70;CL:0000557!1.11e-18!71;CL:0002194!1.14e-17!63;CL:0000576!1.14e-17!63;CL:0000040!1.14e-17!63;CL:0000559!1.14e-17!63;CL:0002031!5.77e-16!124;CL:0002087!8.43e-14!119;CL:0000094!5.00e-12!8;CL:0000081!3.57e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.48e-17;3!CL:0000094;1.64e-17;8!CL:0000081;1.15e-12;11!CL:0000771;2.28e-12;2!CL:0000473;4.87e-11;39!CL:0000234;4.87e-11;39!CL:0000860;5.48e-09;33!CL:0002057;5.48e-09;33!CL:0000766;5.39e-08;69!CL:0002127;4.08e-07;1!CL:0000911;4.08e-07;1!CL:0000814;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.41e-17,3;CL:0000094,1.54e-17,8;CL:0000766,3.11e-15,72;CL:0000081,1.10e-12,11;CL:0000771,2.16e-12,2;CL:0000763,7.45e-12,108;CL:0000049,7.45e-12,108;CL:0000473,4.64e-11,48;CL:0000234,4.64e-11,48;CL:0002032,7.88e-09,161;CL:0000837,7.88e-09,161;CL:0000738,9.11e-09,136;CL:0000860,1.34e-08,42;CL:0002057,1.34e-08,42;CL:0002194,1.93e-08,59;CL:0000576,1.93e-08,59;CL:0000040,1.93e-08,59;CL:0000559,1.93e-08,59;CL:0000037,2.74e-08,168;CL:0002009,4.19e-08,61;CL:0000988,1.17e-07,177;CL:0000839,2.37e-07,66;CL:0000557,3.25e-07,67;CL:0002127,4.09e-07,1;CL:0000914,4.09e-07,1;CL:0000911,4.09e-07,1;CL:0000814,4.09e-07,1;CL:0002042,4.09e-07,1;CL:0002039,4.09e-07,1;CL:0002040,4.09e-07,1;CL:0002041,4.09e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.14e-21!102;UBERON:0003061!2.14e-21!102;UBERON:0002193!4.56e-18!112;UBERON:0002371!3.10e-15!80;UBERON:0002405!1.50e-14!115;UBERON:0001474!1.97e-14!86;UBERON:0004765!1.39e-10!101;UBERON:0001434!1.39e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.92e-10,98;UBERON:0003061,3.92e-10,98;UBERON:0002193,6.70e-09,108 | |||
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|short_description=p@chr20:61200599..61200621,- | |||
}} |
Revision as of 09:32, 12 September 2013
Short description: | p@chr20:61200599..61200621, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:61200599..61200621, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.41e-17 | 3 |
granulocyte | 1.54e-17 | 8 |
myeloid leukocyte | 3.11e-15 | 72 |
blood cell | 1.10e-12 | 11 |
eosinophil | 2.16e-12 | 2 |
myeloid cell | 7.45e-12 | 108 |
common myeloid progenitor | 7.45e-12 | 108 |
defensive cell | 4.64e-11 | 48 |
phagocyte | 4.64e-11 | 48 |
hematopoietic oligopotent progenitor cell | 7.88e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.88e-09 | 161 |
leukocyte | 9.11e-09 | 136 |
classical monocyte | 1.34e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-08 | 42 |
monopoietic cell | 1.93e-08 | 59 |
monocyte | 1.93e-08 | 59 |
monoblast | 1.93e-08 | 59 |
promonocyte | 1.93e-08 | 59 |
hematopoietic stem cell | 2.74e-08 | 168 |
macrophage dendritic cell progenitor | 4.19e-08 | 61 |
hematopoietic cell | 1.17e-07 | 177 |
myeloid lineage restricted progenitor cell | 2.37e-07 | 66 |
granulocyte monocyte progenitor cell | 3.25e-07 | 67 |
innate effector T cell | 4.09e-07 | 1 |
immature NK T cell | 4.09e-07 | 1 |
effector T cell | 4.09e-07 | 1 |
mature NK T cell | 4.09e-07 | 1 |
immature NK T cell stage IV | 4.09e-07 | 1 |
immature NK T cell stage I | 4.09e-07 | 1 |
immature NK T cell stage II | 4.09e-07 | 1 |
immature NK T cell stage III | 4.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.92e-10 | 98 |
blood island | 3.92e-10 | 98 |
hemolymphoid system | 6.70e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.