FFCP PHASE1:Hg19::chr21:47424675..47424687,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C198|description=CAGE_peak_at_chr21:47424675..47424687,+|id=chr21:47424675..47424687,+|ontology_enrichment_celltype=CL:0000055!1.75e-32!180;CL:0000057!3.02e-20!75;CL:0000680!1.89e-12!57;CL:0000056!1.89e-12!57;CL:0000355!1.89e-12!57;CL:0000393!2.60e-12!60;CL:0000211!2.60e-12!60;CL:0000187!2.13e-11!54;CL:0002620!5.06e-11!23;CL:0000183!5.75e-11!59;CL:0000048!1.18e-10!430;CL:0000034!5.16e-10!444;CL:0000723!8.55e-10!436;CL:0000192!9.94e-09!42;CL:0000514!9.94e-09!42;CL:0000499!5.19e-08!27;CL:0002570!6.74e-08!8|ontology_enrichment_celltype_v019=CL:0002570;1.45e-14;8!CL:0002620;3.76e-13;23!CL:0000057;1.95e-09;73!CL:0000134;2.24e-09;55!CL:0000499;1.03e-08;28!CL:0000723;4.59e-08;61!CL:0002334;4.81e-08;12!CL:0002320;5.16e-08;188!CL:0000048;5.94e-08;58!CL:0000135;4.66e-07;3!CL:0000388;4.66e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,7.24e-23,76;CL:0000048,1.49e-17,427;CL:0000723,6.10e-17,433;CL:0000034,3.76e-16,441;CL:0002320,8.90e-15,361;CL:0002570,9.48e-15,8;CL:0002620,6.11e-13,23;CL:0000134,1.74e-12,354;CL:0000219,1.44e-10,386;CL:0000499,1.29e-08,28;CL:0002334,5.74e-08,12;CL:0000135,4.60e-07,3;CL:0000388,4.60e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!2.51e-07!14|ontology_enrichment_disease_v019=DOID:17;1.17e-08;5!DOID:450;1.17e-08;5!DOID:66;1.17e-08;5!DOID:423;1.17e-08;5!DOID:0080000;1.17e-08;5!DOID:11722;1.17e-08;5|ontology_enrichment_disease_v019_2=DOID:17,8.48e-09,5;DOID:450,8.48e-09,5;DOID:66,8.48e-09,5;DOID:423,8.48e-09,5;DOID:0080000,8.48e-09,5;DOID:11722,8.48e-09,5|ontology_enrichment_uberon=UBERON:0000914!3.23e-16!83;UBERON:0002329!3.23e-16!83;UBERON:0003077!3.23e-16!83;UBERON:0003059!3.23e-16!83;UBERON:0007282!3.23e-16!83;UBERON:0009618!3.23e-16!83;UBERON:0007285!3.23e-16!83;UBERON:0004290!1.51e-15!70;UBERON:0001134!2.84e-13!61;UBERON:0002036!2.84e-13!61;UBERON:0003082!2.84e-13!61;UBERON:0000486!3.38e-13!82;UBERON:0002385!4.58e-13!63;UBERON:0001015!4.58e-13!63;UBERON:0000383!4.58e-13!63;UBERON:0001013!1.14e-11!14;UBERON:0005256!1.96e-10!143;UBERON:0002199!3.33e-10!45;UBERON:0002416!3.33e-10!45;UBERON:0002100!1.29e-08!216;UBERON:0003102!1.36e-08!95;UBERON:0000475!9.21e-08!365;UBERON:0002097!1.81e-07!40|ontology_enrichment_uberon_v019=UBERON:0001013;6.62e-20;14!UBERON:0002199;1.80e-12;46!UBERON:0002416;1.80e-12;46!UBERON:0002384;2.30e-09;198!UBERON:0002072;4.56e-09;5!UBERON:0002097;4.72e-09;41!UBERON:0003102;2.81e-08;50!UBERON:0007846;4.66e-07;3!UBERON:0000043;4.66e-07;3!UBERON:0007845;4.66e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.97e-20,14;UBERON:0002199,5.87e-17,46;UBERON:0002416,5.87e-17,46;UBERON:0002384,5.83e-15,371;UBERON:0002097,1.18e-11,41;UBERON:0003102,2.31e-11,99;UBERON:0002072,3.34e-09,5;UBERON:0007524,9.35e-08,73;UBERON:0002329,3.03e-07,71;UBERON:0003059,3.03e-07,71;UBERON:0007282,3.03e-07,71;UBERON:0004290,3.03e-07,71;UBERON:0009618,3.03e-07,71;UBERON:0007846,4.60e-07,3;UBERON:0000043,4.60e-07,3;UBERON:0007845,4.60e-07,3;UBERON:0003077,4.61e-07,72;UBERON:0007285,4.61e-07,72|phase1_expression=0.908391896352783,2.35510576280081,2.39622486963151,0,0.893922188854576,1.74467704820074,2.53299878168311,3.79031924056099,2.08948502559871,0,0,0.218441372130172,0,0.618831764800233,1.65698687863958,4.70627602516243,0,1.46062018077475,3.41552959153355,0.246242116153576,1.42800483870977,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,3.2529523714611,4.01070328508712,1.88300474649071,1.5905718941022,0.973269740605272,0.0945348171640679,0.221729397462564,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,1.32409180813219,2.29469296599051,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0,0.817309515567294,1.05950199351452,4.03323147135999,0,2.18512053781224,0.570471821544449,2.39117888882882,0.23486899728753,0.971237666208789,0,1.42907919878425,1.47401180774122,0.309977343527296,4.75201142912821,2.71993622206413,0,2.87447256726495,0,0.250237039743928,0,0.877955241761676,1.22595118319608,0.901428353439581,0.113432183160021,2.69084453533293,1.92201649936711,2.11931901159562,6.00182192168805,1.33968288009971,2.83404594050192,1.30281799432113,3.03797398034279,1.36411807225678,1.00973509697646,0.644349290496095,2.7479829659198,4.61512470271599,0.503760491138201,1.01736355386293,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,3.12899064659632,9.64861407289328,0,1.85747171212792,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47424675..47424687,+ | |||
|id=chr21:47424675..47424687,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.75e-32!180;CL:0000057!3.02e-20!75;CL:0000680!1.89e-12!57;CL:0000056!1.89e-12!57;CL:0000355!1.89e-12!57;CL:0000393!2.60e-12!60;CL:0000211!2.60e-12!60;CL:0000187!2.13e-11!54;CL:0002620!5.06e-11!23;CL:0000183!5.75e-11!59;CL:0000048!1.18e-10!430;CL:0000034!5.16e-10!444;CL:0000723!8.55e-10!436;CL:0000192!9.94e-09!42;CL:0000514!9.94e-09!42;CL:0000499!5.19e-08!27;CL:0002570!6.74e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.45e-14;8!CL:0002620;3.76e-13;23!CL:0000057;1.95e-09;73!CL:0000134;2.24e-09;55!CL:0000499;1.03e-08;28!CL:0000723;4.59e-08;61!CL:0002334;4.81e-08;12!CL:0002320;5.16e-08;188!CL:0000048;5.94e-08;58!CL:0000135;4.66e-07;3!CL:0000388;4.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.24e-23,76;CL:0000048,1.49e-17,427;CL:0000723,6.10e-17,433;CL:0000034,3.76e-16,441;CL:0002320,8.90e-15,361;CL:0002570,9.48e-15,8;CL:0002620,6.11e-13,23;CL:0000134,1.74e-12,354;CL:0000219,1.44e-10,386;CL:0000499,1.29e-08,28;CL:0002334,5.74e-08,12;CL:0000135,4.60e-07,3;CL:0000388,4.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.17e-08;5!DOID:450;1.17e-08;5!DOID:66;1.17e-08;5!DOID:423;1.17e-08;5!DOID:0080000;1.17e-08;5!DOID:11722;1.17e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.48e-09,5;DOID:450,8.48e-09,5;DOID:66,8.48e-09,5;DOID:423,8.48e-09,5;DOID:0080000,8.48e-09,5;DOID:11722,8.48e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.23e-16!83;UBERON:0002329!3.23e-16!83;UBERON:0003077!3.23e-16!83;UBERON:0003059!3.23e-16!83;UBERON:0007282!3.23e-16!83;UBERON:0009618!3.23e-16!83;UBERON:0007285!3.23e-16!83;UBERON:0004290!1.51e-15!70;UBERON:0001134!2.84e-13!61;UBERON:0002036!2.84e-13!61;UBERON:0003082!2.84e-13!61;UBERON:0000486!3.38e-13!82;UBERON:0002385!4.58e-13!63;UBERON:0001015!4.58e-13!63;UBERON:0000383!4.58e-13!63;UBERON:0001013!1.14e-11!14;UBERON:0005256!1.96e-10!143;UBERON:0002199!3.33e-10!45;UBERON:0002416!3.33e-10!45;UBERON:0002100!1.29e-08!216;UBERON:0003102!1.36e-08!95;UBERON:0000475!9.21e-08!365;UBERON:0002097!1.81e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.62e-20;14!UBERON:0002199;1.80e-12;46!UBERON:0002416;1.80e-12;46!UBERON:0002384;2.30e-09;198!UBERON:0002072;4.56e-09;5!UBERON:0002097;4.72e-09;41!UBERON:0003102;2.81e-08;50!UBERON:0007846;4.66e-07;3!UBERON:0000043;4.66e-07;3!UBERON:0007845;4.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.97e-20,14;UBERON:0002199,5.87e-17,46;UBERON:0002416,5.87e-17,46;UBERON:0002384,5.83e-15,371;UBERON:0002097,1.18e-11,41;UBERON:0003102,2.31e-11,99;UBERON:0002072,3.34e-09,5;UBERON:0007524,9.35e-08,73;UBERON:0002329,3.03e-07,71;UBERON:0003059,3.03e-07,71;UBERON:0007282,3.03e-07,71;UBERON:0004290,3.03e-07,71;UBERON:0009618,3.03e-07,71;UBERON:0007846,4.60e-07,3;UBERON:0000043,4.60e-07,3;UBERON:0007845,4.60e-07,3;UBERON:0003077,4.61e-07,72;UBERON:0007285,4.61e-07,72 | |||
|phase1_expression=0.908391896352783,2.35510576280081,2.39622486963151,0,0.893922188854576,1.74467704820074,2.53299878168311,3.79031924056099,2.08948502559871,0,0,0.218441372130172,0,0.618831764800233,1.65698687863958,4.70627602516243,0,1.46062018077475,3.41552959153355,0.246242116153576,1.42800483870977,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,3.2529523714611,4.01070328508712,1.88300474649071,1.5905718941022,0.973269740605272,0.0945348171640679,0.221729397462564,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,1.32409180813219,2.29469296599051,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0,0.817309515567294,1.05950199351452,4.03323147135999,0,2.18512053781224,0.570471821544449,2.39117888882882,0.23486899728753,0.971237666208789,0,1.42907919878425,1.47401180774122,0.309977343527296,4.75201142912821,2.71993622206413,0,2.87447256726495,0,0.250237039743928,0,0.877955241761676,1.22595118319608,0.901428353439581,0.113432183160021,2.69084453533293,1.92201649936711,2.11931901159562,6.00182192168805,1.33968288009971,2.83404594050192,1.30281799432113,3.03797398034279,1.36411807225678,1.00973509697646,0.644349290496095,2.7479829659198,4.61512470271599,0.503760491138201,1.01736355386293,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,3.12899064659632,9.64861407289328,0,1.85747171212792,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0.672786506072164,0,0.5867062865676,0.387815147273333,7.15312891703765,4.22651376278,0.531876233169741,1.04007436911366,0.257207374262142,0,0,1.28680194292333,3.7983512377401,0,1.62868092146868,1.42156779497018,0,0,0,0.199945982364114,0,0,0,1.4377491329495,1.14861935834114,0,1.59259437334337,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0.736148950314839,1.00034104211935,1.89885516589815,0.623912584592421,1.07057393278297,0.630809660135739,0.819989904948992,0.601892199455438,0,0,2.65690239414175,0,1.04260337361699,1.17480694477644,2.05886054286514,0,0,0,0,0,0,0.496215615637554,1.07423381301644,0.280660094433074,1.02511319404561,0,0.64341568457443,2.96836132889982,1.85051632563187,4.26148140751505,2.7101961484557,2.07701771673448,4.99704627377825,0.120859449591622,0,0,0.574072240823034,2.73136752010076,1.44236856455367,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,2.61010939388729,0.462145851343933,0.460511024178389,0.413509717453592,0.751941714077915,0.725083469571143,0.426133137080504,2.75999310504886,0,0,0,0,0,6.61105928344344,0.6970372701606,0.308033580176089,0.532306030317022,1.73986598415015,1.48259375283136,0.143124886741991,0.372158369359667,0.632758849437452,0.571890581771475,0.255897791311334,2.1396949401696,0.636406495851874,0,0.899362287916574,1.92175920815238,0.235624804691373,0.808729926293264,0,1.26377536871694,0.48763373908959,1.21856744815642,0,1.50149902548784,1.55545975149084,0,1.10273068709225,0,0,1.15755106853338,1.9676842561399,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.88424136911809,0,0.354761064070598,1.05553817648832,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0.95497793895076,0,0.307160702099232,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,3.73247505194169,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0.569219092059585,0,0,0,0,0.698906672968121,1.0319161948297,0,0,0,0.387956065953678,0,0.451961481561065,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0.335917362433631,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0.0607495566580247,0,0,0.0524545881349981,0.316801009558219,0,0,0.714695326373367,0.6620919703654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| |||
|short_description=p@chr21:47424675..47424687,+ | |||
}} |
Revision as of 10:48, 12 September 2013
Short description: | p@chr21:47424675..47424687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:47424675..47424687, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.24e-23 | 76 |
multi fate stem cell | 1.49e-17 | 427 |
somatic stem cell | 6.10e-17 | 433 |
stem cell | 3.76e-16 | 441 |
connective tissue cell | 8.90e-15 | 361 |
mesenchymal stem cell of adipose | 9.48e-15 | 8 |
skin fibroblast | 6.11e-13 | 23 |
mesenchymal cell | 1.74e-12 | 354 |
motile cell | 1.44e-10 | 386 |
stromal cell | 1.29e-08 | 28 |
preadipocyte | 5.74e-08 | 12 |
fibrocyte | 4.60e-07 | 3 |
tendon cell | 4.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.97e-20 | 14 |
integument | 5.87e-17 | 46 |
integumental system | 5.87e-17 | 46 |
connective tissue | 5.83e-15 | 371 |
skin of body | 1.18e-11 | 41 |
surface structure | 2.31e-11 | 99 |
hypodermis | 3.34e-09 | 5 |
dense mesenchyme tissue | 9.35e-08 | 73 |
somite | 3.03e-07 | 71 |
presomitic mesoderm | 3.03e-07 | 71 |
presumptive segmental plate | 3.03e-07 | 71 |
dermomyotome | 3.03e-07 | 71 |
trunk paraxial mesoderm | 3.03e-07 | 71 |
dense regular connective tissue | 4.60e-07 | 3 |
tendon | 4.60e-07 | 3 |
regular connective tissue | 4.60e-07 | 3 |
paraxial mesoderm | 4.61e-07 | 72 |
presumptive paraxial mesoderm | 4.61e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.48e-09 | 5 |
myotonic disease | 8.48e-09 | 5 |
muscle tissue disease | 8.48e-09 | 5 |
myopathy | 8.48e-09 | 5 |
muscular disease | 8.48e-09 | 5 |
myotonic dystrophy | 8.48e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.