FFCP PHASE1:Hg19::chr2:21228214..21228225,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=603|TSSclassifier=S|UniProt=P04114|association_with_transcript=83bp_to_X03325_5end|coexpression_cluster_id=C5|description=CAGE_peak_41_at_APOB_5end|id=chr2:21228214..21228225,-|ontology_enrichment_celltype=CL:0000181!2.19e-40!12;CL:0000417!2.19e-40!12;CL:0000668!2.19e-40!12;CL:0000414!2.19e-40!12;CL:0000412!2.19e-40!12;CL:0000182!2.19e-40!12;CL:0000223!6.24e-10!59|ontology_enrichment_celltype_v019=CL:0000182;1.91e-45;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.32e-45,12;CL:0000223,2.92e-09,58|ontology_enrichment_development_v019=UBERON:0004161;1.90e-34;11!UBERON:0009497;3.50e-29;13!UBERON:0001041;1.04e-12;30!UBERON:0003104;2.78e-12;31!CL:0000223;2.00e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.89e-42!19;UBERON:0006925!7.89e-42!19;UBERON:0008836!7.89e-42!19;UBERON:0008835!5.53e-36!22;UBERON:0003894!5.53e-36!22;UBERON:0009854!2.26e-34!23;UBERON:0007499!1.54e-31!25;UBERON:0009497!1.54e-31!25;UBERON:0000015!1.54e-31!25;UBERON:0002423!1.54e-31!25;UBERON:0006235!1.54e-31!25;UBERON:0004161!1.54e-31!25;UBERON:0005057!2.77e-30!26;UBERON:0009856!2.77e-30!26;UBERON:0002365!3.19e-25!31;UBERON:0002330!3.19e-25!31;UBERON:0002368!3.27e-22!35;UBERON:0003929!3.23e-17!54;UBERON:0000949!5.09e-17!45;UBERON:0004921!5.50e-15!129;UBERON:0004185!5.50e-15!129;UBERON:0005172!1.04e-13!55;UBERON:0005173!1.04e-13!55;UBERON:0002530!1.06e-12!59;UBERON:0002417!3.04e-12!61;UBERON:0000916!3.04e-12!61;UBERON:0001007!4.24e-12!155;UBERON:0001555!4.24e-12!155;UBERON:0007026!4.24e-12!155;UBERON:0004119!6.58e-11!169;UBERON:0000925!6.58e-11!169;UBERON:0006595!6.58e-11!169;UBERON:0005911!7.47e-11!82;UBERON:0001041!7.69e-09!98;UBERON:0000160!1.05e-08!27;UBERON:0005177!5.65e-08!107;UBERON:0009569!1.79e-07!113;UBERON:0005409!9.77e-07!35|ontology_enrichment_uberon_v019=UBERON:0002107;9.32e-51;19!UBERON:0006925;9.32e-51;19!UBERON:0002423;1.74e-38;25!UBERON:0002365;2.94e-31;31!UBERON:0002330;2.94e-31;31!UBERON:0002368;9.76e-26;33!UBERON:0000949;2.55e-19;43!UBERON:0002108;5.27e-13;4!UBERON:0005172;1.41e-12;52!UBERON:0005173;1.41e-12;52!UBERON:0002417;3.36e-11;58!UBERON:0000916;3.36e-11;58!UBERON:0002530;5.37e-10;57!UBERON:0001007;3.76e-09;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.06e-50,19;UBERON:0006925,1.06e-50,19;UBERON:0008836,1.06e-50,19;UBERON:0008835,9.75e-44,22;UBERON:0003894,9.75e-44,22;UBERON:0009854,8.08e-42,23;UBERON:0007499,1.93e-38,25;UBERON:0009497,1.93e-38,25;UBERON:0000015,1.93e-38,25;UBERON:0002423,1.93e-38,25;UBERON:0006235,1.93e-38,25;UBERON:0004161,1.93e-38,25;UBERON:0009856,6.01e-37,26;UBERON:0002365,6.43e-31,31;UBERON:0002330,6.43e-31,31;UBERON:0002368,2.48e-27,35;UBERON:0000949,3.81e-21,45;UBERON:0003929,1.57e-17,54;UBERON:0005172,1.57e-17,54;UBERON:0005173,1.57e-17,54;UBERON:0002530,5.39e-16,59;UBERON:0002417,1.02e-15,60;UBERON:0000916,1.02e-15,60;UBERON:0002108,4.39e-13,4;UBERON:0004921,6.32e-12,118;UBERON:0005911,2.47e-11,82;UBERON:0001041,1.21e-10,87;UBERON:0001007,1.54e-09,145;UBERON:0001555,1.54e-09,145;UBERON:0007026,1.54e-09,145;UBERON:0005177,4.50e-09,101;UBERON:0004119,1.49e-08,160;UBERON:0000925,1.49e-08,160;UBERON:0006595,1.49e-08,160;UBERON:0009569,4.11e-08,112;UBERON:0003914,9.80e-08,117;UBERON:0005256,2.18e-07,122;UBERON:0011216,4.35e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,5.89696330006576,4.13552934676983,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.10296455230113,0.906574442192831,1.01105315781277,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56898487976713,3.97520666736664,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=603 | |||
|TSSclassifier=S | |||
|UniProt=P04114 | |||
|association_with_transcript=83bp_to_X03325_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_41_at_APOB_5end | |||
|id=chr2:21228214..21228225,- | |||
|ontology_enrichment_celltype=CL:0000181!2.19e-40!12;CL:0000417!2.19e-40!12;CL:0000668!2.19e-40!12;CL:0000414!2.19e-40!12;CL:0000412!2.19e-40!12;CL:0000182!2.19e-40!12;CL:0000223!6.24e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.91e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.32e-45,12;CL:0000223,2.92e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.90e-34;11!UBERON:0009497;3.50e-29;13!UBERON:0001041;1.04e-12;30!UBERON:0003104;2.78e-12;31!CL:0000223;2.00e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.89e-42!19;UBERON:0006925!7.89e-42!19;UBERON:0008836!7.89e-42!19;UBERON:0008835!5.53e-36!22;UBERON:0003894!5.53e-36!22;UBERON:0009854!2.26e-34!23;UBERON:0007499!1.54e-31!25;UBERON:0009497!1.54e-31!25;UBERON:0000015!1.54e-31!25;UBERON:0002423!1.54e-31!25;UBERON:0006235!1.54e-31!25;UBERON:0004161!1.54e-31!25;UBERON:0005057!2.77e-30!26;UBERON:0009856!2.77e-30!26;UBERON:0002365!3.19e-25!31;UBERON:0002330!3.19e-25!31;UBERON:0002368!3.27e-22!35;UBERON:0003929!3.23e-17!54;UBERON:0000949!5.09e-17!45;UBERON:0004921!5.50e-15!129;UBERON:0004185!5.50e-15!129;UBERON:0005172!1.04e-13!55;UBERON:0005173!1.04e-13!55;UBERON:0002530!1.06e-12!59;UBERON:0002417!3.04e-12!61;UBERON:0000916!3.04e-12!61;UBERON:0001007!4.24e-12!155;UBERON:0001555!4.24e-12!155;UBERON:0007026!4.24e-12!155;UBERON:0004119!6.58e-11!169;UBERON:0000925!6.58e-11!169;UBERON:0006595!6.58e-11!169;UBERON:0005911!7.47e-11!82;UBERON:0001041!7.69e-09!98;UBERON:0000160!1.05e-08!27;UBERON:0005177!5.65e-08!107;UBERON:0009569!1.79e-07!113;UBERON:0005409!9.77e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.32e-51;19!UBERON:0006925;9.32e-51;19!UBERON:0002423;1.74e-38;25!UBERON:0002365;2.94e-31;31!UBERON:0002330;2.94e-31;31!UBERON:0002368;9.76e-26;33!UBERON:0000949;2.55e-19;43!UBERON:0002108;5.27e-13;4!UBERON:0005172;1.41e-12;52!UBERON:0005173;1.41e-12;52!UBERON:0002417;3.36e-11;58!UBERON:0000916;3.36e-11;58!UBERON:0002530;5.37e-10;57!UBERON:0001007;3.76e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.06e-50,19;UBERON:0006925,1.06e-50,19;UBERON:0008836,1.06e-50,19;UBERON:0008835,9.75e-44,22;UBERON:0003894,9.75e-44,22;UBERON:0009854,8.08e-42,23;UBERON:0007499,1.93e-38,25;UBERON:0009497,1.93e-38,25;UBERON:0000015,1.93e-38,25;UBERON:0002423,1.93e-38,25;UBERON:0006235,1.93e-38,25;UBERON:0004161,1.93e-38,25;UBERON:0009856,6.01e-37,26;UBERON:0002365,6.43e-31,31;UBERON:0002330,6.43e-31,31;UBERON:0002368,2.48e-27,35;UBERON:0000949,3.81e-21,45;UBERON:0003929,1.57e-17,54;UBERON:0005172,1.57e-17,54;UBERON:0005173,1.57e-17,54;UBERON:0002530,5.39e-16,59;UBERON:0002417,1.02e-15,60;UBERON:0000916,1.02e-15,60;UBERON:0002108,4.39e-13,4;UBERON:0004921,6.32e-12,118;UBERON:0005911,2.47e-11,82;UBERON:0001041,1.21e-10,87;UBERON:0001007,1.54e-09,145;UBERON:0001555,1.54e-09,145;UBERON:0007026,1.54e-09,145;UBERON:0005177,4.50e-09,101;UBERON:0004119,1.49e-08,160;UBERON:0000925,1.49e-08,160;UBERON:0006595,1.49e-08,160;UBERON:0009569,4.11e-08,112;UBERON:0003914,9.80e-08,117;UBERON:0005256,2.18e-07,122;UBERON:0011216,4.35e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,5.89696330006576,4.13552934676983,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.10296455230113,0.906574442192831,1.01105315781277,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56898487976713,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54348316215889,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p41@APOB | |||
}} |
Revision as of 16:24, 12 September 2013
Short description: | p41@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_41_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 83bp_to_X03325_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.32e-45 | 12 |
endodermal cell | 2.92e-09 | 58 |
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