FFCP PHASE1:Mm9::chr10:29730700..29730731,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:29730700..29730731,+|id=chr10:29730700..29730731,+|ontology_enrichment_celltype=CL:0000063!5.23e-12!66;CL:0000988!8.24e-10!32;CL:0002032!8.24e-10!32;CL:0000037!8.24e-10!32;CL:0000566!8.24e-10!32;CL:0000837!8.24e-10!32;CL:0000738!1.81e-09!17;CL:0002087!1.81e-09!17;CL:0002031!2.28e-09!25;CL:0000542!1.37e-08!13;CL:0000051!1.37e-08!13;CL:0002320!3.32e-08!46;CL:0000134!3.32e-08!46;CL:0000219!6.06e-08!54;CL:0000838!1.08e-07!12;CL:0000548!6.64e-07!115;CL:0000004!6.64e-07!115;CL:0000255!6.64e-07!115;CL:0002076!7.41e-07!15;CL:0000144!9.89e-07!121;CL:0000012!9.89e-07!121|ontology_enrichment_celltype_v019_2=CL:0002476,8.47e-23,2;CL:0002293,8.79e-16,3;CL:0002076,3.35e-12,15;CL:0000625,5.53e-12,1;CL:0002194,6.31e-12,4;CL:0000766,6.31e-12,4;CL:0000234,6.31e-12,4;CL:0000576,6.31e-12,4;CL:0000235,6.31e-12,4;CL:0000864,6.31e-12,4;CL:0002009,6.31e-12,4;CL:0000040,6.31e-12,4;CL:0000559,6.31e-12,4;CL:0000223,2.97e-09,20;CL:0000239,2.89e-08,6;CL:0000677,2.89e-08,6;CL:0000584,2.89e-08,6;CL:0000066,1.79e-07,25;CL:0000075,3.27e-07,7;CL:0000473,3.27e-07,7;CL:0000557,3.27e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.32e-08!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.348975407639361,0,0.90739263392049,1.00179145989269,0.16787927191189,3.03696432774183,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0.202475267389826,0.699561878128147,0.315462165358238,0.822686601634433,0,0,0,0.522399578277871,0.639969691173627,0,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.454357159999104,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.772043721344145,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,1.10992976687032,0.448569283047378,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr10:29730700..29730731,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:29730700..29730731,+ | |||
|id=chr10:29730700..29730731,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.23e-12!66;CL:0000988!8.24e-10!32;CL:0002032!8.24e-10!32;CL:0000037!8.24e-10!32;CL:0000566!8.24e-10!32;CL:0000837!8.24e-10!32;CL:0000738!1.81e-09!17;CL:0002087!1.81e-09!17;CL:0002031!2.28e-09!25;CL:0000542!1.37e-08!13;CL:0000051!1.37e-08!13;CL:0002320!3.32e-08!46;CL:0000134!3.32e-08!46;CL:0000219!6.06e-08!54;CL:0000838!1.08e-07!12;CL:0000548!6.64e-07!115;CL:0000004!6.64e-07!115;CL:0000255!6.64e-07!115;CL:0002076!7.41e-07!15;CL:0000144!9.89e-07!121;CL:0000012!9.89e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,8.47e-23,2;CL:0002293,8.79e-16,3;CL:0002076,3.35e-12,15;CL:0000625,5.53e-12,1;CL:0002194,6.31e-12,4;CL:0000766,6.31e-12,4;CL:0000234,6.31e-12,4;CL:0000576,6.31e-12,4;CL:0000235,6.31e-12,4;CL:0000864,6.31e-12,4;CL:0002009,6.31e-12,4;CL:0000040,6.31e-12,4;CL:0000559,6.31e-12,4;CL:0000223,2.97e-09,20;CL:0000239,2.89e-08,6;CL:0000677,2.89e-08,6;CL:0000584,2.89e-08,6;CL:0000066,1.79e-07,25;CL:0000075,3.27e-07,7;CL:0000473,3.27e-07,7;CL:0000557,3.27e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.32e-08!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.348975407639361,0,0.90739263392049,1.00179145989269,0.16787927191189,3.03696432774183,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0.202475267389826,0.699561878128147,0.315462165358238,0.822686601634433,0,0,0,0.522399578277871,0.639969691173627,0,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.454357159999104,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.772043721344145,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,1.10992976687032,0.448569283047378,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:29730700..29730731,+ | |||
}} |
Revision as of 16:33, 12 September 2013
Short description: | p@chr10:29730700..29730731, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:29730700..29730731, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 8.47e-23 | 2 |
epithelial cell of thymus | 8.79e-16 | 3 |
endo-epithelial cell | 3.35e-12 | 15 |
CD8-positive, alpha-beta T cell | 5.53e-12 | 1 |
monopoietic cell | 6.31e-12 | 4 |
myeloid leukocyte | 6.31e-12 | 4 |
phagocyte | 6.31e-12 | 4 |
monocyte | 6.31e-12 | 4 |
macrophage | 6.31e-12 | 4 |
tissue-resident macrophage | 6.31e-12 | 4 |
macrophage dendritic cell progenitor | 6.31e-12 | 4 |
monoblast | 6.31e-12 | 4 |
promonocyte | 6.31e-12 | 4 |
endodermal cell | 2.97e-09 | 20 |
brush border epithelial cell | 2.89e-08 | 6 |
gut absorptive cell | 2.89e-08 | 6 |
enterocyte | 2.89e-08 | 6 |
epithelial cell | 1.79e-07 | 25 |
columnar/cuboidal epithelial cell | 3.27e-07 | 7 |
defensive cell | 3.27e-07 | 7 |
granulocyte monocyte progenitor cell | 3.27e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.