FFCP PHASE1:Mm9::chr10:59762729..59762769,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:59762729..59762769,+|id=chr10:59762729..59762769,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000723,6.02e-08,91;CL:0000048,6.02e-08,91;CL:0000034,2.12e-07,97;CL:0002321,4.98e-07,70;CL:0000219,6.00e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.83e-07!75;UBERON:0001016!1.83e-07!75;UBERON:0004121!3.31e-07!102;UBERON:0000924!3.31e-07!102;UBERON:0006601!3.31e-07!102;UBERON:0001017!3.70e-07!73;UBERON:0005743!3.70e-07!73;UBERON:0002204!5.99e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.59e-08,16;UBERON:0002204,2.67e-08,32;UBERON:0004121,2.25e-07,95;UBERON:0000924,2.25e-07,95;UBERON:0006601,2.25e-07,95;UBERON:0001016,5.02e-07,75;UBERON:0001017,7.70e-07,73|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0.258246646883153,0,0,0,0,0,0.262261207256992,0.999329285446988,0,2.09868563438444,0.630924330716475,1.37114433605739,1.27316895539409,0.850432901510698,0.297872853602656,0.522399578277871,0.47997726838022,0.22940928106717,0.57423196411502,0,0.215471232685889,0.760093677825496,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0.837063261473815,0,1.0470474879476,0,0,0,1.1330713617802,2.02753862439029,0.917733760808408,0.782391344348039,0.872100625521786,1.75748946187577,1.74986909166855,1.39986421625363,1.43752564364972,0.335565212115473,0.725362142011344,1.34437519656986,1.28629718017973,1.43266719969378,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,1.0165335962074,3.55717918444456,13.0485459005803,18.7884608887725,16.3410426437603,3.59520132622086,3.84218305321555,0,0.675029691658453,0,3.42781181284564,1.32521124570968,0.61245399607477,0.383381884072945,0,2.20231761998777,1.91531007127782,1.68967186581868,0.263772575460388,0.365950574409639,0,1.95428099300967,1.68828783009504,2.13917546887534,1.47314292736834,1.13897344639282,0.186399445825301,0.530083353332288,1.058001841495,1.15945795480671,0,1.3599426674155,0,2.59910566979068,0.896053774194671,0.702222100658759,1.1930122580464,1.55871602761721,0.70667914902068,0.704217098883403,6.41632387071589,2.54805239706646,14.2213340630666,0.216491041011214,0,0.505524445014783,0.45673551887624,0.776813650941515,0.445326417194474,0,0.608930956624282,0.230615497256059,0.60289056221049,0.705532242814229,0.251333182659351,1.97755974187499,1.3013942122792,1.76922110389975,0.647067399789637,0.220841518460394,0.969750506270444,0,2.04946557908083,3.35114730901528,0.255457055208591,0.359445373517761,0,0.127070227073065,0.449371918214468,1.83000241127451,0.502617408451458,0.521472960576829,0.511430914660661,1.87009240103604,0.811206315338788,0.407357455401265,0.746441823660558,1.26361379216837,4.20883711772948,0.260240885925407,0.459804208866946,0.180062129805349,0.60281927134286,0.476255494059295,0.12811372028485,0,1.55222022443409,0.646703978798527,0,0.175951124163949,0.219195732427575,1.11218899690239,0,0.411564272815887,0,1.40442637462647,0,0.568326998791185,0,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.822799249567402,0.820837320395476,0.0810688095458557,0.584799949701329,0.878200461164203,0.805238512562231,0.420579897128254,0.411618449517138,0,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.295220295959204,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0,0,0.972811360650212,1.09824565275233,14.3768206527355,1.86070473834252,0.936113019343682,0.505157755894224,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,33.1740824666399,9.79030230873677,0.983528546038072,1.10374698521893,0.963303539926752,0.586058432961016,0.163934945376675,1.00988370881749,0.631016438832513,1.95219372148319,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,1.61924280669958,0.292255857911312,0.395287777946524,1.92792789853084,1.70328102249922,0.534196811001766,0.162886959353576,0.824850614862677,0,0,0.302323556964751,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.713475270408282,0.329098041204242,0.913394847343798,7.04015124191131,2.54198485036584,0.220528398054962,1.97863503529776,0.322928853391811,0.0603129249281559,0.358117032009409,0,0.291480836629851,3.70850604021019,0.854354403989263,0.412773735926445,0.7407781094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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:59762729..59762769,+ | |||
|id=chr10:59762729..59762769,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,6.02e-08,91;CL:0000048,6.02e-08,91;CL:0000034,2.12e-07,97;CL:0002321,4.98e-07,70;CL:0000219,6.00e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.83e-07!75;UBERON:0001016!1.83e-07!75;UBERON:0004121!3.31e-07!102;UBERON:0000924!3.31e-07!102;UBERON:0006601!3.31e-07!102;UBERON:0001017!3.70e-07!73;UBERON:0005743!3.70e-07!73;UBERON:0002204!5.99e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.59e-08,16;UBERON:0002204,2.67e-08,32;UBERON:0004121,2.25e-07,95;UBERON:0000924,2.25e-07,95;UBERON:0006601,2.25e-07,95;UBERON:0001016,5.02e-07,75;UBERON:0001017,7.70e-07,73 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0.258246646883153,0,0,0,0,0,0.262261207256992,0.999329285446988,0,2.09868563438444,0.630924330716475,1.37114433605739,1.27316895539409,0.850432901510698,0.297872853602656,0.522399578277871,0.47997726838022,0.22940928106717,0.57423196411502,0,0.215471232685889,0.760093677825496,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0.837063261473815,0,1.0470474879476,0,0,0,1.1330713617802,2.02753862439029,0.917733760808408,0.782391344348039,0.872100625521786,1.75748946187577,1.74986909166855,1.39986421625363,1.43752564364972,0.335565212115473,0.725362142011344,1.34437519656986,1.28629718017973,1.43266719969378,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,1.0165335962074,3.55717918444456,13.0485459005803,18.7884608887725,16.3410426437603,3.59520132622086,3.84218305321555,0,0.675029691658453,0,3.42781181284564,1.32521124570968,0.61245399607477,0.383381884072945,0,2.20231761998777,1.91531007127782,1.68967186581868,0.263772575460388,0.365950574409639,0,1.95428099300967,1.68828783009504,2.13917546887534,1.47314292736834,1.13897344639282,0.186399445825301,0.530083353332288,1.058001841495,1.15945795480671,0,1.3599426674155,0,2.59910566979068,0.896053774194671,0.702222100658759,1.1930122580464,1.55871602761721,0.70667914902068,0.704217098883403,6.41632387071589,2.54805239706646,14.2213340630666,0.216491041011214,0,0.505524445014783,0.45673551887624,0.776813650941515,0.445326417194474,0,0.608930956624282,0.230615497256059,0.60289056221049,0.705532242814229,0.251333182659351,1.97755974187499,1.3013942122792,1.76922110389975,0.647067399789637,0.220841518460394,0.969750506270444,0,2.04946557908083,3.35114730901528,0.255457055208591,0.359445373517761,0,0.127070227073065,0.449371918214468,1.83000241127451,0.502617408451458,0.521472960576829,0.511430914660661,1.87009240103604,0.811206315338788,0.407357455401265,0.746441823660558,1.26361379216837,4.20883711772948,0.260240885925407,0.459804208866946,0.180062129805349,0.60281927134286,0.476255494059295,0.12811372028485,0,1.55222022443409,0.646703978798527,0,0.175951124163949,0.219195732427575,1.11218899690239,0,0.411564272815887,0,1.40442637462647,0,0.568326998791185,0,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.822799249567402,0.820837320395476,0.0810688095458557,0.584799949701329,0.878200461164203,0.805238512562231,0.420579897128254,0.411618449517138,0,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.295220295959204,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0,0,0.972811360650212,1.09824565275233,14.3768206527355,1.86070473834252,0.936113019343682,0.505157755894224,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,33.1740824666399,9.79030230873677,0.983528546038072,1.10374698521893,0.963303539926752,0.586058432961016,0.163934945376675,1.00988370881749,0.631016438832513,1.95219372148319,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,1.61924280669958,0.292255857911312,0.395287777946524,1.92792789853084,1.70328102249922,0.534196811001766,0.162886959353576,0.824850614862677,0,0,0.302323556964751,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.713475270408282,0.329098041204242,0.913394847343798,7.04015124191131,2.54198485036584,0.220528398054962,1.97863503529776,0.322928853391811,0.0603129249281559,0.358117032009409,0,0.291480836629851,3.70850604021019,0.854354403989263,0.412773735926445,0.740778109478847,0.188368457004691,0.410082683163076,0,0,0,0.138199973804424,0.954670618015114,0,0,0.432021363287205,0.209088296014469,0.655087691238533,0.539457385539283,0.578574190077352,0.26175594198403,0.388844919875379,1.24267862617385,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,0.410843828659309,0.389762468933385,0,0,0.240390899039938,0,0.706765149637033,0.228620419965,0.504130925684203,0.779663045918019,0.0962118416403295,0.350630706544707,0.453460767230423,0.221985953374065,0.717710852875806,1.00730769818447,0.772758376128762,1.12609485270709,0.183151624267265,0.428736758158132,0,0,0.920650473014354,1.14579102687879,0.859265911718438,4.11049511862385,1.5107877947794,4.72515750162264,1.80128481289688,0.9062848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| |||
|short_description=p@chr10:59762729..59762769,+ | |||
}} |
Revision as of 17:00, 12 September 2013
Short description: | p@chr10:59762729..59762769, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59762729..59762769, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 6.02e-08 | 91 |
multi fate stem cell | 6.02e-08 | 91 |
stem cell | 2.12e-07 | 97 |
embryonic cell | 4.98e-07 | 70 |
motile cell | 6.00e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.59e-08 | 16 |
musculoskeletal system | 2.67e-08 | 32 |
ectoderm-derived structure | 2.25e-07 | 95 |
ectoderm | 2.25e-07 | 95 |
presumptive ectoderm | 2.25e-07 | 95 |
nervous system | 5.02e-07 | 75 |
central nervous system | 7.70e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.