FFCP PHASE1:Mm9::chr10:68614175..68614197,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69288|HGNC=|MCL_coexpression_id=11|UniProt=E9PZ17|association_with_transcript=0bp_to_ENSMUST00000167286_5end|description=CAGE_peak_13_at_Rhobtb1_5end|id=chr10:68614175..68614197,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.75e-18!22;UBERON:0007499!2.75e-18!22;UBERON:0006925!2.75e-18!22;UBERON:0009497!2.75e-18!22;UBERON:0000015!2.75e-18!22;UBERON:0002423!2.75e-18!22;UBERON:0006235!2.75e-18!22;UBERON:0008835!2.75e-18!22;UBERON:0003894!2.75e-18!22;UBERON:0004161!2.75e-18!22;UBERON:0008836!2.75e-18!22;UBERON:0009854!2.42e-17!23;UBERON:0009856!2.42e-17!23;UBERON:0005172!6.66e-17!49;UBERON:0005173!6.66e-17!49;UBERON:0002417!6.66e-17!49;UBERON:0000916!6.66e-17!49;UBERON:0002365!1.11e-15!25;UBERON:0002330!1.11e-15!25;UBERON:0005177!5.51e-13!85;UBERON:0009569!3.38e-11!66;UBERON:0002100!1.98e-10!98;UBERON:0000949!3.18e-08!72;UBERON:0002113!8.76e-08!14;UBERON:0003918!8.76e-08!14;UBERON:0005095!8.76e-08!14;UBERON:0007687!8.76e-08!14;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0000466!4.44e-07!79;UBERON:0005057!5.59e-07!51;UBERON:0003914!8.14e-07!47;UBERON:0005256!8.14e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.39e-16,49;UBERON:0005173,3.39e-16,49;UBERON:0002417,3.39e-16,49;UBERON:0000916,3.39e-16,49;UBERON:0005177,3.83e-13,79;UBERON:0002107,1.00e-12,22;UBERON:0007499,1.00e-12,22;UBERON:0006925,1.00e-12,22;UBERON:0009497,1.00e-12,22;UBERON:0000015,1.00e-12,22;UBERON:0002423,1.00e-12,22;UBERON:0006235,1.00e-12,22;UBERON:0008835,1.00e-12,22;UBERON:0003894,1.00e-12,22;UBERON:0004161,1.00e-12,22;UBERON:0008836,1.00e-12,22;UBERON:0003104,1.01e-12,61;UBERON:0009142,1.01e-12,61;UBERON:0009854,3.80e-12,23;UBERON:0009856,3.80e-12,23;UBERON:0009569,1.20e-11,66;UBERON:0002100,2.47e-11,90;UBERON:0002365,3.97e-11,25;UBERON:0002330,3.97e-11,25;UBERON:0002113,9.79e-11,14;UBERON:0003918,9.79e-11,14;UBERON:0011143,9.79e-11,14;UBERON:0005095,9.79e-11,14;UBERON:0007687,9.79e-11,14;UBERON:0006554,2.52e-08,18;UBERON:0001008,7.01e-08,19;UBERON:0000489,4.07e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,3.77792234146472,3.89865850468601,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.775809948670503,2.31448205638051,3.35153646758564,1.77132177575523,11.4609071324204,13.5736880313981,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,0.486405680325106,1.09824565275233,0,2.60498663367952,0.936113019343682,2.02063102357689,2.33216637578486,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p13@Rhobtb1}} | ||
|EntrezGene=69288 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=E9PZ17 | |||
|association_with_transcript=0bp_to_ENSMUST00000167286_5end | |||
|description=CAGE_peak_13_at_Rhobtb1_5end | |||
|id=chr10:68614175..68614197,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.75e-18!22;UBERON:0007499!2.75e-18!22;UBERON:0006925!2.75e-18!22;UBERON:0009497!2.75e-18!22;UBERON:0000015!2.75e-18!22;UBERON:0002423!2.75e-18!22;UBERON:0006235!2.75e-18!22;UBERON:0008835!2.75e-18!22;UBERON:0003894!2.75e-18!22;UBERON:0004161!2.75e-18!22;UBERON:0008836!2.75e-18!22;UBERON:0009854!2.42e-17!23;UBERON:0009856!2.42e-17!23;UBERON:0005172!6.66e-17!49;UBERON:0005173!6.66e-17!49;UBERON:0002417!6.66e-17!49;UBERON:0000916!6.66e-17!49;UBERON:0002365!1.11e-15!25;UBERON:0002330!1.11e-15!25;UBERON:0005177!5.51e-13!85;UBERON:0009569!3.38e-11!66;UBERON:0002100!1.98e-10!98;UBERON:0000949!3.18e-08!72;UBERON:0002113!8.76e-08!14;UBERON:0003918!8.76e-08!14;UBERON:0005095!8.76e-08!14;UBERON:0007687!8.76e-08!14;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0000466!4.44e-07!79;UBERON:0005057!5.59e-07!51;UBERON:0003914!8.14e-07!47;UBERON:0005256!8.14e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.39e-16,49;UBERON:0005173,3.39e-16,49;UBERON:0002417,3.39e-16,49;UBERON:0000916,3.39e-16,49;UBERON:0005177,3.83e-13,79;UBERON:0002107,1.00e-12,22;UBERON:0007499,1.00e-12,22;UBERON:0006925,1.00e-12,22;UBERON:0009497,1.00e-12,22;UBERON:0000015,1.00e-12,22;UBERON:0002423,1.00e-12,22;UBERON:0006235,1.00e-12,22;UBERON:0008835,1.00e-12,22;UBERON:0003894,1.00e-12,22;UBERON:0004161,1.00e-12,22;UBERON:0008836,1.00e-12,22;UBERON:0003104,1.01e-12,61;UBERON:0009142,1.01e-12,61;UBERON:0009854,3.80e-12,23;UBERON:0009856,3.80e-12,23;UBERON:0009569,1.20e-11,66;UBERON:0002100,2.47e-11,90;UBERON:0002365,3.97e-11,25;UBERON:0002330,3.97e-11,25;UBERON:0002113,9.79e-11,14;UBERON:0003918,9.79e-11,14;UBERON:0011143,9.79e-11,14;UBERON:0005095,9.79e-11,14;UBERON:0007687,9.79e-11,14;UBERON:0006554,2.52e-08,18;UBERON:0001008,7.01e-08,19;UBERON:0000489,4.07e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,3.77792234146472,3.89865850468601,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.775809948670503,2.31448205638051,3.35153646758564,1.77132177575523,11.4609071324204,13.5736880313981,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,0.486405680325106,1.09824565275233,0,2.60498663367952,0.936113019343682,2.02063102357689,2.33216637578486,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p13@Rhobtb1 | |||
}} |
Revision as of 17:13, 12 September 2013
Short description: | p13@Rhobtb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Rhobtb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000167286_5end |
EntrezGene: | Rhobtb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.39e-16 | 49 |
abdominal segment element | 3.39e-16 | 49 |
abdominal segment of trunk | 3.39e-16 | 49 |
abdomen | 3.39e-16 | 49 |
trunk region element | 3.83e-13 | 79 |
liver | 1.00e-12 | 22 |
epithelial sac | 1.00e-12 | 22 |
digestive gland | 1.00e-12 | 22 |
epithelium of foregut-midgut junction | 1.00e-12 | 22 |
anatomical boundary | 1.00e-12 | 22 |
hepatobiliary system | 1.00e-12 | 22 |
foregut-midgut junction | 1.00e-12 | 22 |
hepatic diverticulum | 1.00e-12 | 22 |
liver primordium | 1.00e-12 | 22 |
septum transversum | 1.00e-12 | 22 |
liver bud | 1.00e-12 | 22 |
mesenchyme | 1.01e-12 | 61 |
entire embryonic mesenchyme | 1.01e-12 | 61 |
digestive tract diverticulum | 3.80e-12 | 23 |
sac | 3.80e-12 | 23 |
subdivision of trunk | 1.20e-11 | 66 |
trunk | 2.47e-11 | 90 |
exocrine gland | 3.97e-11 | 25 |
exocrine system | 3.97e-11 | 25 |
kidney | 9.79e-11 | 14 |
kidney mesenchyme | 9.79e-11 | 14 |
upper urinary tract | 9.79e-11 | 14 |
kidney rudiment | 9.79e-11 | 14 |
kidney field | 9.79e-11 | 14 |
urinary system structure | 2.52e-08 | 18 |
renal system | 7.01e-08 | 19 |
cavitated compound organ | 4.07e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.