FFCP PHASE1:Mm9::chr10:74594472..74594497,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:74594472..74594497,-|id=chr10:74594472..74594497,-|ontology_enrichment_celltype=CL:0000239!4.19e-10!6;CL:0000677!4.19e-10!6;CL:0000212!4.19e-10!6;CL:0000584!4.19e-10!6;CL:0000075!1.72e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.18e-17,6;CL:0000677,1.18e-17,6;CL:0000584,1.18e-17,6;CL:0000075,4.89e-15,7;CL:0002563,1.52e-11,9;CL:0002251,1.52e-11,9;CL:0000682,2.34e-09,3;CL:0000066,4.11e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.81e-21!43;UBERON:0005409!1.38e-17!59;UBERON:0000344!1.19e-13!15;UBERON:0001242!4.16e-11!13;UBERON:0000060!4.16e-11!13;UBERON:0001262!4.16e-11!13;UBERON:0004786!4.16e-11!13;UBERON:0004923!9.31e-10!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.47e-53,31;UBERON:0005409,1.92e-33,47;UBERON:0000344,1.64e-25,15;UBERON:0001242,1.19e-20,13;UBERON:0001262,1.19e-20,13;UBERON:0004786,1.19e-20,13;UBERON:0004923,5.18e-15,24;UBERON:0001007,8.24e-13,116;UBERON:0001555,8.24e-13,116;UBERON:0007026,8.24e-13,116;UBERON:0004119,1.69e-12,118;UBERON:0000925,1.69e-12,118;UBERON:0006595,1.69e-12,118;UBERON:0003350,1.52e-11,9;UBERON:0004808,1.52e-11,9;UBERON:0001277,1.52e-11,9;UBERON:0002108,3.41e-11,4;UBERON:0004921,1.01e-10,114;UBERON:0000485,2.56e-09,11;UBERON:0000331,1.89e-08,3;UBERON:0002116,1.89e-08,3;UBERON:0001204,1.89e-08,3;UBERON:0001168,1.89e-08,3|phase1_expression=0,21.287499866001,29.1199513209303,17.5429242557961,22.0394121176393,1.6787927191189,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,6.19405058881359,8.6134794617253,6.8921919385452,10.3426191689227,1.14014051673824,5.29263272495855,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1555457620117,16.1314845664762,0,0,0.128867461322093,1.81515172161008,4.00280478920767,3.04361001780095,10.9141684155238,9.0584425098206,6.78605063760728,3.58121649674071,5.65395852645448,10.7858329038507,10.1584883441106,9.95706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.269728692769641,0.330613822901344,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.320125762024346,0.34461281373368,0.952587382566147,0.579421629724277,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.789209134313529,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0.192906610981141,0,0,0.859484216193193,0,0,0|short_description=p@chr10:74594472..74594497,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:74594472..74594497,- | |||
|id=chr10:74594472..74594497,- | |||
|ontology_enrichment_celltype=CL:0000239!4.19e-10!6;CL:0000677!4.19e-10!6;CL:0000212!4.19e-10!6;CL:0000584!4.19e-10!6;CL:0000075!1.72e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.18e-17,6;CL:0000677,1.18e-17,6;CL:0000584,1.18e-17,6;CL:0000075,4.89e-15,7;CL:0002563,1.52e-11,9;CL:0002251,1.52e-11,9;CL:0000682,2.34e-09,3;CL:0000066,4.11e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.81e-21!43;UBERON:0005409!1.38e-17!59;UBERON:0000344!1.19e-13!15;UBERON:0001242!4.16e-11!13;UBERON:0000060!4.16e-11!13;UBERON:0001262!4.16e-11!13;UBERON:0004786!4.16e-11!13;UBERON:0004923!9.31e-10!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.47e-53,31;UBERON:0005409,1.92e-33,47;UBERON:0000344,1.64e-25,15;UBERON:0001242,1.19e-20,13;UBERON:0001262,1.19e-20,13;UBERON:0004786,1.19e-20,13;UBERON:0004923,5.18e-15,24;UBERON:0001007,8.24e-13,116;UBERON:0001555,8.24e-13,116;UBERON:0007026,8.24e-13,116;UBERON:0004119,1.69e-12,118;UBERON:0000925,1.69e-12,118;UBERON:0006595,1.69e-12,118;UBERON:0003350,1.52e-11,9;UBERON:0004808,1.52e-11,9;UBERON:0001277,1.52e-11,9;UBERON:0002108,3.41e-11,4;UBERON:0004921,1.01e-10,114;UBERON:0000485,2.56e-09,11;UBERON:0000331,1.89e-08,3;UBERON:0002116,1.89e-08,3;UBERON:0001204,1.89e-08,3;UBERON:0001168,1.89e-08,3 | |||
|phase1_expression=0,21.287499866001,29.1199513209303,17.5429242557961,22.0394121176393,1.6787927191189,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,6.19405058881359,8.6134794617253,6.8921919385452,10.3426191689227,1.14014051673824,5.29263272495855,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1555457620117,16.1314845664762,0,0,0.128867461322093,1.81515172161008,4.00280478920767,3.04361001780095,10.9141684155238,9.0584425098206,6.78605063760728,3.58121649674071,5.65395852645448,10.7858329038507,10.1584883441106,9.95706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.269728692769641,0.330613822901344,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.320125762024346,0.34461281373368,0.952587382566147,0.579421629724277,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.789209134313529,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0.192906610981141,0,0,0.859484216193193,0,0,0 | |||
|short_description=p@chr10:74594472..74594497,- | |||
}} |
Revision as of 17:20, 12 September 2013
Short description: | p@chr10:74594472..74594497, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:74594472..74594497, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.18e-17 | 6 |
gut absorptive cell | 1.18e-17 | 6 |
enterocyte | 1.18e-17 | 6 |
columnar/cuboidal epithelial cell | 4.89e-15 | 7 |
intestinal epithelial cell | 1.52e-11 | 9 |
epithelial cell of alimentary canal | 1.52e-11 | 9 |
M cell of gut | 2.34e-09 | 3 |
epithelial cell | 4.11e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.47e-53 | 31 |
gastrointestinal system | 1.92e-33 | 47 |
mucosa | 1.64e-25 | 15 |
intestinal mucosa | 1.19e-20 | 13 |
wall of intestine | 1.19e-20 | 13 |
gastrointestinal system mucosa | 1.19e-20 | 13 |
organ component layer | 5.18e-15 | 24 |
digestive system | 8.24e-13 | 116 |
digestive tract | 8.24e-13 | 116 |
primitive gut | 8.24e-13 | 116 |
endoderm-derived structure | 1.69e-12 | 118 |
endoderm | 1.69e-12 | 118 |
presumptive endoderm | 1.69e-12 | 118 |
epithelium of mucosa | 1.52e-11 | 9 |
gastrointestinal system epithelium | 1.52e-11 | 9 |
intestinal epithelium | 1.52e-11 | 9 |
small intestine | 3.41e-11 | 4 |
subdivision of digestive tract | 1.01e-10 | 114 |
simple columnar epithelium | 2.56e-09 | 11 |
ileal mucosa | 1.89e-08 | 3 |
ileum | 1.89e-08 | 3 |
mucosa of small intestine | 1.89e-08 | 3 |
wall of small intestine | 1.89e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.