FFCP PHASE1:Mm9::chr11:104444189..104444213,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:104444189..104444213,+|id=chr11:104444189..104444213,+|ontology_enrichment_celltype=CL:0000553!1.14e-08!6;CL:0000556!1.14e-08!6;CL:0000049!4.72e-07!19|ontology_enrichment_celltype_v019_2=CL:0000553,2.82e-17,6;CL:0000556,2.82e-17,6;CL:0000945,1.20e-12,1;CL:0000236,1.20e-12,1;CL:0000826,1.20e-12,1;CL:0000050,9.30e-12,9;CL:0002031,2.38e-11,25;CL:0000988,6.56e-09,32;CL:0002032,6.56e-09,32;CL:0000037,6.56e-09,32;CL:0000837,6.56e-09,32;CL:0000839,2.45e-08,13;CL:0000763,6.97e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.05e-12!48;UBERON:0002390!2.04e-10!45;UBERON:0003061!2.04e-10!45;UBERON:0003081!1.14e-09!88;UBERON:0005418!1.81e-09!5;UBERON:0002472!1.81e-09!5;UBERON:0008784!1.81e-09!5;UBERON:0006058!1.81e-09!5;UBERON:0004709!1.81e-09!5;UBERON:0005420!1.81e-09!5;UBERON:0006057!1.81e-09!5;UBERON:0000978!1.81e-09!5;UBERON:0002103!1.81e-09!5;UBERON:0000376!1.81e-09!5;UBERON:0000154!1.81e-09!5;UBERON:0005730!1.81e-09!5;UBERON:0002405!1.97e-09!70;UBERON:0000981!4.68e-08!4;UBERON:0002495!4.68e-08!4;UBERON:0003608!4.68e-08!4;UBERON:0003826!4.68e-08!4;UBERON:0008202!4.68e-08!4;UBERON:0004375!4.68e-08!4;UBERON:0002428!4.68e-08!4;UBERON:0003464!4.68e-08!4;UBERON:0003606!4.68e-08!4;UBERON:0009749!4.68e-08!4;UBERON:0003860!4.68e-08!4;UBERON:0005856!4.68e-08!4;UBERON:0005866!4.68e-08!4;UBERON:0007828!4.68e-08!4;UBERON:0005254!4.68e-08!4;UBERON:0001271!4.68e-08!4;UBERON:0002091!4.68e-08!4;UBERON:0001464!4.68e-08!4;UBERON:0003285!4.68e-08!4;UBERON:0010129!4.68e-08!4;UBERON:0006234!4.68e-08!4;UBERON:0002529!8.28e-08!6;UBERON:0004177!1.34e-07!29;UBERON:0002106!1.67e-07!6;UBERON:0004457!1.67e-07!6;UBERON:0000042!1.67e-07!6;UBERON:0004854!1.67e-07!6;UBERON:0009034!1.67e-07!6;UBERON:0002095!1.67e-07!6;UBERON:0004782!1.67e-07!6;UBERON:0003281!1.67e-07!6;UBERON:0009664!1.67e-07!6;UBERON:0002296!1.67e-07!6;UBERON:0005602!1.67e-07!6;UBERON:0001179!1.67e-07!6;UBERON:0006293!1.67e-07!6;UBERON:0001474!3.39e-07!22;UBERON:0004765!3.39e-07!22;UBERON:0001434!3.39e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.97e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,2.68142840554502,2.19383093769182,3.39511721438424,0,0.496454756004426,2.61199789138935,0.95995453676044,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86569557567435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0,0.255457055208591,0.479260498023681,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.546776910884101,2.0590035588587,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01362607645082,0.821687657318618,0.389762468933385,0.358053391334963,0.198681354781265,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr11:104444189..104444213,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:104444189..104444213,+ | |||
|id=chr11:104444189..104444213,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.14e-08!6;CL:0000556!1.14e-08!6;CL:0000049!4.72e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.82e-17,6;CL:0000556,2.82e-17,6;CL:0000945,1.20e-12,1;CL:0000236,1.20e-12,1;CL:0000826,1.20e-12,1;CL:0000050,9.30e-12,9;CL:0002031,2.38e-11,25;CL:0000988,6.56e-09,32;CL:0002032,6.56e-09,32;CL:0000037,6.56e-09,32;CL:0000837,6.56e-09,32;CL:0000839,2.45e-08,13;CL:0000763,6.97e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.05e-12!48;UBERON:0002390!2.04e-10!45;UBERON:0003061!2.04e-10!45;UBERON:0003081!1.14e-09!88;UBERON:0005418!1.81e-09!5;UBERON:0002472!1.81e-09!5;UBERON:0008784!1.81e-09!5;UBERON:0006058!1.81e-09!5;UBERON:0004709!1.81e-09!5;UBERON:0005420!1.81e-09!5;UBERON:0006057!1.81e-09!5;UBERON:0000978!1.81e-09!5;UBERON:0002103!1.81e-09!5;UBERON:0000376!1.81e-09!5;UBERON:0000154!1.81e-09!5;UBERON:0005730!1.81e-09!5;UBERON:0002405!1.97e-09!70;UBERON:0000981!4.68e-08!4;UBERON:0002495!4.68e-08!4;UBERON:0003608!4.68e-08!4;UBERON:0003826!4.68e-08!4;UBERON:0008202!4.68e-08!4;UBERON:0004375!4.68e-08!4;UBERON:0002428!4.68e-08!4;UBERON:0003464!4.68e-08!4;UBERON:0003606!4.68e-08!4;UBERON:0009749!4.68e-08!4;UBERON:0003860!4.68e-08!4;UBERON:0005856!4.68e-08!4;UBERON:0005866!4.68e-08!4;UBERON:0007828!4.68e-08!4;UBERON:0005254!4.68e-08!4;UBERON:0001271!4.68e-08!4;UBERON:0002091!4.68e-08!4;UBERON:0001464!4.68e-08!4;UBERON:0003285!4.68e-08!4;UBERON:0010129!4.68e-08!4;UBERON:0006234!4.68e-08!4;UBERON:0002529!8.28e-08!6;UBERON:0004177!1.34e-07!29;UBERON:0002106!1.67e-07!6;UBERON:0004457!1.67e-07!6;UBERON:0000042!1.67e-07!6;UBERON:0004854!1.67e-07!6;UBERON:0009034!1.67e-07!6;UBERON:0002095!1.67e-07!6;UBERON:0004782!1.67e-07!6;UBERON:0003281!1.67e-07!6;UBERON:0009664!1.67e-07!6;UBERON:0002296!1.67e-07!6;UBERON:0005602!1.67e-07!6;UBERON:0001179!1.67e-07!6;UBERON:0006293!1.67e-07!6;UBERON:0001474!3.39e-07!22;UBERON:0004765!3.39e-07!22;UBERON:0001434!3.39e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.97e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,2.68142840554502,2.19383093769182,3.39511721438424,0,0.496454756004426,2.61199789138935,0.95995453676044,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86569557567435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0,0.255457055208591,0.479260498023681,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.546776910884101,2.0590035588587,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01362607645082,0.821687657318618,0.389762468933385,0.358053391334963,0.198681354781265,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:104444189..104444213,+ | |||
}} |
Revision as of 18:28, 12 September 2013
Short description: | p@chr11:104444189..104444213, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104444189..104444213, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.82e-17 | 6 |
megakaryocyte | 2.82e-17 | 6 |
lymphocyte of B lineage | 1.20e-12 | 1 |
B cell | 1.20e-12 | 1 |
pro-B cell | 1.20e-12 | 1 |
megakaryocyte-erythroid progenitor cell | 9.30e-12 | 9 |
hematopoietic lineage restricted progenitor cell | 2.38e-11 | 25 |
hematopoietic cell | 6.56e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.56e-09 | 32 |
hematopoietic stem cell | 6.56e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.56e-09 | 32 |
myeloid lineage restricted progenitor cell | 2.45e-08 | 13 |
myeloid cell | 6.97e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.97e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.