FFCP PHASE1:Mm9::chr11:114851168..114851233,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=217305|HGNC=|MCL_coexpression_id=3|UniProt=Q8VCH2|association_with_transcript=0bp_to_NM_145437,uc007mgd.1_5end|description=CAGE_peak_1_at_Cd300ld_5end|id=chr11:114851168..114851233,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!6.51e-17!193;UBERON:0004120!6.51e-17!193;UBERON:0006603!6.51e-17!193;UBERON:0000466!1.50e-10!79;UBERON:0005172!5.27e-10!49;UBERON:0005173!5.27e-10!49;UBERON:0002417!5.27e-10!49;UBERON:0000916!5.27e-10!49;UBERON:0002365!1.20e-09!25;UBERON:0002330!1.20e-09!25;UBERON:0009569!3.45e-09!66;UBERON:0005177!4.91e-09!85;UBERON:0003104!5.34e-09!131;UBERON:0009142!5.34e-09!131;UBERON:0009854!7.54e-09!23;UBERON:0009856!7.54e-09!23;UBERON:0002107!1.22e-08!22;UBERON:0007499!1.22e-08!22;UBERON:0006925!1.22e-08!22;UBERON:0009497!1.22e-08!22;UBERON:0000015!1.22e-08!22;UBERON:0002423!1.22e-08!22;UBERON:0006235!1.22e-08!22;UBERON:0008835!1.22e-08!22;UBERON:0003894!1.22e-08!22;UBERON:0004161!1.22e-08!22;UBERON:0008836!1.22e-08!22;UBERON:0002405!1.85e-08!70;UBERON:0000077!2.37e-08!97;UBERON:0002100!1.05e-07!98;UBERON:0001041!1.68e-07!92;UBERON:0001048!5.81e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.11e-13,90;UBERON:0005177,1.25e-12,79;UBERON:0002365,2.98e-12,25;UBERON:0002330,2.98e-12,25;UBERON:0009854,3.68e-11,23;UBERON:0009856,3.68e-11,23;UBERON:0002107,7.16e-11,22;UBERON:0007499,7.16e-11,22;UBERON:0006925,7.16e-11,22;UBERON:0009497,7.16e-11,22;UBERON:0000015,7.16e-11,22;UBERON:0002423,7.16e-11,22;UBERON:0006235,7.16e-11,22;UBERON:0008835,7.16e-11,22;UBERON:0003894,7.16e-11,22;UBERON:0004161,7.16e-11,22;UBERON:0008836,7.16e-11,22;UBERON:0005172,1.12e-10,49;UBERON:0005173,1.12e-10,49;UBERON:0002417,1.12e-10,49;UBERON:0000916,1.12e-10,49;UBERON:0009569,1.61e-10,66;UBERON:0005256,6.61e-10,45;UBERON:0003104,3.95e-09,61;UBERON:0009142,3.95e-09,61;UBERON:0003914,2.24e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,6.99530499812892,7.28910962603373,0.699561878128147,7.5710919685977,8.22686601634433,11.8829102503448,1.87095238332354,0.198581902401771,0.261199789138935,0.319984845586813,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,216.380853090981,127.357661157379,119.363413626026,380.585772756066,374.308925757228,217.023127804926,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,18.4479442042687,7.9109309005358,17.7620028736525,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,2.02905142091174,15.487629785665,0,1.07940638327563,4.54843492213368,4.48026887097336,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.94112595522402,80.7886196979176,6.67989625791711,0.173485326766136,0,0.922461989024234,0.150722640552623,1.29347577849275,2.26199864393416,0,16.6289260457898,30.0767587662957,1.7794353494215,5.30019644304944,3.87900202508178,1.86391761218122,0,0.209446706813455,3.32094171771169,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.712875546952214,7.58882520721567,1.76905930903572,1.05220927943237,0,0.459804208866946,0,0.60281927134286,0.136072998302656,0.512454881139399,0.0937017245597288,1.29351685369508,0.215567992932842,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,1.4404749548556,0.199034266818493,0,0,0.284163499395593,0,0,0.540186184383045,0,0.787056926989615,0.617068451549513,0.465067889500816,0.268273401399619,0.233530684734339,1.6455984991348,4.26835406605648,4.53985333456792,8.18719929581861,18.8813099150304,11.541752013392,0,0.102904612379284,1.32167513193519,0.528901133327089,0.213288250535234,0,0.257734922644187,0,0.444756087689741,0.570676878337677,3.32170343081158,0.329397909448022,1.75934646160189,0.994782360205754,1.55971269695296,0.898819408654221,2.59365659849633,0.995706366271836,0.379335801906163,0.114248512609729,1.1270773567308,0,0,0.49095073923223,0.948548056863859,1.77132177575523,3.1399745568275,0.616985819609003,20.1587786419261,1.16791574001266,0.982794975566015,1.12431056192427,3.65148218499305,2.17059443777175,2.80088436959562,4.31544206176216,6.16113861745134,12.0807021802756,17.2521847832825,42.0519270865409,32.4519180039143,18.185679212192,17.4015491116255,15.4381926836277,20.1380977281599,0.189491411770485,0,0,0.234690248288502,0,0.476087281772027,0.585400943573396,5.35959489961049,6.42247599981447,2.55127629851979,10.3233888270915,16.4050732772601,7.81104916340163,72.3798162908507,73.4272673155258,3.44234991113325,6.07060841870411,0,0,0,3.02965112645248,0,0,0,0,0,0,0,0,0,0,4.68402281187286,0.35613120733451,0.651547837414304,5.93892442701128,2.65490276679926,0,0.604647113929502,0.377210159511796,0.295301892880773,1.22974059177571,2.06742634534577,1.81766864738753,4.63446591900138,3.47640433729398,4.21674434299995,4.12542172992747,1.02131881726136,0,0,0,0.177340233642274,0,0,0,1.64270195644597,0.42366414172764,0.441056796109924,3.46261131177108,0.968786560175433,1.93001359770099,1.90995750405018,0.984845398470368,1.45740418314925,0.927126510052548,17.2579589605831,4.12773735926445,22.9641213938442,2.26042148405629,5.05768642567793,4.34678529092393,0,0.69975726161829,1.24379976423981,0.954670618015114,0,0.813277868507395,0.324016022465404,0.209088296014469,0.436725127492355,0.944050424693745,3.88471241909079,2.35580347785627,2.46268449254406,1.86401793926078,0.56369293868419,0,0.165458490457098,0.583353565032143,0.258319646955462,0.844780627453891,0.58678619322877,0.2604087696879,0.419437377702843,0.483168241652012,0.576060012515731,1.89606672376907,0.202725215290164,0.308132871494482,0.129920822977795,0,0.79472541912506,0.961563596159751,0.590758108698309,1.41353029927407,0.381034033274999,0.201652370273681,1.46186821109629,1.25075394132428,0.935015217452552,2.0405734525369,0.221985953374065,0,0,5.02292944483695,9.94717119891265,4.94509385521616,10.2896821957952,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.838452650511929,0.367687016900028,0.222246727801615,0.824140228955577,0.962757628775446,0.252697211763798,0.50695859978048,0.754505365544305,0.655490552289177,0.640251524048693,0.631790158511746,0,0.463537303779422,0.192909220463705,0,0.441596760403192,1.02860775715625,1.59728225543404,0.715308569841963,1.0174249164263,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.964533054905707,0.249810577937946,2.10538447600868,1.28922632428979,1.72159498861959,4.19123696327079,5.56482805489012|short_description=p1@Cd300ld}} | ||
|EntrezGene=217305 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q8VCH2 | |||
|association_with_transcript=0bp_to_NM_145437,uc007mgd.1_5end | |||
|description=CAGE_peak_1_at_Cd300ld_5end | |||
|id=chr11:114851168..114851233,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.51e-17!193;UBERON:0004120!6.51e-17!193;UBERON:0006603!6.51e-17!193;UBERON:0000466!1.50e-10!79;UBERON:0005172!5.27e-10!49;UBERON:0005173!5.27e-10!49;UBERON:0002417!5.27e-10!49;UBERON:0000916!5.27e-10!49;UBERON:0002365!1.20e-09!25;UBERON:0002330!1.20e-09!25;UBERON:0009569!3.45e-09!66;UBERON:0005177!4.91e-09!85;UBERON:0003104!5.34e-09!131;UBERON:0009142!5.34e-09!131;UBERON:0009854!7.54e-09!23;UBERON:0009856!7.54e-09!23;UBERON:0002107!1.22e-08!22;UBERON:0007499!1.22e-08!22;UBERON:0006925!1.22e-08!22;UBERON:0009497!1.22e-08!22;UBERON:0000015!1.22e-08!22;UBERON:0002423!1.22e-08!22;UBERON:0006235!1.22e-08!22;UBERON:0008835!1.22e-08!22;UBERON:0003894!1.22e-08!22;UBERON:0004161!1.22e-08!22;UBERON:0008836!1.22e-08!22;UBERON:0002405!1.85e-08!70;UBERON:0000077!2.37e-08!97;UBERON:0002100!1.05e-07!98;UBERON:0001041!1.68e-07!92;UBERON:0001048!5.81e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.11e-13,90;UBERON:0005177,1.25e-12,79;UBERON:0002365,2.98e-12,25;UBERON:0002330,2.98e-12,25;UBERON:0009854,3.68e-11,23;UBERON:0009856,3.68e-11,23;UBERON:0002107,7.16e-11,22;UBERON:0007499,7.16e-11,22;UBERON:0006925,7.16e-11,22;UBERON:0009497,7.16e-11,22;UBERON:0000015,7.16e-11,22;UBERON:0002423,7.16e-11,22;UBERON:0006235,7.16e-11,22;UBERON:0008835,7.16e-11,22;UBERON:0003894,7.16e-11,22;UBERON:0004161,7.16e-11,22;UBERON:0008836,7.16e-11,22;UBERON:0005172,1.12e-10,49;UBERON:0005173,1.12e-10,49;UBERON:0002417,1.12e-10,49;UBERON:0000916,1.12e-10,49;UBERON:0009569,1.61e-10,66;UBERON:0005256,6.61e-10,45;UBERON:0003104,3.95e-09,61;UBERON:0009142,3.95e-09,61;UBERON:0003914,2.24e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,6.99530499812892,7.28910962603373,0.699561878128147,7.5710919685977,8.22686601634433,11.8829102503448,1.87095238332354,0.198581902401771,0.261199789138935,0.319984845586813,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,216.380853090981,127.357661157379,119.363413626026,380.585772756066,374.308925757228,217.023127804926,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,18.4479442042687,7.9109309005358,17.7620028736525,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,2.02905142091174,15.487629785665,0,1.07940638327563,4.54843492213368,4.48026887097336,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.94112595522402,80.7886196979176,6.67989625791711,0.173485326766136,0,0.922461989024234,0.150722640552623,1.29347577849275,2.26199864393416,0,16.6289260457898,30.0767587662957,1.7794353494215,5.30019644304944,3.87900202508178,1.86391761218122,0,0.209446706813455,3.32094171771169,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.712875546952214,7.58882520721567,1.76905930903572,1.05220927943237,0,0.459804208866946,0,0.60281927134286,0.136072998302656,0.512454881139399,0.0937017245597288,1.29351685369508,0.215567992932842,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,1.4404749548556,0.199034266818493,0,0,0.284163499395593,0,0,0.540186184383045,0,0.787056926989615,0.617068451549513,0.465067889500816,0.268273401399619,0.233530684734339,1.6455984991348,4.26835406605648,4.53985333456792,8.18719929581861,18.8813099150304,11.541752013392,0,0.102904612379284,1.32167513193519,0.528901133327089,0.213288250535234,0,0.257734922644187,0,0.444756087689741,0.570676878337677,3.32170343081158,0.329397909448022,1.75934646160189,0.994782360205754,1.55971269695296,0.898819408654221,2.59365659849633,0.995706366271836,0.379335801906163,0.114248512609729,1.1270773567308,0,0,0.49095073923223,0.948548056863859,1.77132177575523,3.1399745568275,0.616985819609003,20.1587786419261,1.16791574001266,0.982794975566015,1.12431056192427,3.65148218499305,2.17059443777175,2.80088436959562,4.31544206176216,6.16113861745134,12.0807021802756,17.2521847832825,42.0519270865409,32.4519180039143,18.185679212192,17.4015491116255,15.4381926836277,20.1380977281599,0.189491411770485,0,0,0.234690248288502,0,0.476087281772027,0.585400943573396,5.35959489961049,6.42247599981447,2.55127629851979,10.3233888270915,16.4050732772601,7.81104916340163,72.3798162908507,73.4272673155258,3.44234991113325,6.07060841870411,0,0,0,3.02965112645248,0,0,0,0,0,0,0,0,0,0,4.68402281187286,0.35613120733451,0.651547837414304,5.93892442701128,2.65490276679926,0,0.604647113929502,0.377210159511796,0.295301892880773,1.22974059177571,2.06742634534577,1.81766864738753,4.63446591900138,3.47640433729398,4.21674434299995,4.12542172992747,1.02131881726136,0,0,0,0.177340233642274,0,0,0,1.64270195644597,0.42366414172764,0.441056796109924,3.46261131177108,0.968786560175433,1.93001359770099,1.90995750405018,0.984845398470368,1.45740418314925,0.927126510052548,17.2579589605831,4.12773735926445,22.9641213938442,2.26042148405629,5.05768642567793,4.34678529092393,0,0.69975726161829,1.24379976423981,0.954670618015114,0,0.813277868507395,0.324016022465404,0.209088296014469,0.436725127492355,0.944050424693745,3.88471241909079,2.35580347785627,2.46268449254406,1.86401793926078,0.56369293868419,0,0.165458490457098,0.583353565032143,0.258319646955462,0.844780627453891,0.58678619322877,0.2604087696879,0.419437377702843,0.483168241652012,0.576060012515731,1.89606672376907,0.202725215290164,0.308132871494482,0.129920822977795,0,0.79472541912506,0.961563596159751,0.590758108698309,1.41353029927407,0.381034033274999,0.201652370273681,1.46186821109629,1.25075394132428,0.935015217452552,2.0405734525369,0.221985953374065,0,0,5.02292944483695,9.94717119891265,4.94509385521616,10.2896821957952,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.838452650511929,0.367687016900028,0.222246727801615,0.824140228955577,0.962757628775446,0.252697211763798,0.50695859978048,0.754505365544305,0.655490552289177,0.640251524048693,0.631790158511746,0,0.463537303779422,0.192909220463705,0,0.441596760403192,1.02860775715625,1.59728225543404,0.715308569841963,1.0174249164263,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.964533054905707,0.249810577937946,2.10538447600868,1.28922632428979,1.72159498861959,4.19123696327079,5.56482805489012 | |||
|short_description=p1@Cd300ld | |||
}} |
Revision as of 18:44, 12 September 2013
Short description: | p1@Cd300ld |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd300ld_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_NM_145437, uc007mgd.1_5end |
EntrezGene: | Cd300ld |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 8.11e-13 | 90 |
trunk region element | 1.25e-12 | 79 |
exocrine gland | 2.98e-12 | 25 |
exocrine system | 2.98e-12 | 25 |
digestive tract diverticulum | 3.68e-11 | 23 |
sac | 3.68e-11 | 23 |
liver | 7.16e-11 | 22 |
epithelial sac | 7.16e-11 | 22 |
digestive gland | 7.16e-11 | 22 |
epithelium of foregut-midgut junction | 7.16e-11 | 22 |
anatomical boundary | 7.16e-11 | 22 |
hepatobiliary system | 7.16e-11 | 22 |
foregut-midgut junction | 7.16e-11 | 22 |
hepatic diverticulum | 7.16e-11 | 22 |
liver primordium | 7.16e-11 | 22 |
septum transversum | 7.16e-11 | 22 |
liver bud | 7.16e-11 | 22 |
abdomen element | 1.12e-10 | 49 |
abdominal segment element | 1.12e-10 | 49 |
abdominal segment of trunk | 1.12e-10 | 49 |
abdomen | 1.12e-10 | 49 |
subdivision of trunk | 1.61e-10 | 66 |
trunk mesenchyme | 6.61e-10 | 45 |
mesenchyme | 3.95e-09 | 61 |
entire embryonic mesenchyme | 3.95e-09 | 61 |
epithelial tube | 2.24e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.