FFCP PHASE1:Hg19::chr2:65159748..65159759,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=400958|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-167bp_to_NR_036586_5end|coexpression_cluster_id=C782|description=CAGE_peak_3_at_LOC400958_5end|id=chr2:65159748..65159759,-|ontology_enrichment_celltype=CL:0000945!3.12e-68!24;CL:0000826!3.12e-68!24;CL:0000542!3.94e-32!53;CL:0000051!3.94e-32!53;CL:0000236!1.13e-29!14;CL:0000838!2.81e-29!52;CL:0002087!4.13e-18!119;CL:0002031!1.76e-15!124;CL:0000738!1.19e-14!140;CL:0002032!2.57e-14!165;CL:0000837!2.57e-14!165;CL:0000037!1.63e-13!172;CL:0000566!1.63e-13!172;CL:0000988!1.78e-12!182;CL:0000785!2.06e-11!2;CL:0000955!2.06e-11!2;CL:0000818!2.06e-11!2;CL:0000954!2.06e-11!2;CL:0000816!2.06e-11!2;CL:0000817!6.89e-08!3|ontology_enrichment_celltype_v019=CL:0000945;5.02e-74;24!CL:0000236;2.46e-49;13!CL:0000542;3.11e-23;53|ontology_enrichment_celltype_v019_2=CL:0000945,5.02e-74,24;CL:0000826,5.02e-74,24;CL:0000236,8.00e-46,14;CL:0000838,5.50e-34,52;CL:0000542,2.45e-33,53;CL:0000051,2.45e-33,53;CL:0002087,6.05e-15,115;CL:0002031,2.66e-14,120;CL:0000738,1.48e-12,136;CL:0002032,1.64e-10,161;CL:0000837,1.64e-10,161;CL:0000037,4.80e-10,168;CL:0000988,1.68e-09,177|ontology_enrichment_development_v019=CL:0000051;3.11e-23;53!UBERON:0001045;3.91e-19;1|ontology_enrichment_disease=DOID:0060058!1.57e-18!10;DOID:2531!8.00e-07!51;DOID:0060083!8.00e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!8.44e-16!3;UBERON:0004854!8.44e-16!3;UBERON:0009034!8.44e-16!3;UBERON:0002095!8.44e-16!3;UBERON:0004782!8.44e-16!3;UBERON:0003281!8.44e-16!3;UBERON:0009664!8.44e-16!3;UBERON:0002296!8.44e-16!3;UBERON:0005602!8.44e-16!3;UBERON:0001179!8.44e-16!3;UBERON:0006293!8.44e-16!3;UBERON:0004177!4.80e-07!7;UBERON:0001154!8.67e-07!1;UBERON:0001153!8.67e-07!1|ontology_enrichment_uberon_v019=UBERON:0001154;3.91e-19;1!UBERON:0001153;3.91e-19;1!UBERON:0009854;3.91e-19;1|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.91e-19,1;UBERON:0001153,3.91e-19,1;UBERON:0001045,3.91e-19,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.13461532569859,3.30585281517453,0,0,0,0,0,0,0.852139206383318,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,4.00395987036012,1.14950487990897,0.661044872784862,3.81621501814146,1.70763890732835,1.76171156811282,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,0.738508832766417,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.395223263795889,4.26274094333136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p3@LOC400958}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=400958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-167bp_to_NR_036586_5end | |||
|coexpression_cluster_id=C782 | |||
|description=CAGE_peak_3_at_LOC400958_5end | |||
|id=chr2:65159748..65159759,- | |||
|ontology_enrichment_celltype=CL:0000945!3.12e-68!24;CL:0000826!3.12e-68!24;CL:0000542!3.94e-32!53;CL:0000051!3.94e-32!53;CL:0000236!1.13e-29!14;CL:0000838!2.81e-29!52;CL:0002087!4.13e-18!119;CL:0002031!1.76e-15!124;CL:0000738!1.19e-14!140;CL:0002032!2.57e-14!165;CL:0000837!2.57e-14!165;CL:0000037!1.63e-13!172;CL:0000566!1.63e-13!172;CL:0000988!1.78e-12!182;CL:0000785!2.06e-11!2;CL:0000955!2.06e-11!2;CL:0000818!2.06e-11!2;CL:0000954!2.06e-11!2;CL:0000816!2.06e-11!2;CL:0000817!6.89e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.02e-74;24!CL:0000236;2.46e-49;13!CL:0000542;3.11e-23;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.02e-74,24;CL:0000826,5.02e-74,24;CL:0000236,8.00e-46,14;CL:0000838,5.50e-34,52;CL:0000542,2.45e-33,53;CL:0000051,2.45e-33,53;CL:0002087,6.05e-15,115;CL:0002031,2.66e-14,120;CL:0000738,1.48e-12,136;CL:0002032,1.64e-10,161;CL:0000837,1.64e-10,161;CL:0000037,4.80e-10,168;CL:0000988,1.68e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;3.11e-23;53!UBERON:0001045;3.91e-19;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.57e-18!10;DOID:2531!8.00e-07!51;DOID:0060083!8.00e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.44e-16!3;UBERON:0004854!8.44e-16!3;UBERON:0009034!8.44e-16!3;UBERON:0002095!8.44e-16!3;UBERON:0004782!8.44e-16!3;UBERON:0003281!8.44e-16!3;UBERON:0009664!8.44e-16!3;UBERON:0002296!8.44e-16!3;UBERON:0005602!8.44e-16!3;UBERON:0001179!8.44e-16!3;UBERON:0006293!8.44e-16!3;UBERON:0004177!4.80e-07!7;UBERON:0001154!8.67e-07!1;UBERON:0001153!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.91e-19;1!UBERON:0001153;3.91e-19;1!UBERON:0009854;3.91e-19;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.91e-19,1;UBERON:0001153,3.91e-19,1;UBERON:0001045,3.91e-19,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.13461532569859,3.30585281517453,0,0,0,0,0,0,0.852139206383318,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,4.00395987036012,1.14950487990897,0.661044872784862,3.81621501814146,1.70763890732835,1.76171156811282,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,0.738508832766417,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.395223263795889,4.26274094333136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@LOC400958 | |||
}} |
Revision as of 19:19, 12 September 2013
Short description: | p3@LOC400958 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC400958_5end |
Coexpression cluster: | C782_B_Burkitt_lymphoma_splenic_acute_CD19_xeroderma |
Association with transcript: | -167bp_to_NR_036586_5end |
EntrezGene: | LOC400958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.02e-74 | 24 |
pro-B cell | 5.02e-74 | 24 |
B cell | 8.00e-46 | 14 |
lymphoid lineage restricted progenitor cell | 5.50e-34 | 52 |
lymphocyte | 2.45e-33 | 53 |
common lymphoid progenitor | 2.45e-33 | 53 |
nongranular leukocyte | 6.05e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.66e-14 | 120 |
leukocyte | 1.48e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-10 | 161 |
hematopoietic stem cell | 4.80e-10 | 168 |
hematopoietic cell | 1.68e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.91e-19 | 1 |
caecum | 3.91e-19 | 1 |
midgut | 3.91e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.